BAC Information

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BAC

Clone NameB6Ng01-031F15
Chromosome13 (Build37)
Map Location 13,624,936 - 13,773,428
singlet/doubletdoublet
Overlap geneLyst
Upstream geneEro1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1
Downstream geneLOC100039831, Gng4, EG665000, EG665008, LOC630894, LOC100040205, B3galnt2, Tbce, Ggps1, LOC100040243, Arid4b, LOC100039916, Hecw1, Mrpl32, Psma2, AW209491
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031F15.bB6Ng01-031F15.g
ACCDH860993DH860994
length1,117992
definitionDH860993|Mus musculus domesticus DNA, BAC clone: B6Ng01-031F15, 5' end.DH860994|Mus musculus domesticus DNA, BAC clone: B6Ng01-031F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,772,298 - 13,773,428)(13,624,936 - 13,625,941)
sequence
gaattcttaattacaaaaagattacagtttacaataagacaaaatctaag
ataaatgcataaacacttaggtgcatacatatacaatttcataacttcag
tggactcatttgaatgcatccattggcaatcttgtgtccaaaaaatgcct
gctgtgtgggactataacaagtgtaaagaaaaattattagtttacaaact
atcttcgtgacagtgaactagtaaaaatagctatcaaaaacgaacaaacc
tctcactcctgacctaaaacgacctgcctccgtggtgtagcagtttaagt
atttcgtggcgacacgcacacataagggcctggatttgattgatcaccag
caatacacacacatacataaagtgaacacagtaaataatttaagtccacc
aaggtctgaattgctctaccacaccaaagatgtatatatttttctctatc
aaacagaaaaaaaattgtgccaaactgttagtttcagtgaactttttctt
ttatctttgcacatattgttagtccttaagaattattacaaagtcaaatc
taaggaatcagcaacacactcaggaattccaagagaaggctctaagggac
cgagggtgtctcggacgggtcacaaataccgcatcactgagattacaggg
gccacctttctttcaggtagcttctcatgttagtactacatgtcaaatct
tctctgtcactttcattttctactgcagttattagtttccagtttctaaa
tagtgaataaagtacagaggaagaagtaataagagaaagaacatcaaatg
taaaataacaaatcaattctctgggagatgatttatagcagacctttttc
tgagacccaaaatagtcactaaattttatacttaagacaaaggatctgaa
ttatggtgtagagaactcactcttcatccaggccaatcggtcgaccaaag
aacatttcaacaaagcactccaacacttctgagttccctatgaagataca
actggttggctataggaaagccacggttctcagaaacttgtcctttgctc
tttgatgctctataatgtatgcatgtaaagctaaggaaaaaattgagtgt
acatttaataatacaat
gaattcactctgagccagtacatgcaagccctcagcacaggccaaagggt
gtggtgtattcttggacatcctcatctattagcaccatcttaacaggatt
atcaaactagcttagttctggaacatcgatacctgtttgggacctacgtc
tgatctgactgatgcctctagcttttgctttccagatatagcaagcgcac
caatggactaggctgagatgtgctgacacaaactttaggccagagttttt
gtcaatgtgatgcagacccagacatatctgtgaagaatctcaactgaaga
acttctcccatcaggttggcctatgggtaagccagtagggcattttgtta
attgctaattggtaccggagggcctatcctaccagggataggctgtgcca
tctctggacagctgggcctgggctctacaggaaagtagctgaggagctgt
ggggaggaaggcagtaagcagtgttccttcatggcctctgcttcacttcc
tgcctccaggaccccgtcttgagctcctgtcctggggtctcatgatgatg
ggcagtaacctgtaaggtgaaataagcactttccagcccaggttgctttg
ggtaatgtttatcccagcaacagaaacctaactaggacgttccacctagg
cgtatctctgtgagcacaggaaaccaaacccttccccactcctctcctga
tgggaagaagctcttgaatttcttgtgactattttccagtgtgctgcatt
caggatcacttccttgttctagaaactgggcatgggagtgtgtagacatg
attctgtcaaaacacctagaagagggcatgggcttgcatgaacatgcatg
cgtatatctttgcatgcacacaggcatacacacatgtgtccatgtgagca
cgcgtgatcccatcctgtggctgcagagtccttctgtgacttcacttcat
gactctactcagtctagctgtgcagcttgttcactttggcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_13772298_13773428
seq2: B6Ng01-031F15.b_47_1163 (reverse)

seq1  ATTGTATATATTAAATGTTAACATCTAAATTTTTTTCTTTAGCTGTTACA  50
      ||||||| ||||||||||  ||| || || ||||||| |||||| |||||
seq2  ATTGTAT-TATTAAATGT--ACA-CTCAA-TTTTTTCCTTAGCT-TTACA  44

seq1  TGCATACATTAATAGAGCATCAAAGGAGCAAAAGGACAAGTTTCTGAAGA  100
      |||||||||| ||||||||||||| |||| |||||||||||||||| |||
seq2  TGCATACATT-ATAGAGCATCAAA-GAGC-AAAGGACAAGTTTCTG-AGA  90

seq1  ACCGTGGCTTTTCCTTATTAGCCAACCAGTTGTATCTTCATAGGGGAACT  150
      |||||||| ||||||   |||||||||||||||||||||||| |||||||
seq2  ACCGTGGC-TTTCCT--ATAGCCAACCAGTTGTATCTTCATA-GGGAACT  136

seq1  CAGGAGTTGTTGGAGTGCTTTGTTGAAATGTTCTTTGGTCGACCGATTGG  200
      ||| || |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAG-TGTTGGAGTGCTTTGTTGAAATGTTCTTTGGTCGACCGATTGG  185

seq1  CCTGGATGAAGAGTGAGTTCTCTACACCATAATTCAGATCCTTTGTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATGAAGAGTGAGTTCTCTACACCATAATTCAGATCCTTTGTCTTA  235

seq1  AGTATAAAATTTAGTGACTATTTTGGGTCTCAG-AAAAGGTCTGCTATAA  299
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGTATAAAATTTAGTGACTATTTTGGGTCTCAGAAAAAGGTCTGCTATAA  285

seq1  ATCATCTCCCAGAGAATTGATTTGTTATTTTACATTTGATGTTCTTTCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTCCCAGAGAATTGATTTGTTATTTTACATTTGATGTTCTTTCTC  335

seq1  TTATTACTTCTTCCTCTGTACTTTATTCACTATTTAGAAACTGGAAACTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACTTCTTCCTCTGTACTTTATTCACTATTTAGAAACTGGAAACTA  385

seq1  ATAACTGCAGTAGAAAATGAAAGTGACAGAGAAGATTTGACATGTAGTAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGCAGTAGAAAATGAAAGTGACAGAGAAGATTTGACATGTAGTAC  435

seq1  TAACATGAGAAGCTACCTGAAAGAAAGGTGGCCCCTGTAATCTCAGTGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGAGAAGCTACCTGAAAGAAAGGTGGCCCCTGTAATCTCAGTGAT  485

seq1  GCGGTATTTGTGACCCGTCCGAGACACCCTCGGTCCCTTAGAGCCTTCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTATTTGTGACCCGTCCGAGACACCCTCGGTCCCTTAGAGCCTTCTC  535

seq1  TTGGAATTCCTGAGTGTGTTGCTGATTCCTTAGATTTGACTTTGTAATAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTCCTGAGTGTGTTGCTGATTCCTTAGATTTGACTTTGTAATAA  585

seq1  TTCTTAAGGACTAACAATATGTGCAAAGATAAAAGAAAAAGTTCACTGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAGGACTAACAATATGTGCAAAGATAAAAGAAAAAGTTCACTGAA  635

seq1  ACTAACAGTTTGGCACAATTTTTTTTCTGTTTGATAGAGAAAAATATATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAGTTTGGCACAATTTTTTTTCTGTTTGATAGAGAAAAATATATA  685

seq1  CATCTTTGGTGTGGTAGAGCAATTCAGACCTTGGTGGACTTAAATTATTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTGGTGTGGTAGAGCAATTCAGACCTTGGTGGACTTAAATTATTT  735

seq1  ACTGTGTTCACTTTATGTATGTGTGTGTATTGCTGGTGATCAATCAAATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTTCACTTTATGTATGTGTGTGTATTGCTGGTGATCAATCAAATC  785

seq1  CAGGCCCTTATGTGTGCGTGTCGCCACGAAATACTTAAACTGCTACACCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCTTATGTGTGCGTGTCGCCACGAAATACTTAAACTGCTACACCA  835

seq1  CGGAGGCAGGTCGTTTTAGGTCAGGAGTGAGAGGTTTGTTCGTTTTTGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGCAGGTCGTTTTAGGTCAGGAGTGAGAGGTTTGTTCGTTTTTGAT  885

seq1  AGCTATTTTTACTAGTTCACTGTCACGAAGATAGTTTGTAAACTAATAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTTTTACTAGTTCACTGTCACGAAGATAGTTTGTAAACTAATAAT  935

seq1  TTTTCTTTACACTTGTTATAGTCCCACACAGCAGGCATTTTTTGGACACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTACACTTGTTATAGTCCCACACAGCAGGCATTTTTTGGACACA  985

seq1  AGATTGCCAATGGATGCATTCAAATGAGTCCACTGAAGTTATGAAATTGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCCAATGGATGCATTCAAATGAGTCCACTGAAGTTATGAAATTGT  1035

seq1  ATATGTATGCACCTAAGTGTTTATGCATTTATCTTAGATTTTGTCTTATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATGCACCTAAGTGTTTATGCATTTATCTTAGATTTTGTCTTATT  1085

seq1  GTAAACTGTAATCTTTTTGTAATTAAGAATTC  1131
      ||||||||||||||||||||||||||||||||
seq2  GTAAACTGTAATCTTTTTGTAATTAAGAATTC  1117

seq1: chr13_13624936_13625941
seq2: B6Ng01-031F15.g_66_1057

seq1  GAATTCACTCTGAGCCAGTACATGCAAGCCCTCAGCACAGGCCAAAGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGAGCCAGTACATGCAAGCCCTCAGCACAGGCCAAAGGGT  50

seq1  GTGGTGTATTCTTGGACATCCTCATCTATTAGCACCATCTTAACAGGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTATTCTTGGACATCCTCATCTATTAGCACCATCTTAACAGGATT  100

seq1  ATCAAACTAGCTTAGTTCTGGAACATCGATACCTGTTTGGGACCTACGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACTAGCTTAGTTCTGGAACATCGATACCTGTTTGGGACCTACGTC  150

seq1  TGATCTGACTGATGCCTCTAGCTTTTGCTTTCCAGATATAGCAAGCGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGACTGATGCCTCTAGCTTTTGCTTTCCAGATATAGCAAGCGCAC  200

seq1  CAATGGACTAGGCTGAGATGTGCTGACACAAACTTTAGGCCAGAGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGACTAGGCTGAGATGTGCTGACACAAACTTTAGGCCAGAGTTTTT  250

seq1  GTCAATGTGATGCAGACCCAGACATATCTGTGAAGAATCTCAACTGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGTGATGCAGACCCAGACATATCTGTGAAGAATCTCAACTGAAGA  300

seq1  ACTTCTCCCATCAGGTTGGCCTATGGGTAAGCCAGTAGGGCATTTTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCCCATCAGGTTGGCCTATGGGTAAGCCAGTAGGGCATTTTGTTA  350

seq1  ATTGCTAATTGGTACCGGAGGGCCTATCCTACCAGGGATAGGCTGTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAATTGGTACCGGAGGGCCTATCCTACCAGGGATAGGCTGTGCCA  400

seq1  TCTCTGGACAGCTGGGCCTGGGCTCTACAGGAAAGTAGCTGAGGAGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGACAGCTGGGCCTGGGCTCTACAGGAAAGTAGCTGAGGAGCTGT  450

seq1  GGGGAGGAAGGCAGTAAGCAGTGTTCCTTCATGGCCTCTGCTTCACTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGAAGGCAGTAAGCAGTGTTCCTTCATGGCCTCTGCTTCACTTCC  500

seq1  TGCCTCCAGGACCCCGTCTTGAGCTCCTGTCCTGGGGTCTCATGATGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCAGGACCCCGTCTTGAGCTCCTGTCCTGGGGTCTCATGATGATG  550

seq1  GGCAGTAACCTGTAAGGTGAAATAAGCACTTTCCAGCCCAGGTTGCTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTAACCTGTAAGGTGAAATAAGCACTTTCCAGCCCAGGTTGCTTTG  600

seq1  GGTAATGTTTATCCCAGCAACAGAAACCTAACTAGGACGTTCCACCTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGTTTATCCCAGCAACAGAAACCTAACTAGGACGTTCCACCTAGG  650

seq1  CGTATCTCTGTGAGCACAGGAAACCAAACCCTTCCCCACTCCTCTCCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATCTCTGTGAGCACAGGAAACCAAACCCTTCCCCACTCCTCTCCTGA  700

seq1  TGGGAAGAAGCTCTTGAATTTCTTGTGACTATTTTCCAGTGTGCTGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGAAGCTCTTGAATTTCTTGTGACTATTTTCCAGTGTGCTGCATT  750

seq1  CAGGATCACTTCCTTGTTCTAGAAACTGGGCATGGGAGTGTGTAGACATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCACTTCCTTGTTCTAGAAACTGGGCATGGGAGTGTGTAGACATG  800

seq1  ATTCTGTCAAAACACCTAGAAGAGGGGCATGGGCTTGCATGAACATGCAT  850
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATTCTGTCAAAACACCTAGAAGA-GGGCATGGGCTTGCATGAACATGCAT  849

seq1  GCGTATATCTTTGCAATGCACACAAGGCATACACACATGTGTCCATGTGA  900
      |||||||||||||| |||||||| ||||||||||||||||||||||||||
seq2  GCGTATATCTTTGC-ATGCACAC-AGGCATACACACATGTGTCCATGTGA  897

seq1  GCACGCGTGATCCCATCCTTGGTGGCTGCAGAGTTCCTTTCTGTGACTTT  950
      |||||||||||||||||||  |||||||||||||  | ||||||||| ||
seq2  GCACGCGTGATCCCATCCT--GTGGCTGCAGAGT--CCTTCTGTGAC-TT  942

seq1  CACTTCATGACTCCTTACTCAGTCCTTAGCTGTGCCCAGCTTGTTCACTT  1000
      |||||||||||||  |||||||||  ||||||||  ||||||||||||||
seq2  CACTTCATGACTC--TACTCAGTC--TAGCTGTG--CAGCTTGTTCACTT  986

seq1  TGGCAG  1006
      ||||||
seq2  TGGCAG  992