BAC Information

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BAC

Clone NameB6Ng01-033P24
Chromosome13 (Build37)
Map Location 91,901,413 - 92,034,057
singlet/doubletdoublet
Overlap geneAcot12, Zcchc9, Ckmt2, Rasgrf2
Upstream geneEG435376, Rps23, Atg10, LOC100042959, Ssbp2, LOC666889
Downstream geneRasgrf2, Msh3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033P24.bB6Ng01-033P24.g
ACCDH862886DH862887
length5441,088
definitionDH862886|Mus musculus domesticus DNA, BAC clone: B6Ng01-033P24, 5' end.DH862887|Mus musculus domesticus DNA, BAC clone: B6Ng01-033P24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,033,507 - 92,034,057)(91,901,413 - 91,902,507)
sequence
tgttctaatgaatctttttggtcacaaaagatctttggaagaaagatata
taaatgtggacacagttccacagctggaaataactggtagatgtttcagg
catatgtgtatagatttggggggggctttttttcccccgagatagggttt
ttctgtgtagccctggctgtcctggaactcactctgtagaccaggctagc
ctcgaactcagaaatcctcctgtctctgcctcccaagtgctgggattaaa
ggtgtgcaccaccactgcctggctatgtgtgtagatcttgacaggtgcat
ttaggaaacttaacccagagggaatagcctttttgactattgagttagca
tttacttcatttctcttattttggctacattttctaacttcagagaagcc
cgtaattgagacaatgttccaaacactggagtctgaaaaaaatctttttc
attttagtattaagtggtggactgctagacttgtacaaattatttggaga
tggccagtgacattgttggggcgggggcggattgggggggataa
gaattcatcccaggataaaactggcaatgattaacaagatttggttcagc
agttaagtaggccaagtaataagaaggactcataatactgaatggaagga
aacgagacagtggaaaaaggatagcccagccaccttcaaagggtttcatc
tgccaggcagcacttgctctcaagttccttttcaggcacacacaatgtac
tttgcggacaaggacacatcatgatggatgcaagggtcttcatttcaggg
gagcctaggtataatttcccaggccgcctaatatattctgctgaccatgc
aaccaaactgtgacaatgcagagctactgtcattgtacacattcctgaca
actgagataggcaactcaggcagagtcatggtcaaccttcacatgccaac
aactgagataggcaacgctgggaaccttgaactttaaacagcacattaag
agtcactagatttttcacccttatctgggtgaagggtgaagttcagactg
aaggtatcttggagctgccaagatctttccacatagagtcagcatgtggg
catctctggtggagctggatcctggactctgttgcatccagggtttctgt
agggcagctgaagtgttaagataacatattgattctttgtttccctatta
gagactgttttgatgatatatccatattgggactatctcttggtacaaga
tagttttctctagaatgcctttattacctccccctgatgtcttaattttg
caaaagacaggaaaaattataataaaaattcagtggcgttataatctcac
acctcatttattgatctcatattttatagaattttgtactctgtaattcc
actgaaaaaattataaaatgagaaaataaacaagtgcagctttcaatgag
aaagaacaaagcccatgttggccttctaattgaaacatttgaagaaagat
tttcgccagaatgtttcatgaaatccacataaacagtccatttacttgag
taaaaaaaaacaatatggtgttggcatcctgcttttgcaaatcaatgggg
caccattatttaggaggcattgatgacgaacctgaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_92033507_92034057
seq2: B6Ng01-033P24.b_46_595 (reverse)

seq1  TTATCCCCCCCACTCCGCCCCCGCCCCAACAATTGTCACTGGCCATCTCC  50
      |||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  TTATCCCCCCCAATCCGCCCCCGCCCCAACAA-TGTCACTGGCCATCTCC  49

seq1  AAATAATTTGTACAAGTCTAGCAGTCCACCACTTAATACTAAAATGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTTGTACAAGTCTAGCAGTCCACCACTTAATACTAAAATGAAAA  99

seq1  AGATTTTTTTCAGACTCCAGTGTTTGGAACATTGTCTCAATTACGGGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTTCAGACTCCAGTGTTTGGAACATTGTCTCAATTACGGGCTT  149

seq1  CTCTGAAGTTAGAAAATGTAGCCAAAATAAGAGAAATGAAGTAAATGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAGTTAGAAAATGTAGCCAAAATAAGAGAAATGAAGTAAATGCTA  199

seq1  ACTCAATAGTCAAAAAGGCTATTCCCTCTGGGTTAAGTTTCCTAAATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATAGTCAAAAAGGCTATTCCCTCTGGGTTAAGTTTCCTAAATGCA  249

seq1  CCTGTCAAGATCTACACACATAGCCAGGCAGTGGTGGTGCACACCTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAAGATCTACACACATAGCCAGGCAGTGGTGGTGCACACCTTTAA  299

seq1  TCCCAGCACTTGGGAGGCAGAGACAGGAGGATTTCTGAGTTCGAGGCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCACTTGGGAGGCAGAGACAGGAGGATTTCTGAGTTCGAGGCTAG  349

seq1  CCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAAAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAAAAACC  399

seq1  CTATCTCGGGGGAAAAAAAGCCCCCCCCAAATCTATACACATATGCCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCGGGGGAAAAAAAGCCCCCCCCAAATCTATACACATATGCCTGA  449

seq1  AACATCTACCAGTTATTTCCAGCTGTGGAACTGTGTCCACATTTATATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTACCAGTTATTTCCAGCTGTGGAACTGTGTCCACATTTATATAT  499

seq1  CTTTCTTCCAAAGATCTTTTGTGACCAAAAAGATTCATTAGAACAGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCCAAAGATCTTTTGTGACCAAAAAGATTCATTAGAACAGAATT  549

seq1  C  551
      |
seq2  C  550

seq1: chr13_91901413_91902507
seq2: B6Ng01-033P24.g_67_1154

seq1  GAATTCATCCCAGGATAAAACTGGCAATGATTAACAAGATTTGGTTCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCCAGGATAAAACTGGCAATGATTAACAAGATTTGGTTCAGC  50

seq1  AGTTAAGTAGGCCAAGTAATAAGAAGGACTCATAATACTGAATGGAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGTAGGCCAAGTAATAAGAAGGACTCATAATACTGAATGGAAGGA  100

seq1  AACGAGACAGTGGAAAAAGGATAGCCCAGCCACCTTCAAAGGGTTTCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAGACAGTGGAAAAAGGATAGCCCAGCCACCTTCAAAGGGTTTCATC  150

seq1  TGCCAGGCAGCACTTGCTCTCAAGTTCCTTTTCAGGCACACACAATGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGCAGCACTTGCTCTCAAGTTCCTTTTCAGGCACACACAATGTAC  200

seq1  TTTGCGGACAAGGACACATCATGATGGATGCAAGGGTCTTCATTTCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCGGACAAGGACACATCATGATGGATGCAAGGGTCTTCATTTCAGGG  250

seq1  GAGCCTAGGTATAATTTCCCAGGCCGCCTAATATATTCTGCTGACCATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTAGGTATAATTTCCCAGGCCGCCTAATATATTCTGCTGACCATGC  300

seq1  AACCAAACTGTGACAATGCAGAGCTACTGTCATTGTACACATTCCTGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACTGTGACAATGCAGAGCTACTGTCATTGTACACATTCCTGACA  350

seq1  ACTGAGATAGGCAACTCAGGCAGAGTCATGGTCAACCTTCACATGCCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGATAGGCAACTCAGGCAGAGTCATGGTCAACCTTCACATGCCAAC  400

seq1  AACTGAGATAGGCAACGCTGGGAACCTTGAACTTTAAACAGCACATTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGATAGGCAACGCTGGGAACCTTGAACTTTAAACAGCACATTAAG  450

seq1  AGTCACTAGATTTTTCACCCTTATCTGGGTGAAGGGTGAAGTTCAGACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTAGATTTTTCACCCTTATCTGGGTGAAGGGTGAAGTTCAGACTG  500

seq1  AAGGTATCTTGGAGCTGCCAAGATCTTTCCACATAGAGTCAGCATGTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATCTTGGAGCTGCCAAGATCTTTCCACATAGAGTCAGCATGTGGG  550

seq1  CATCTCTGGTGGAGCTGGATCCTGGACTCTGTTGCATCCAGGGTTTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGGTGGAGCTGGATCCTGGACTCTGTTGCATCCAGGGTTTCTGT  600

seq1  AGGGCAGCTGAAGTGTTAAGATAACATATTGATTCTTTGTTTCCCTATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGCTGAAGTGTTAAGATAACATATTGATTCTTTGTTTCCCTATTA  650

seq1  GAGACTGTTTTGATGATATATCCATATTGGGACTATCTCTTGGTACAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGTTTTGATGATATATCCATATTGGGACTATCTCTTGGTACAAGA  700

seq1  TAGTTTTCTCTAGAATGCCTTTATTACCTCCCCCTGATGTCTTAATTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTCTCTAGAATGCCTTTATTACCTCCCCCTGATGTCTTAATTTTG  750

seq1  CAAAAGACAGGAAAAATTATAATAAAAATTCAGTGGCGTTATAATCTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGACAGGAAAAATTATAATAAAAATTCAGTGGCGTTATAATCTCAC  800

seq1  ACCTCATTTATTGATCTCATATTTTATAGAATTTTGTACTCTGTAATTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATTTATTGATCTCATATTTTATAGAATTTTGTACTCTGTAATTCC  850

seq1  ACTGAAAAAATTATAAAATGAGAAAAATAAACAAGTGCAGCTTTCAAATG  900
      |||||||||||||||||||||| |||||||||||||||||||||| ||||
seq2  ACTGAAAAAATTATAAAATGAG-AAAATAAACAAGTGCAGCTTTC-AATG  898

seq1  AGAAAGAACAAAGCCCATGTTGGCCTTCTAATTGAAACATTTGAAGAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAACAAAGCCCATGTTGGCCTTCTAATTGAAACATTTGAAGAAAG  948

seq1  ATTTTCGCCAGAATGTTTCATGAAATCACCAATAAACAGTCCATTTACTT  1000
      ||||||||||||||||||||||||||| |  |||||||||||||||||||
seq2  ATTTTCGCCAGAATGTTTCATGAAATC-CACATAAACAGTCCATTTACTT  997

seq1  GAGTAAAAAAAAACCATATGGTG-TGGCAT-CTGCTTTTGCAAAATTCAC  1048
      |||||||||||||| |||||||| |||||| |||||||||||||  ||| 
seq2  GAGTAAAAAAAAACAATATGGTGTTGGCATCCTGCTTTTGCAAA--TCA-  1044

seq1  ATTGGGCACCCATAATTTAAGGAGGCAGTGAATGACGAAACTGAAGA  1095
      || ||||| |||| |||| |||||||| || |||||||| |||||||
seq2  ATGGGGCA-CCATTATTT-AGGAGGCATTG-ATGACGAACCTGAAGA  1088