BAC Information

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BAC

Clone NameB6Ng01-034E10
Chromosome13 (Build37)
Map Location 50,083,919 - 50,084,933
singlet/doubletsinglet
Overlap genenone
Upstream geneWnk2, Ninj1, 1110007C09Rik, Susd3, Fgd3, Bicd2, Ippk, Cenpp, Tes3-ps, Ecm2, Aspn, Omd, Ogn, Nol8, Iars, LOC667488, LOC670357, EG638833, Gm272, EG667503, EG667507, LOC100040099
Downstream geneLOC625110, LOC676907, LOC667546, LOC667552, LOC100040085, LOC100040159, LOC100040176, LOC100040118, Gm906, 2310081J21Rik, LOC676954, LOC667625, LOC667632, EG667637, Fbxw17, Gm806, EG639044, Gm904, LOC100040315, EG667693, LOC100040161, LOC100040190, EG667712, LOC676997, EG667717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034E10.bB6Ng01-034E10.g
ACCDH863076DH863077
length9851,018
definitionDH863076|Mus musculus domesticus DNA, BAC clone: B6Ng01-034E10, 5' end.DH863077|Mus musculus domesticus DNA, BAC clone: B6Ng01-034E10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctccacaggaaagcagaagcctaccttttacagtagcagttt
ccttcctggtcttgctctgcccactcttcatcacctgtcacttgcaaata
atacaaatgagcttgggcccgtctttactatctctgacagacaaacttct
tgcaatctgtgtttatgagtaacaggaaattcacatttcccagggatctc
tctaattcatctttgactcctacacactgtgtataagcacatttactttt
ggctctgtttgaaaaacagcaaaagggaccgtctgtgcctcaggtaccac
agatgtcctcagtcagtggttctcagatacgatccactcaaggctgagct
ctgcatctgactctgggctgtcagttcataactactttctcagaacagag
acgactcaatccctgatctgaggctcatggtctcatcatctgctacacag
cagctcatagcaaacaaaagcaactgcttgaggacaggaatgagtgatgg
cttgtcacatggtatgtcctgtgtccttacccactcagaaatacagtctg
tccatggaaccttggtcgtcgtcgtggtctctatatcatgttctacagat
gttctgagagctgcaggcaggcacctcatgggcactctcacctctgtttt
acctgcccgtccctgcagactgatttgcttctctctcaaaagttcccctc
acttgtctgtagctctgctctgaatgcttttctctcttccacccttctcc
accccattttcttccacattttcaatttcataacactaaattgagggaaa
agttagagagggaaagggaaacattattgttagactacttcctatgatag
gggtgagtcttggggcaagttgatgtttgcatcagatatcatttgtcttc
ttctgtccatgactgctacaagcacaaacactatcactaatagcaataca
gcaaccaaaaccacctgtctttcaagcttatcgtt
gaattccagttttatgtttgataccgaattccttgcagaatgaaataaaa
ttcttactagaataggatggcccgttatctgtcttaatacgtttaggcaa
tcccatggcattaaaggcttgcaggcaatgatcaattacgtttttagaag
cctctcctgtatgaagagaagcaaaaagaaatcttgaacaggtatcgata
caaacatgtatatattttagttttccaaattctgcataatgggttatatc
catttgccaaatatgattaggcataaggcctctaggattgactcctaaat
gtggcactggagataatgtaatacatttaggacattgttttacaatcatt
cttgcttgctccttattgatcttatgtcagaaccttagggtatggctaga
gagatgaaacctttcatgatcatgttgggccaaagcaacaggatctgaaa
ttaaggtttctcctattagacctctgtcaatgtgatcattgcctttagct
agaggcccagaaagaccagagtgagactgtatgtggccaattaaaaatgg
atttttccgggcgagaatgatgttttgcaattctgaaaataaagatcctg
acagcatattgaagttaaacataccacaggtctccaataagggtactgat
tgtgcaacatataaactgtcagtaaagatattaaaagcctcatgtacaga
ctgaaagaccattagtactgctgttaactcggctaactgagccgaaaggc
caggagtctctatgataacttgttgattattattaagatatctagcttgc
cctttagaggagcattcagtaaaaatcagtagagcattatataaaggctg
taaggagtcattttaagaaatatcacatcatgtacatttggaaatttatc
aacctatcttggggtagttgcttgtctatatttttgtaaaagctgaacaa
tgatactgctctttgccgaaataatttatgccggcttctttatggatctc
atcgtggcccggcttgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_50083919_50084933
seq2: B6Ng01-034E10.b_47_1031

seq1  GAATTCTTCTCCACAGGAAAGCAGAAGCCTACCTTTTACAGTAGCAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTCCACAGGAAAGCAGAAGCCTACCTTTTACAGTAGCAGTTT  50

seq1  CCTTCCTGGTCTTGCTCTGCCCACTCTTCATCACCTGTCACTTGCAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTGGTCTTGCTCTGCCCACTCTTCATCACCTGTCACTTGCAAATA  100

seq1  ATACAAATGAGCTTGGGCCCGTCTTTACTATCTCTGACAGACAAACTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATGAGCTTGGGCCCGTCTTTACTATCTCTGACAGACAAACTTCT  150

seq1  TGCAATCTGTGTTTATGAGTAACAGGAAATTCACATTTCCCAGGGATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCTGTGTTTATGAGTAACAGGAAATTCACATTTCCCAGGGATCTC  200

seq1  TCTAATTCATCTTTGACTCCTACACACTGTGTATAAGCACATTTACTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTCATCTTTGACTCCTACACACTGTGTATAAGCACATTTACTTTT  250

seq1  GGCTCTGTTTGAAAAACAGCAAAAGGGACCGTCTGTGCCTCAGGTACCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGTTTGAAAAACAGCAAAAGGGACCGTCTGTGCCTCAGGTACCAC  300

seq1  AGATGTCCTCAGTCAGTGGTTCTCAGATACGATCCACTCAAGGCTGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCCTCAGTCAGTGGTTCTCAGATACGATCCACTCAAGGCTGAGCT  350

seq1  CTGCATCTGACTCTGGGCTGTCAGTTCATAACTACTTTCTCAGAACAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCTGACTCTGGGCTGTCAGTTCATAACTACTTTCTCAGAACAGAG  400

seq1  ACGACTCAATCCCTGATCTGAGGCTCATGGTCTCATCATCTGCTACACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACTCAATCCCTGATCTGAGGCTCATGGTCTCATCATCTGCTACACAG  450

seq1  CAGCTCATAGCAAACAAAAGCAACTGCTTGAGGACAGGAATGAGTGATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCATAGCAAACAAAAGCAACTGCTTGAGGACAGGAATGAGTGATGG  500

seq1  CTTGTCACATGGTATGTCCTGTGTCCTTACCCACTCAGAAATACAGTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCACATGGTATGTCCTGTGTCCTTACCCACTCAGAAATACAGTCTG  550

seq1  TCCATGGAACCTTGGTCGTCGTCGTGGTCTCTATATCATGTTCTACAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGAACCTTGGTCGTCGTCGTGGTCTCTATATCATGTTCTACAGAT  600

seq1  GTTCTGAGAGCTGCAGGCAGGCACCTCATGGGCACTCTCACCTCTGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAGAGCTGCAGGCAGGCACCTCATGGGCACTCTCACCTCTGTTTT  650

seq1  ACCTGCCCGTCCCTGCAGACTGATTTGCTTCTCTCTCAAAAGTTCCCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCCGTCCCTGCAGACTGATTTGCTTCTCTCTCAAAAGTTCCCCTC  700

seq1  ACTTGTCTGTAGCTCTGCTCTGAATGCTTTTCTCTCCTCCACCCTTCTCC  750
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACTTGTCTGTAGCTCTGCTCTGAATGCTTTTCTCTCTTCCACCCTTCTCC  750

seq1  ACCCCATTTTCTTCCACATTTTCAATTTCATAACACTAAATTGGAGGGAA  800
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACCCCATTTTCTTCCACATTTTCAATTTCATAACACTAAATT-GAGGGAA  799

seq1  AAGGTTAGAGAGGGAAAGGGAAACATTATTGTTAGACTACTTCCTAATGA  850
      || |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AA-GTTAGAGAGGGAAAGGGAAACATTATTGTTAGACTACTTCCT-ATGA  847

seq1  TTAGGGGGTTGAGTTCCTTTGGGGCAAGTTTGATGTTTGCCATCAGGATA  900
       ||||||  |||||    |||||||||| |||||||||| ||||| ||||
seq2  -TAGGGG--TGAGT---CTTGGGGCAAG-TTGATGTTTG-CATCA-GATA  888

seq1  TCCATTTTGTTCTTCCTTCTGTTCACATGACTGCTTAACAAACCACAAAC  950
      | |||||   |||| |||||||   ||||||||||  || || |||||||
seq2  T-CATTT--GTCTT-CTTCTGT--CCATGACTGCT--AC-AAGCACAAAC  929

seq1  ACTATCAACTAATAGCAAATAACAAGCAACCAACAACCCACCTTGCCTTC  1000
      |||||| ||||||||| ||||   ||||||||  || ||||| || ||| 
seq2  ACTATC-ACTAATAGC-AATA--CAGCAACCA--AAACCACC-TGTCTTT  972

seq1  CAAGGCCTTATCGTT  1015
      ||||  |||||||||
seq2  CAAG--CTTATCGTT  985