BAC Information

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BAC

Clone NameB6Ng01-031A03
Chromosome13 (Build37)
Map Location 50,381,456 - 50,549,770
singlet/doubletdoublet
Overlap geneLOC676954, LOC667625, LOC667632, EG667637, Fbxw17
Upstream geneFgd3, Bicd2, Ippk, Cenpp, Tes3-ps, Ecm2, Aspn, Omd, Ogn, Nol8, Iars, LOC667488, LOC670357, EG638833, Gm272, EG667503, EG667507, LOC100040099, LOC625110, LOC676907, LOC667546, LOC667552, LOC100040085, LOC100040159, LOC100040176, LOC100040118, Gm906, 2310081J21Rik
Downstream geneGm806, EG639044, Gm904, LOC100040315, EG667693, LOC100040161, LOC100040190, EG667712, LOC676997, EG667717, Spin1, 4930519N16Rik, EG667728, LOC667733, Ppia-ps13_636.1, LOC625524, Edg3, Shc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031A03.bB6Ng01-031A03.g
ACCDH860743DH860744
length681565
definitionDH860743|Mus musculus domesticus DNA, BAC clone: B6Ng01-031A03, 5' end.DH860744|Mus musculus domesticus DNA, BAC clone: B6Ng01-031A03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,549,091 - 50,549,770)(50,381,456 - 50,382,026)
sequence
gaattcatagctcctatggaatttgtacacatttgaggacaagggaatgt
ctcttgcatcttgccagcaatgacaagacaaagtatttactagactagaa
tttatgttaaaagttttaataaagaatcccccctaccatgggcagaagca
aactgggtaaagcacacccaggagagagaataggcccttttttgacagtt
aggatatagggtggtttggttttgtctttggagttgatgtgaaattacac
aggtgctcagattctgcatcctgcacatttcattctattgccttgtggtt
gggagagagtgggatgtaaaagtatttaatattctctctctattaattag
tgctggaaattaataatacagcagcagttatcccttgactagctagttct
cccccatccccaaatcacatagaaaccttttaatatttcaaagctcttct
taactagctcagcccgaccacttagtcccgtcctgcatgtggctagctat
atcttccaggcctgtagtcatgtctatctcccttcatgtctcctctcaaa
aatccttcctcttctttttagagttcctttttccctctcaggaagtctca
ccacctatttctctaatcacatcttagagagatagccaatcacaggcttt
agctttcattccagttaaactgggggagcaa
atatttctctcaacaattaactaaagaggagtagaggaagaaccaggtct
cctagtaatccccacttctcaacatagacacattggacacctattctctg
ctatgaacgaaggcaggctgacactgtgatggtctggagatcccacactc
agagcccaggctatgagtcaggcctgttagagactctttcctcagagtcc
acagaccaggaggtgcctgggaaggaattttatctaagtatctttctggg
tacctaaaaaccagggcaaggcttttgaaaacagactttgattaccttgt
gtgatcccagatttatatgtacatataagaaactcctgaggacatagtga
caggtcctgctgcactggctagtgcatacacattgagtctactgtgtgcc
caggcctgagggttagacaaaaagttatgccagcctgaagggagttccag
atgcctcccacataggaacaaaatgtttattgctcctgactgagaagtgc
cattgcatcttggaatcttgaattatgcagtgtgcgtgtgtgaatgtgca
tgtggttttgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_50549091_50549770
seq2: B6Ng01-031A03.b_45_725 (reverse)

seq1  TTGCT-CCCCAGTTTAACTGGAATGAAAGCTAAAGCCTGTGATTGGCTAT  49
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCCCCAGTTTAACTGGAATGAAAGCTAAAGCCTGTGATTGGCTAT  50

seq1  CTCTCTAAGATGTGATTAGAGAAATAGGTGGTGAGACTTCCTGAGAGGGA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTAAGATGTGATTAGAGAAATAGGTGGTGAGACTTCCTGAGAGGGA  100

seq1  AAAAGGAACTCTAAAAAGAAGAGGAAGGATTTTTGAGAGGAGACATGAAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAACTCTAAAAAGAAGAGGAAGGATTTTTGAGAGGAGACATGAAG  150

seq1  GGAGATAGACATGACTACAGGCCTGGAAGATATAGCTAGCCACATGCAGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATAGACATGACTACAGGCCTGGAAGATATAGCTAGCCACATGCAGG  200

seq1  ACGGGACTAAGTGGTCGGGCTGAGCTAGTTAAGAAGAGCTTTGAAATATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGACTAAGTGGTCGGGCTGAGCTAGTTAAGAAGAGCTTTGAAATATT  250

seq1  AAAAGGTTTCTATGTGATTTGGGGATGGGGGAGAACTAGCTAGTCAAGGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTTTCTATGTGATTTGGGGATGGGGGAGAACTAGCTAGTCAAGGG  300

seq1  ATAACTGCTGCTGTATTATTAATTTCCAGCACTAATTAATAGAGAGAGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGCTGCTGTATTATTAATTTCCAGCACTAATTAATAGAGAGAGAA  350

seq1  TATTAAATACTTTTACATCCCACTCTCTCCCAACCACAAGGCAATAGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATACTTTTACATCCCACTCTCTCCCAACCACAAGGCAATAGAAT  400

seq1  GAAATGTGCAGGATGCAGAATCTGAGCACCTGTGTAATTTCACATCAACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTGCAGGATGCAGAATCTGAGCACCTGTGTAATTTCACATCAACT  450

seq1  CCAAAGACAAAACCAAACCACCCTATATCCTAACTGTCAAAAAAGGGCCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGACAAAACCAAACCACCCTATATCCTAACTGTCAAAAAAGGGCCT  500

seq1  ATTCTCTCTCCTGGGTGTGCTTTACCCAGTTTGCTTCTGCCCATGGTAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTCTCCTGGGTGTGCTTTACCCAGTTTGCTTCTGCCCATGGTAGG  550

seq1  GGGGATTCTTTATTAAAACTTTTAACATAAATTCTAGTCTAGTAAATACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTCTTTATTAAAACTTTTAACATAAATTCTAGTCTAGTAAATACT  600

seq1  TTGTCTTGTCATTGCTGGCAAGATGCAAGAGACATTCCCTTGTCCTCAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTGTCATTGCTGGCAAGATGCAAGAGACATTCCCTTGTCCTCAAA  650

seq1  TGTGTACAAATTCCATAGGAGCTATGAATTC  680
      |||||||||||||||||||||||||||||||
seq2  TGTGTACAAATTCCATAGGAGCTATGAATTC  681

seq1: chr13_50381456_50382026
seq2: B6Ng01-031A03.g_67_637

seq1  GAATTCATATTTCTCTCAACAATTAACTAAAGAGGAGTAGAGGAAGAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTTCTCTCAACAATTAACTAAAGAGGAGTAGAGGAAGAACC  50

seq1  AGGTCTCCTAGTAATCCCCACTTCTCAACATAGACACATTGGACACCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCCTAGTAATCCCCACTTCTCAACATAGACACATTGGACACCTAT  100

seq1  TCTCTGCTATGAACGAAGGCAGGCTGACACTGTGATGGTCTGGAGATCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTATGAACGAAGGCAGGCTGACACTGTGATGGTCTGGAGATCCC  150

seq1  ACACTCAGAGCCCAGGCTATGAGTCAGGCCTGTTAGAGACTCTTTCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGAGCCCAGGCTATGAGTCAGGCCTGTTAGAGACTCTTTCCTCA  200

seq1  GAGTCCACAGACCAGGAGGTGCCTGGGAAGGAATTTTATCTAAGTATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCACAGACCAGGAGGTGCCTGGGAAGGAATTTTATCTAAGTATCTT  250

seq1  TCTGGGTACCTAAAAACCAGGGCAAGGCTTTTGAAAACAGACTTTGATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTACCTAAAAACCAGGGCAAGGCTTTTGAAAACAGACTTTGATTA  300

seq1  CCTTGTGTGATCCCAGATTTATATGTACATATAAGAAACTCCTGAGGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGTGATCCCAGATTTATATGTACATATAAGAAACTCCTGAGGACA  350

seq1  TAGTGACAGGTCCTGCTGCACTGGCTAGTGCATACACATTGAGTCTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGACAGGTCCTGCTGCACTGGCTAGTGCATACACATTGAGTCTACTG  400

seq1  TGTGCCCAGGCCTGAGGGTTAGACAAAAAGTTATGCCAGCCTGAAGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCAGGCCTGAGGGTTAGACAAAAAGTTATGCCAGCCTGAAGGGAG  450

seq1  TTCCAGATGCCTCCCACATAGGAACAAAATGTTTATTGCTCCTGACTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATGCCTCCCACATAGGAACAAAATGTTTATTGCTCCTGACTGAG  500

seq1  AAGTGCCATTGCATCTTGGAATCTTGAATTATGCAGTGTGCGTGTGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCATTGCATCTTGGAATCTTGAATTATGCAGTGTGCGTGTGTGAA  550

seq1  TGTGCATGTGGTTTTGTGTGT  571
      |||||||||||||||||||||
seq2  TGTGCATGTGGTTTTGTGTGT  571