BAC Information

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BAC

Clone NameB6Ng01-030F17
Chromosome13 (Build37)
Map Location 107,856,062 - 107,995,808
singlet/doubletdoublet
Overlap genenone
Upstream geneOlfr717-ps1, LOC631097, EG620949, Ipo11, Dimt1, Kif2a, LOC100040322
Downstream geneLOC100040350, LOC100040366, Apoo, AI197445, LOC100040820, Zswim6, 3021401N23Rik, 2810008M24Rik, Ndufa12l, Ercc8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030F17.bB6Ng01-030F17.g
ACCDH860292DH860293
length1,100890
definitionDH860292|Mus musculus domesticus DNA, BAC clone: B6Ng01-030F17, 5' end.DH860293|Mus musculus domesticus DNA, BAC clone: B6Ng01-030F17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,994,701 - 107,995,808)(107,856,062 - 107,856,950)
sequence
gaattccatgtacccacacagatatctagaacctcctgacttagagaaca
attcttacccacacagtccccaaaaaacaaatgaaaaaaggaactgatta
gatggccttgatttatttacattggtcccattttctctcacacacacaca
ccctagtccatctctgtaaaagaatatgaaggttatttttacttgaaagg
gttgaaccttgggtgcttactatcagcatttcttattgtttttataccta
caaaatagatctatatctcagggcatttgaaatgtgggagtgtgagtttc
ttttcccaacagaaaaataataaattctgggtcactagaaggaagacatt
tcaaaagtgtgtactacatgaaggttgttatttattgagatctagaagag
ccagaatgattcagagcaattaagatatcaatagagacagctctaattct
ctggaggttttttggatgaattagagaagcatcctggtttgacttatttg
tccatccatgtgtttaattagttccactaggcaacaacaaaacaaattct
ttgtagaatgctcattagatcttcagggtcctaggataactttatgttaa
aacagccatccacagaaacacaaaataataaattctgtcattggggtcta
actggttgagggcaaaaacacaccatgcatttgaccagtggtctagctca
gtggaaaaattcctgtctagcatttgtgaaacccaaggtttcaatcctag
tgccacaaaaacaaactgaataagaagaaacaaactaattgtgtattata
agcatttgtatacaaaattcaaaatcttatcagacatgataaggttacaa
aacataaatctcatcaattaagcagaaagcatccaaataagaacatttag
aatggagcatgctgggagaaatggcgacatgaggtcagacacctttcccc
tttcaccatatatctacttaagagacgtgtttgactgctggcagtgacct
tcacccccagtttgactccacctcttttccaggtagctctcactttatat
gggcagtagtaactcagcaattaaacctcaataaatatcttgtgtgattc

gaattctctgttttttcttccttgtactgatttctgaacaccaaacatct
cacatcatcttggcaattgcttctacaaaacccaaactttgacacccata
aagcaattcacttttaaggcagttttacctttgtgaaggcataacccctt
atctgtcacttgaaggtagaatatatatgtatattatatacttgtaatta
atatataggcagaatacacataaatatataagtaaattatatgaaataag
tatatataataattatataggaagatcagtttcatggatgtttaatagta
aaatgctgtatattaaaatgtgtcaattaattccataccagaaacaattc
ctttctcatttcaatgtttactaaagtatagtgaatgtttattaaacaat
aagctccccttttctggctttttcatttgtcttggctttccagtcttttg
cctgtttggtcaaggttactccaagatattttatagtatttgaagctact
ttgaaaagtggtattcccctaacagttcatttgtcagtggtatataggaa
agctactgaatttcgtgagttaactttatatccagctactttgccgaaag
tgtttatcagatataaggatttcctattgaaatttctagggtcatttatg
tatagtatcatctcatctgcaaataaagatactttgacttcttcctttcc
aatttgtatcccttgatctccttcagttatctagttaagactactagtta
agggctggtgagatggcttagcggttaagagcactgactgcctcttctga
aggtcctgagttcaaatcccagcaaccacatggtggctcacaaccatcca
taacgagatctgactccctcttctggtgtgtctgaagaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_107994701_107995808
seq2: B6Ng01-030F17.b_47_1146 (reverse)

seq1  GAATCTACACAAGATTATTTATTGAGGTTTAATTGCTGATGTTTACTTAT  50
      ||||| |||||||| ||||||||||||||||||||||||   |||| || 
seq2  GAATC-ACACAAGA-TATTTATTGAGGTTTAATTGCTGA--GTTAC-TAC  45

seq1  TGACCATATAAGTTGAGAGCTACCTGGAAAAGAGGT-GAGTCAAACTGTG  99
      || ||||||||  ||||||||||||||||||||||| ||||||||||| |
seq2  TGCCCATATAAAGTGAGAGCTACCTGGAAAAGAGGTGGAGTCAAACTGGG  95

seq1  GGTG-AGGTCACTGCCAGCAGTCAAAACACGTTCTCTTAAAGTAGATATT  148
      |||| |||||||||||||||||| ||||||| |||||| ||||||||| |
seq2  GGTGAAGGTCACTGCCAGCAGTC-AAACACG-TCTCTT-AAGTAGATA-T  141

seq1  ATGGTGAAAGGGGAAAGGTGTCTGACCTCATGTTCGCCATTTCTCCCAGC  198
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATGGTGAAAGGGGAAAGGTGTCTGACCTCATG-TCGCCATTTCTCCCAGC  190

seq1  ATGCT-CATTCTAAATGTTCTTATTTTGGATGCTTTCTGCTTAATTGATG  247
      ||||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATGCTCCATTCTAAATGTTCTTA-TTTGGATGCTTTCTGCTTAATTGATG  239

seq1  AGATTTATTGTTTTGTAA-CTTATCATGTCTGATAAGATTTTGAATTTTG  296
      ||||||| |||||||||| |||||||||||||||||||||||||||||||
seq2  AGATTTA-TGTTTTGTAACCTTATCATGTCTGATAAGATTTTGAATTTTG  288

seq1  TATACAAATGCTTATAATACACAATTAGTTTGTTTCTTCTTATTCAGTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAATGCTTATAATACACAATTAGTTTGTTTCTTCTTATTCAGTTT  338

seq1  GTTTTTGTGGCACTAGGATTTGAACCTTGGGTTTCACAAATGCTAGACAG  396
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  GTTTTTGTGGCACTAGGATTGAAACCTTGGGTTTCACAAATGCTAGACAG  388

seq1  GAATTTTTCCACTGAGCTAGACCACTGGTCAAATGCATGGTGTGTTTTTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTCCACTGAGCTAGACCACTGGTCAAATGCATGGTGTGTTTTTG  438

seq1  CCCTCAACCAGTTAGACCCCAATGACAGAATTTATTATTTTGTGTTTCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAACCAGTTAGACCCCAATGACAGAATTTATTATTTTGTGTTTCTG  488

seq1  TGGATGGCTGTTTTAACATAAAGTTATCCTAGGACCCTGAAGATCTAATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGCTGTTTTAACATAAAGTTATCCTAGGACCCTGAAGATCTAATG  538

seq1  AGCATTCTACAAAGAATTTGTTTTGTTGTTGCCTAGTGGAACTAATTAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCTACAAAGAATTTGTTTTGTTGTTGCCTAGTGGAACTAATTAAA  588

seq1  CACATGGATGGACAAATAAGTCAAACCAGGATGCTTCTCTAATTCATCCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGATGGACAAATAAGTCAAACCAGGATGCTTCTCTAATTCATCCA  638

seq1  AAAAACCTCCAGAGAATTAGAGCTGTCTCTATTGATATCTTAATTGCTCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCTCCAGAGAATTAGAGCTGTCTCTATTGATATCTTAATTGCTCT  688

seq1  GAATCATTCTGGCTCTTCTAGATCTCAATAAATAACAACCTTCATGTAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATTCTGGCTCTTCTAGATCTCAATAAATAACAACCTTCATGTAGT  738

seq1  ACACACTTTTGAAATGTCTTCCTTCTAGTGACCCAGAATTTATTATTTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTTTTGAAATGTCTTCCTTCTAGTGACCCAGAATTTATTATTTTT  788

seq1  CTGTTGGGAAAAGAAACTCACACTCCCACATTTCAAATGCCCTGAGATAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGGAAAAGAAACTCACACTCCCACATTTCAAATGCCCTGAGATAT  838

seq1  AGATCTATTTTGTAGGTATAAAAACAATAAGAAATGCTGATAGTAAGCAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTATTTTGTAGGTATAAAAACAATAAGAAATGCTGATAGTAAGCAC  888

seq1  CCAAGGTTCAACCCTTTCAAGTAAAAATAACCTTCATATTCTTTTACAGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTTCAACCCTTTCAAGTAAAAATAACCTTCATATTCTTTTACAGA  938

seq1  GATGGACTAGGGTGTGTGTGTGTGAGAGAAAATGGGACCAATGTAAATAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGACTAGGGTGTGTGTGTGTGAGAGAAAATGGGACCAATGTAAATAA  988

seq1  ATCAAGGCCATCTAATCAGTTCCTTTTTTCATTTGTTTTTTGGGGACTGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGCCATCTAATCAGTTCCTTTTTTCATTTGTTTTTTGGGGACTGT  1038

seq1  GTGGGTAAGAATTGTTCTCTAAGTCAGGAGGTTCTAGATATCTGTGTGGG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTAAGAATTGTTCTCTAAGTCAGGAGGTTCTAGATATCTGTGTGGG  1088

seq1  TACATGGAATTC  1108
      ||||||||||||
seq2  TACATGGAATTC  1100

seq1: chr13_107856062_107856950
seq2: B6Ng01-030F17.g_70_959

seq1  GAATTCTCTGTTTTTTCTTCCTTGTACTGATTTCTGAACACCAAACATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTTTTCTTCCTTGTACTGATTTCTGAACACCAAACATCT  50

seq1  CACATCATCTTGGCAATTGCTTCTACAAAACCCAAACTTTGACACCCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCATCTTGGCAATTGCTTCTACAAAACCCAAACTTTGACACCCATA  100

seq1  AAGCAATTCACTTTTAAGGCAGTTTTACCTTTGTGAAGGCATAACCCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATTCACTTTTAAGGCAGTTTTACCTTTGTGAAGGCATAACCCCTT  150

seq1  ATCTGTCACTTGAAGGTAGAATATATATGTATATTATATACTTGTAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCACTTGAAGGTAGAATATATATGTATATTATATACTTGTAATTA  200

seq1  ATATATAGGCAGAATACACATAAATATATAAGTAAATTATATGAAATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAGGCAGAATACACATAAATATATAAGTAAATTATATGAAATAAG  250

seq1  TATATATAATAATTATATAGGAAGATCAGTTTCATGGATGTTTAATAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAATAATTATATAGGAAGATCAGTTTCATGGATGTTTAATAGTA  300

seq1  AAATGCTGTATATTAAAATGTGTCAATTAATTCCATACCAGAAACAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTGTATATTAAAATGTGTCAATTAATTCCATACCAGAAACAATTC  350

seq1  CTTTCTCATTTCAATGTTTACTAAAGTATAGTGAATGTTTATTAAACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCATTTCAATGTTTACTAAAGTATAGTGAATGTTTATTAAACAAT  400

seq1  AAGCTCCCCTTTTCTGGCTTTTTCATTTGTCTTGGCTTTCCAGTCTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCCCTTTTCTGGCTTTTTCATTTGTCTTGGCTTTCCAGTCTTTTG  450

seq1  CCTGTTTGGTCAAGGTTACTCCAAGATATTTTATAGTATTTGAAGCTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGGTCAAGGTTACTCCAAGATATTTTATAGTATTTGAAGCTACT  500

seq1  TTGAAAAGTGGTATTCCCCTAACAGTTCATTTGTCAGTGGTATATAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGTGGTATTCCCCTAACAGTTCATTTGTCAGTGGTATATAGGAA  550

seq1  AGCTACTGAATTTCGTGAGTTAACTTTATATCCAGCTACTTTGCCGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACTGAATTTCGTGAGTTAACTTTATATCCAGCTACTTTGCCGAAAG  600

seq1  TGTTTATCAGATATAAGGATTTCCTATTGAAATTTCTAGGGTCATTTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATCAGATATAAGGATTTCCTATTGAAATTTCTAGGGTCATTTATG  650

seq1  TATAGTATCATCTCATCTGCAAATAAAGATACTTTGACTTCTTCCTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTATCATCTCATCTGCAAATAAAGATACTTTGACTTCTTCCTTTCC  700

seq1  AATTTGTATCCCTTGATCTCCTTCAGTTATCTAGTTAAGACTACTAGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTATCCCTTGATCTCCTTCAGTTATCTAGTTAAGACTACTAGTTA  750

seq1  AGGGCTGGTGAGATGGCTTAGCGGTTAAGAGCACTGACTG-CTCTTCTGA  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGGGCTGGTGAGATGGCTTAGCGGTTAAGAGCACTGACTGCCTCTTCTGA  800

seq1  AGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCA  850

seq1  TAACGAGATCTGACTCCCTCTTCTGGTGTGTCTGAAGACA  889
      ||||||||||||||||||||||||||||||||||||||||
seq2  TAACGAGATCTGACTCCCTCTTCTGGTGTGTCTGAAGACA  890