BAC Information

Click to search

BAC

Clone NameB6Ng01-032B15
Chromosome13 (Build37)
Map Location 21,006,840 - 21,007,537
singlet/doubletsinglet
Overlap geneAoah
Upstream geneLOC432730, Elmo1, LOC100040226, LOC665381, LOC665386
Downstream geneOlfr1370, Olfr1369-ps1, Olfr42, Olfr1368, Trim27, Gpx5, LOC625752, Gpx6, Olfr1367, Zfp96, LOC665454, Zkscan3, Pgbd1, 4930470G03Rik, Zfp187, 4921504I05Rik, OTTMUSG00000000421, AK157302, LOC100040340, Zfp192, Olfr1366, Olfr1365, Olfr1364, Olfr1362, Olfr1363-ps1, Olfr11, Olfr1361, Olfr1360, Olfr1359, Hist1h2bl, Hist1h2ai, Hist1h3h, Hist1h2aj, Hist1h2bm, Hist1h4j, Hist1h4k, Hist1h2ak, Hist1h2bn, LOC100041150, Hist1h1b, Hist1h3i, Hist1h2an, Hist1h2bp, LOC665596, Rp23-480b19.10, LOC100041230, Hist1h4m, Hist1h2ao, LOC665622, LOC665634
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032B15.bB6Ng01-032B15.g
ACCDH861534DH861535
length1,158698
definitionDH861534|Mus musculus domesticus DNA, BAC clone: B6Ng01-032B15, 5' end.DH861535|Mus musculus domesticus DNA, BAC clone: B6Ng01-032B15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactacctgaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
cttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactacttagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaca
cagaagtggatgctcacagtcagctaaatggatggatcacagggctccaa
tggagagctagagaaagtacccaagagctaaagggatctgcaaccctata
agtggacaacatatgaactaatcagtacccggagctcttgactctagctg
catttgtatcaaaagatgctagtcagcatcactgaaagagagtccatgac
acgtaaacttaatgccaataagggaacgccagggcaaaagggtgtgggtg
ttgggatg
gaattccatatgagaagaaattctgtgaaggtataaactacaagacagtg
ccatactacaacagatcttctttcctagttgagtcaaatgaaagaggaaa
aaaatacatacatatccttatgtagcagtgtttgaggttagcagttaaag
aacctaatttatattagtttttagaatcagtaggaaaaagacagtactag
aagagaaggcagatctagaagatgcagatgtaatttgtttaattggctct
ttcacttggggactggaaaccttaatgacaacattagagaagactgcagg
gtggatggcagagtaatcaaaatctgggacttttccaaatgatgacacag
gaagtaatatttaatcatttgcatgtccttttcaacatacgtcaaggtta
atcaccctatgatggggagacagtctctgaagatgaacatctgaatgacc
taagagagaagccaggctctagccggcagagagttccagaaataactaaa
gcaaaagcttcctgctccaaaagccaaaatgcctgggcatctgagccacc
aatctgaaaaccaacaaaaaaaaaaaactagggcatccccacccgatgcc
cgttttatgctagtcaatactccccctcccccacccacccacccccaaag
atgcttttttggtcaagcactctttcaacatgatttacctggatatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_21006840_21007537
seq2: B6Ng01-032B15.g_69_766

seq1  GAATTCCATATGAGAAGAAATTCTGTGAAGGTATAAACTACAAGACAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATGAGAAGAAATTCTGTGAAGGTATAAACTACAAGACAGTG  50

seq1  CCATACTACAACAGATCTTCTTTCCTAGTTGAGTCAAATGAAAGAGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTACAACAGATCTTCTTTCCTAGTTGAGTCAAATGAAAGAGGAAA  100

seq1  AAAATACATACATATCCTTATGTAGCAGTGTTTGAGGTTAGCAGTTAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACATACATATCCTTATGTAGCAGTGTTTGAGGTTAGCAGTTAAAG  150

seq1  AACCTAATTTATATTAGTTTTTAGAATCAGTAGGAAAAAGACAGTACTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAATTTATATTAGTTTTTAGAATCAGTAGGAAAAAGACAGTACTAG  200

seq1  AAGAGAAGGCAGATCTAGAAGATGCAGATGTAATTTGTTTAATTGGCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGGCAGATCTAGAAGATGCAGATGTAATTTGTTTAATTGGCTCT  250

seq1  TTCACTTGGGGACTGGAAACCTTAATGACAACATTAGAGAAGACTGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTGGGGACTGGAAACCTTAATGACAACATTAGAGAAGACTGCAGG  300

seq1  GTGGATGGCAGAGTAATCAAAATCTGGGACTTTTCCAAATGATGACACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGGCAGAGTAATCAAAATCTGGGACTTTTCCAAATGATGACACAG  350

seq1  GAAGTAATATTTAATCATTTGCATGTCCTTTTCAACATACGTCAAGGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAATATTTAATCATTTGCATGTCCTTTTCAACATACGTCAAGGTTA  400

seq1  ATCACCCTATGATGGGGAGACAGTCTCTGAAGATGAACATCTGAATGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCCTATGATGGGGAGACAGTCTCTGAAGATGAACATCTGAATGACC  450

seq1  TAAGAGAGAAGCCAGGCTCTAGCCGGCAGAGAGTTCCAGAAATAACTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGAGAAGCCAGGCTCTAGCCGGCAGAGAGTTCCAGAAATAACTAAA  500

seq1  GCAAAAGCTTCCTGCTCCAAAAGCCAAAATGCCTGGGCATCTGAGCCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGCTTCCTGCTCCAAAAGCCAAAATGCCTGGGCATCTGAGCCACC  550

seq1  AATCTGAAAACCAACAAAAAAAAAAAACTAGGGCATCCCCACCCGATGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAAAACCAACAAAAAAAAAAAACTAGGGCATCCCCACCCGATGCC  600

seq1  CGTTTTATGCTAGTCAATACTCCCCCTCCCCCACCCACCCACCCCCAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTATGCTAGTCAATACTCCCCCTCCCCCACCCACCCACCCCCAAAG  650

seq1  ATGCTTTTTTGGTCAAGCACTCATTCAACAGGTATTACCTGGATATAC  698
      |||||||||||||||||||||| ||||||| |  ||||||||||||||
seq2  ATGCTTTTTTGGTCAAGCACTCTTTCAACATGATTTACCTGGATATAC  698