BAC Information

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BAC

Clone NameB6Ng01-036E04
Chromosome13 (Build37)
Map Location 67,926,749 - 68,114,250
singlet/doubletdoublet
Overlap geneZfp273, BC048507, LOC666185, LOC100042687, LOC100042692
Upstream geneEG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597
Downstream geneLOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2, LOC666205
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036E04.bB6Ng01-036E04.g
ACCDH864496DH864497
length762763
definitionDH864496|Mus musculus domesticus DNA, BAC clone: B6Ng01-036E04, 5' end.DH864497|Mus musculus domesticus DNA, BAC clone: B6Ng01-036E04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,113,489 - 68,114,250)(67,926,749 - 67,927,507)
sequence
gaattcccatgtgcatttcagccctttcaacaccagctcaggtaaggaac
gactcaagtttgtaaaaacggagagacaaagaaagcacagtacacacagg
atgggatatttttctgcctcagaaatacaataggcattggaatttgaaac
aacggacatgagcatgctttctctaagataaatgatataatcacagaatg
aacaaccttaggtcatgctttctcagtggaagaatgaagagttgttatcc
aatatgtataaagcttcaattatgtcagataaataaatagtagaaatcta
ctgggaacatgatatcgaccctaacaatttaatcctggacacatctgaat
ttgttgaagatgtaagtcctatgcttggctcttaatacaaaagtaaacta
agaaatatttttttccttttccattttttattaggtatttagctcattta
catttccaatgctataccaaaagtccgccatacccacctacccccactcc
cctacccacccactccccctttttggccctggcgttcccctgtactggga
ctctctttccagtgatggccgactaggcaatcttttgatacatatgcagc
tagagtcaagagcttccggggtactggttagttcataatgttgttccacc
tatagggttgcatatcccttaagcttcttgggtactttctcttactcctc
cattgggaccctgtgatccatccattagctgactgtaagcatccacttct
gagtttgttagg
gaattcatactggagagaaaccatataaatgtaatgagtgtgggaaagcc
tttagcatttgctcaacgtttttgaaacaccagcgaatacacagtggaga
aaaaccctataaatgcaaagaatgtgagaaggcctttaataattgttata
atctaattcaacaccaaagaattcatactggagagaaaccctacaaatgt
aaagactgtggcaaagcctttaattatacttcaagccttgctcaacatga
aagaattcacactggagagaaaccctacaaatgtgaagaatgtggcaagg
cctttaactcttcctcaaatcttaaacaccattggagactccatactggt
gagaagccttacaaatgtgaacaatgtgggaaagccttttaaaaactgct
caggctttactcgacactatagaattcatactagagaaaactcagattag
tacaaaccatgttgcaaagccttccataatcatttactgataattcgaca
ctaaagaattcatatgagaggggaactttagaaattaaaaggaacaaggg
aagaccttttaataaatagctcaactcttatcaccctcttccattaaacg
gaggagaaatcttgtaatgtgaagaagatgggctgtattgtaacaatcta
ttacttatgaaacatcaaaatttcatttaccagaaaccctgcaaatgcaa
gttatgggggaatgccctctcaccacgagtgaattataatcaactgtata
cctgcattatgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68113489_68114250
seq2: B6Ng01-036E04.b_43_804 (reverse)

seq1  CCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTAATGGATGGATCAC  50
      |||| ||||| |||||||||||||| ||||||||||||||||||||||||
seq2  CCTAACAAACTCAGAAGTGGATGCTTACAGTCAGCTAATGGATGGATCAC  50

seq1  AGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGAT  100
      |||| ||||||||||||||  |||||||||||||||| |||| |||||||
seq2  AGGG-TCCCAATGGAGGAGTAAGAGAAAGTACCCAAGAAGCTTAAGGGAT  99

seq1  CTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCGG-A  149
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCGGAA  149

seq1  GCTCTTGACTCTAGCTGCATATGTATCAAAAGATTGCCTAGTCGGCCATC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGACTCTAGCTGCATATGTATCAAAAGATTGCCTAGTCGGCCATC  199

seq1  ACTGGAAAGAGAGTCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAAGAGAGTCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGA  249

seq1  GTGGGTGGGTAGGGGAGTGGGGGTAGGTGGGTATGGCGGACTTTTGGTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGGTAGGGGAGTGGGGGTAGGTGGGTATGGCGGACTTTTGGTAT  299

seq1  AGCATTGGAAATGTAAATGAGCTAAATACCTAATAAAAAATGGAAAAGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGGAAATGTAAATGAGCTAAATACCTAATAAAAAATGGAAAAGGA  349

seq1  AAAAAATATTTCTTAGTTTACTTTTGTATTAAGAGCCAAGCATAGGACTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATATTTCTTAGTTTACTTTTGTATTAAGAGCCAAGCATAGGACTT  399

seq1  ACATCTTCAACAAATTCAGATGTGTCCAGGATTAAATTGTTAGGGTCGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCAACAAATTCAGATGTGTCCAGGATTAAATTGTTAGGGTCGAT  449

seq1  ATCATGTTCCCAGTAGATTTCTACTATTTATTTATCTGACATAATTGAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTTCCCAGTAGATTTCTACTATTTATTTATCTGACATAATTGAAG  499

seq1  CTTTATACATATTGGATAACAACTCTTCATTCTTCCACTGAGAAAGCATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATACATATTGGATAACAACTCTTCATTCTTCCACTGAGAAAGCATG  549

seq1  ACCTAAGGTTGTTCATTCTGTGATTATATCATTTATCTTAGAGAAAGCAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAGGTTGTTCATTCTGTGATTATATCATTTATCTTAGAGAAAGCAT  599

seq1  GCTCATGTCCGTTGTTTCAAATTCCAATGCCTATTGTATTTCTGAGGCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGTCCGTTGTTTCAAATTCCAATGCCTATTGTATTTCTGAGGCAG  649

seq1  AAAAATATCCCATCCTGTGTGTACTGTGCTTTCTTTGTCTCTCCGTTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATCCCATCCTGTGTGTACTGTGCTTTCTTTGTCTCTCCGTTTTT  699

seq1  ACAAACTTGAGTCGTTCCTTACCTGAGCTGGTGTTGAAAGGGCTGAAATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTTGAGTCGTTCCTTACCTGAGCTGGTGTTGAAAGGGCTGAAATG  749

seq1  CACATGGGAATTC  762
      |||||||||||||
seq2  CACATGGGAATTC  762

seq1: chr13_67926749_67927507
seq2: B6Ng01-036E04.g_67_829

seq1  GAATTCATACTGGAGAGAAACCATATAAATGTAATGAGTGTGGGAAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACTGGAGAGAAACCATATAAATGTAATGAGTGTGGGAAAGCC  50

seq1  TTTAGCATTTGCTCAACGTTTTTGAAACACCAGCGAATACACAGTGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCATTTGCTCAACGTTTTTGAAACACCAGCGAATACACAGTGGAGA  100

seq1  AAAACCCTATAAATGCAAAGAATGTGAGAAGGCCTTTAATAATTGTTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCTATAAATGCAAAGAATGTGAGAAGGCCTTTAATAATTGTTATA  150

seq1  ATCTAATTCAACACCAAAGAATTCATACTGGAGAGAAACCCTACAAATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATTCAACACCAAAGAATTCATACTGGAGAGAAACCCTACAAATGT  200

seq1  AAAGACTGTGGCAAAGCCTTTAATTATACTTCAAGCCTTGCTCAACATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTGTGGCAAAGCCTTTAATTATACTTCAAGCCTTGCTCAACATGA  250

seq1  AAGAATTCACACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTCACACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAGG  300

seq1  CCTTTAACTCTTCCTCAAATCTTAAACACCATTGGAGACTCCATACTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAACTCTTCCTCAAATCTTAAACACCATTGGAGACTCCATACTGGT  350

seq1  GAGAAGCCTTACAAATGTGAACAATGTGGGAAAGCC-TTTAAAAACTGCT  399
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAGAAGCCTTACAAATGTGAACAATGTGGGAAAGCCTTTTAAAAACTGCT  400

seq1  CAGGCTTTACTCGACACTATAGAATTCATACTAGAGAAAACTCAGATTAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTTACTCGACACTATAGAATTCATACTAGAGAAAACTCAGATTAG  450

seq1  TAC-AACCATGTTGCAAAGCCTTCCATAATCATTTACTGATAATTCGACA  498
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACCATGTTGCAAAGCCTTCCATAATCATTTACTGATAATTCGACA  500

seq1  CTAAAGAATTCATATGAGAGGGGAACTTTAGAAA-TGAAAGGAACAAGGG  547
      |||||||||||||||||||||||||||||||||| | |||||||||||||
seq2  CTAAAGAATTCATATGAGAGGGGAACTTTAGAAATTAAAAGGAACAAGGG  550

seq1  AAGACC-TTTAAT-AATAGCTCAACTCTTATTCACCCTCTTCCATTAAAC  595
      |||||| |||||| |||||||||||||||| |||||||||||||||||||
seq2  AAGACCTTTTAATAAATAGCTCAACTCTTA-TCACCCTCTTCCATTAAAC  599

seq1  GGAGGAGAAATCTTGTAATGTGAAGAAGAT-GGCTGTAATG-AACAATCT  643
      |||||||||||||||||||||||||||||| ||||||| || ||||||||
seq2  GGAGGAGAAATCTTGTAATGTGAAGAAGATGGGCTGTATTGTAACAATCT  649

seq1  A-TACTTATGAAACATCAAAATTTTCATTTTACAGAAACCCTGCAAATGC  692
      | ||||||||||||||||||| ||||||||  ||||||||||||||||||
seq2  ATTACTTATGAAACATCAAAA-TTTCATTTACCAGAAACCCTGCAAATGC  698

seq1  AAGTAATGGGGGAAATGCACACTCACCACGAGTGAATTATAATCAAACTG  742
      |||| ||||||| ||||| | ||||||||||||||||||||||| |||||
seq2  AAGTTATGGGGG-AATGCCCTCTCACCACGAGTGAATTATAATC-AACTG  746

seq1  TATACATGCATAATGAC  759
      ||||| ||||| |||||
seq2  TATACCTGCATTATGAC  763