BAC Information

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BAC

Clone NameB6Ng01-032G22
Chromosome13 (Build37)
Map Location 118,530,963 - 118,750,784
singlet/doubletdoublet
Overlap geneHcn1, LOC100041695
Upstream geneParp8, LOC668288, LOC623312, Emb, EG623365, LOC382807
Downstream geneLOC674926, Mrps30, LOC668309, LOC100041278, Fgf10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032G22.bB6Ng01-032G22.g
ACCDH861771DH861772
length5081,021
definitionDH861771|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G22, 5' end.DH861772|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,750,271 - 118,750,784)(118,530,963 - 118,531,990)
sequence
tttgttgattattgctttgtttagtcattatttgcttgtactcatggttt
ctgcttttgtgtcttcattgtctatatgcacttgtgtgtgtgcatgaatg
cttgcttgtgtatatgcttttttctgtttgttagtcattcattttattct
tgtttttcatttgtctatttgttttcttatgaaagagatgaaaaagggtg
tggatttagaatggttgggaggatctggagtgagaggggaaaccataata
aaaatatcttgcatggaaaaagtatattcaataaaaaggagtagacaatt
ataaaagaaatatgtaagcattaaattgataagcaaatgcacttcgtaga
atattttatcttagttaactggaattagaaggaaggggaggttatgagaa
atatgttaggctagccatcctacaattaagtcttatcactggatttatga
gcattttataattaattaagaaatgctttttagagttttgaaagtttgtt
tgtaaaaa
gaattcattgcatatgaaataaagctagactttaatcacactatcatcca
cagagaagcttcaaatggcatatacacgaggcagctccctgggtgatttg
aaatgtaggggctgtaagaaagtgctgattttttttcagaacctctgtga
gctcgttgtgcttttgtttatttgtttaactaatattgcttgactttggt
ttagagtgagcaaatagagatttttttttaaaaaatcagatatcatttat
ttgatgtatattatttacaaaaccaaaagcaatgtagacagttacactga
cttcctagagcctactctgatccagacatatatagaattctgtcctcaga
aaagtgactctttgcttaatgctcagattctcagccagtgaaatgtcccc
taaactcattaggactcatttgtctttgtcagtaacaagctttcaagagc
tgggtcaacttggatggtttgtctctctgccactttgaatgaggccagtt
tacaggaaaaagaggaatttataatttgggatatatctaggggaattaca
taaatttaaatttttttacaaagttccaattacaaagaaaagtacatatt
aataaacattgtttaaaacaattggataaatccccatacatttacccttt
ccataaaagaacttgactttgggtattgcatgtgagttcgaatgaattta
aaaagattctgaccactttggctcaaggacagcaatttctgctggataat
cttctaatactcagtttagaagtgtcttagaaccatatgttgtgataaaa
atataacgtatatgccacgctgataatttaattcaagggtagagtttgtc
tcatttcaagaatagatgacgctagagtgcatatacttaaagccatactc
cataaatatcatttcttccatcaagttttttttttcctttcagaaactga
atgtaaatgattgctagtagaaccttggggctatgctttgcagcagaaag
catcatagaaggatttaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_118750271_118750784
seq2: B6Ng01-032G22.b_47_560 (reverse)

seq1  TTTTTACAAACAAACTTTCAAAACTCTAAAAAGCATTTCTTAATTAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACAAACAAACTTTCAAAACTCTAAAAAGCATTTCTTAATTAATTA  50

seq1  TAAAATGCACATAAATCCAGTGATAAGACTTAATTGTAGGATGGCTAGCC  100
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGCTCATAAATCCAGTGATAAGACTTAATTGTAGGATGGCTAGCC  100

seq1  TAACATTTTTCTCATAACCTCCCCTTCCTTCTAATTCCAGTTAACTAAGA  150
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATATTTCTCATAACCTCCCCTTCCTTCTAATTCCAGTTAACTAAGA  150

seq1  TAAAATATTCTACGAAGTGCATTTGCTTATCAATTTAATGCTTACATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTCTACGAAGTGCATTTGCTTATCAATTTAATGCTTACATATT  200

seq1  TCTTTTATAATTGTCTACTCCTTTTTATTGAATATACTTTTTCCATGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATAATTGTCTACTCCTTTTTATTGAATATACTTTTTCCATGCAA  250

seq1  GATATTTTTATTATGGTTTCCCCTCTCACTCCAGATCCTCCCAACCATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTTATTATGGTTTCCCCTCTCACTCCAGATCCTCCCAACCATTC  300

seq1  TAAATCCACACCCTTTTTCATCTCTTTCATAAGAAAACAAATAGACAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCACACCCTTTTTCATCTCTTTCATAAGAAAACAAATAGACAAAT  350

seq1  GAAAAACAAGAATAAAATGAATGACTAACAAACAGAAAAAAGCATATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACAAGAATAAAATGAATGACTAACAAACAGAAAAAAGCATATACA  400

seq1  CAAGCAAGCATTCATGCACACACACAAGTGCATATAGACAATGAAGACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAGCATTCATGCACACACACAAGTGCATATAGACAATGAAGACAC  450

seq1  AAAAGCAGAAACCATGAGTACAAGCAAATAATGACTAAACAAAGCAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGAAACCATGAGTACAAGCAAATAATGACTAAACAAAGCAATAA  500

seq1  TCAACAAAGAATTC  514
      ||||||||||||||
seq2  TCAACAAAGAATTC  514

seq1: chr13_118530963_118531990
seq2: B6Ng01-032G22.g_68_1088

seq1  GAATTCATTGCATATGAAATAAAGCTAGACTTTAATCACACTATCATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCATATGAAATAAAGCTAGACTTTAATCACACTATCATCCA  50

seq1  CAGAGAAGCTTCAAATGGCATATACACGAGGCAGCTCCCTGGGTGATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAGCTTCAAATGGCATATACACGAGGCAGCTCCCTGGGTGATTTG  100

seq1  AAATGTAGGGGCTGTAAGAAAGTGCTGATTTTTTTTCAGAACCTCTGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAGGGGCTGTAAGAAAGTGCTGATTTTTTTTCAGAACCTCTGTGA  150

seq1  GCTCGTTGTGCTTTTGTTTATTTGTTTAACTAATATTGCTTGACTTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTTGTGCTTTTGTTTATTTGTTTAACTAATATTGCTTGACTTTGGT  200

seq1  TTAGAGTGAGCAAATAGAGATTTTTTTTTAAAAAATCAGATATCATTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTGAGCAAATAGAGATTTTTTTTTAAAAAATCAGATATCATTTAT  250

seq1  TTGATGTATATTATTTACAAAACCAAAAGCAATGTAGACAGTTACACTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTATATTATTTACAAAACCAAAAGCAATGTAGACAGTTACACTGA  300

seq1  CTTCCTAGAGCCTACTCTGATCCAGACATATATAGAATTCTGTCCTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAGAGCCTACTCTGATCCAGACATATATAGAATTCTGTCCTCAGA  350

seq1  AAAGTGACTCTTTGCTTAATGCTCAGATTCTCAGCCAGTGAAATGTCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGACTCTTTGCTTAATGCTCAGATTCTCAGCCAGTGAAATGTCCCC  400

seq1  TAAACTCATTAGGACTCATTTGTCTTTGTCAGTAACAAGCTTTCAAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCATTAGGACTCATTTGTCTTTGTCAGTAACAAGCTTTCAAGAGC  450

seq1  TGGGTCAACTTGGATGGTTTGTCTCTCTGCCACTTTGAATGAGGCCAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCAACTTGGATGGTTTGTCTCTCTGCCACTTTGAATGAGGCCAGTT  500

seq1  TACAGGAAAAAGAGGAATTTATAATTTGGGATATATCTAGGGGAATTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAAAAAGAGGAATTTATAATTTGGGATATATCTAGGGGAATTACA  550

seq1  TAAATTTAAATTTTTTTACAAAGTTCCAATTACAAAGAAAAGTACATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTAAATTTTTTTACAAAGTTCCAATTACAAAGAAAAGTACATATT  600

seq1  AATAAACATTGTTTAAAACAATTGGATAAATCCCCATACATTTACCCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACATTGTTTAAAACAATTGGATAAATCCCCATACATTTACCCTTT  650

seq1  CCAT-AAAGAACTTGACTTTGGGTATTGCATGTGAGTTCGAATGAATTTA  699
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAAGAACTTGACTTTGGGTATTGCATGTGAGTTCGAATGAATTTA  700

seq1  AAAAGATTCTGACCACTTTGGCTCAAGGACAGCAATTTCTGCTGGATAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTCTGACCACTTTGGCTCAAGGACAGCAATTTCTGCTGGATAAT  750

seq1  CTTCTAATACTCAGTTTAGAAGTGTCTTAGAACCATATGTTGTGATAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAATACTCAGTTTAGAAGTGTCTTAGAACCATATGTTGTGATAAAA  800

seq1  ATATAACGTATATGCCACGCTGATTATTTAATTCAAGGGTAGAGTTTGTC  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATATAACGTATATGCCACGCTGATAATTTAATTCAAGGGTAGAGTTTGTC  850

seq1  TCATTCCAAGAATAGATGACGGCTAGAGTGCATATACTTAAAGCCATACT  899
      ||||| |||||||||||||| |||||||||||||||||||||||||||||
seq2  TCATTTCAAGAATAGATGAC-GCTAGAGTGCATATACTTAAAGCCATACT  899

seq1  CCATAAATATCATTTCCTTCCATCAAGGTTTTTTTTTTCCTTTCAGAAAA  949
      ||||||||||||||| |||||||||| ||||||||||||||||||| |||
seq2  CCATAAATATCATTT-CTTCCATCAA-GTTTTTTTTTTCCTTTCAG-AAA  946

seq1  CTGAATGTAAATGATTGCTAAGTTAGAACTATGTGGCTATGCTTTGCAGC  999
      ||||||||||||||||||||   ||||||  || ||||||||||||||||
seq2  CTGAATGTAAATGATTGCTA--GTAGAACCTTGGGGCTATGCTTTGCAGC  994

seq1  AGAAAGCATCAATAGAAGGATTTTAATGG  1028
      |||||||||| ||||||||| ||||||||
seq2  AGAAAGCATC-ATAGAAGGA-TTTAATGG  1021