BAC Information

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BAC

Clone NameB6Ng01-036H23
Chromosome13 (Build37)
Map Location 67,592,589 - 67,691,373
singlet/doubletdoublet
Overlap geneZfp817, Zfp87, Zfp748
Upstream geneC330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik
Downstream geneA530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272, LOC100042223
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036H23.bB6Ng01-036H23.g
ACCDH864654DH864655
length1,1341,085
definitionDH864654|Mus musculus domesticus DNA, BAC clone: B6Ng01-036H23, 5' end.DH864655|Mus musculus domesticus DNA, BAC clone: B6Ng01-036H23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,690,212 - 67,691,373)(67,592,589 - 67,593,675)
sequence
gaattcatctgttagagaaaccacacaagtgtgaagaatgttccaaggtc
ttttgtacttactaagaactgtaaaacacctcagttcatacaagactgaa
atgcctcatgtgaaaaatgttgcaaaccctttaatagactttcttgtatg
tctcaacacaaggtactccaagctggagtgaaatagtacaaatgttaaaa
atattcacagtacattaacacttcttcagacactaagttatcgaaagctt
tctgctgaatggaaactatgtaagattgagaaatgtggtaaataaagcct
ttggaatcattcacacaaccatgtcaaaaatacaaatgtcagactgttta
ttctctggatttgaggctgatctttccttgctgtcttttgtttcttctgt
ttgagaatcagaacacttctataccattgttgcaaaagtagtcacttgtt
tttatgttgtaatagatcacacataagagattgccttgagtctcacataa
cacatggactgtggtctcataatgttgtaattattaaatactatatggac
ctttcaagttgtaggctattttacttaggaggtgaaagtaaggttgggga
aaagggaagaaatgttgtgattaaagctctgtggctaaggctagcatgag
tttgggaacaaacttaaaagacaagacccatacccatgttagtattccaa
gtacccacaaaataggtaattacctctgcagatttttctctgacctccat
gtgtgggctcccacatatacatacatacatacacccagacaaataaacct
aaattatgttttggaattatgcttgtgttttatgcagacaggggtcaaga
attaatgcttatatcttaattctcagctactacttgagtatcatatctgt
ctcattccacatgttccctaagcatgctttctaaaatatgatatgtacaa
aactgtaacagctccataatgctttgtttatagagttatctggtttgtgt
ttctcatagactagaacagtagtaagatacatggtagataatgacttgac
ttcgatgcaattagcctttactggctcttgtgtggatatttatcacgcat
gagaaacttactaatctcttggcaaatgcaagtt
gaattctttgatgtaccttaagcaatgaagggtaggaaaattctttggcg
cattcttcacacttgtatggttttttcccagtatggtttttctggtgtct
ataatatgttgagcgagtactgaaggccttgccacattcttcacatttgt
acggtttttctccagtatggattctcttgtgttcagaaaggtttgaatga
ctattaaaagccttaccacattcttcacatttgtagggtttttctcccgt
atgaactctctggtgtgtagaaagttttgagcgaatacgaaaggccttac
cacattcttcacatttgtagggtttttctccagtatgtattctcttgtgt
tcagaaaggtttgaacgattattaaaggccttaccacattcttcacactt
gaaggctttctcccctgtacgaattctctggtgctgagtaagcagtgact
tgcaaaaaaaggccttgctgaaatctttacatttgttgacggtttttcct
gttgaccaaaagttgatttatgaacaaaagcttagcacattctttatatt
tttaatgtttccctttaaatgggagacatatactcctacttacattctta
ttgataaatcagaaagaacacaacatttcctacccctgtattcatttagc
attgattcagaaaaatatagtaggaggaaacaatctaagcttctactgaa
ataaaagcttggtcaaattgattatagaaaataaggcccaccagggtagt
agtgggtgcatgccttaaatcctggcactctggaggcaaagagaagtggg
tatctgtgattcccaggccagccctggtgtacagaatgagttcaagacag
tcaaggtttcaaagagaaacccttatctcaacaaacaataaacaaacaaa
agaaaggcacactatccaagtttagtagccaaataagtagtcattatcta
tgacaaagatatctaaggtattatgtatccttaagtacacatagatatta
tacatggacacccttgcatatcaacttggaaacagaagatcatgtggtga
ctgatgtgacatgaagcatacaagaaacacatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67690212_67691373
seq2: B6Ng01-036H23.b_47_1180 (reverse)

seq1  AACTTGCATTTGGCAAGAAGATTTAGTAAGTTTTCTCATGGCCGTGATAA  50
      |||||||||||| |||| ||| |||||||| |||||||||  |||||| |
seq2  AACTTGCATTTGCCAAG-AGA-TTAGTAAG-TTTCTCATG--CGTGAT-A  44

seq1  AATATCCACACAAGAGCAAGTTAAAGGGTTTAATTTGCATCGTAGTTCAA  100
      ||||||||||||||||| || |||||| |   | |||||||| || ||||
seq2  AATATCCACACAAGAGCCAG-TAAAGGCT---AATTGCATCGAAG-TCAA  89

seq1  GGTCATTATCTACCATGGTATCTTACTTACTGTTCTAGTCTTATGAAGAG  150
       ||||||||||||||| ||||||||| ||||||||||||| |||| ||| 
seq2  -GTCATTATCTACCAT-GTATCTTAC-TACTGTTCTAGTC-TATG-AGAA  134

seq1  ACACCAAACCAGGATAACTCTTATAAACAAAGCATTTATTGGAGCTTGTT  200
      ||| ||||||| |||||||| |||||||||||||||   |||||||   |
seq2  ACA-CAAACCA-GATAACTC-TATAAACAAAGCATT--ATGGAGCT--GT  177

seq1  TACAGTTTTGTACATTATCATTATTTTAGAAAGCATGCTTAGGGAACATG  250
      |||||||||||||| ||||| |||||||||||||||||||||||||||| 
seq2  TACAGTTTTGTACA-TATCA-TATTTTAGAAAGCATGCTTAGGGAACAT-  224

seq1  GTGGAATGGAGACAGATATGATACTCAAGTAGTAGCTGAGAATTAAGATA  300
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAT-GAGACAGATATGATACTCAAGTAGTAGCTGAGAATTAAGATA  273

seq1  TAAGCATTAATTCTTGACCCCTGTCTGCATAAAACACAAGCATAATTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATTAATTCTTGACCCCTGTCTGCATAAAACACAAGCATAATTCCA  323

seq1  AAACATAATTTAGGTTTATTTTGTCTGGGTGTATGTATGTATGTATATGT  400
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAACATAATTTAGGTTTA-TTTGTCTGGGTGTATGTATGTATGTATATGT  372

seq1  GGGAGCCCACACATGGAGGTCAGAGAAAAATCTGCAGAGGTAATTACCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCCACACATGGAGGTCAGAGAAAAATCTGCAGAGGTAATTACCTA  422

seq1  TTTTGTGGGTACTTGGAATACTAACATGGGTATGGGTCTTGTCTTTTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGGGTACTTGGAATACTAACATGGGTATGGGTCTTGTCTTTTAAG  472

seq1  TTTGTTCCCAAACTCATGCTAGCCTTAGCCACAGAGCTTTAATCACAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCCCAAACTCATGCTAGCCTTAGCCACAGAGCTTTAATCACAACA  522

seq1  TTTCTTCCCTTTTCCCCAACCTTACTTTCACCTCCTAAGTAAAATAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCCTTTTCCCCAACCTTACTTTCACCTCCTAAGTAAAATAGCCT  572

seq1  ACAACTTGAAAGGTCCATATAGTATTTAATAATTACAACATTATGAGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTGAAAGGTCCATATAGTATTTAATAATTACAACATTATGAGACC  622

seq1  ACAGTCCATGTGTTATGTGAGACTCAAGGCAATCTCTTATGTGTGATCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCATGTGTTATGTGAGACTCAAGGCAATCTCTTATGTGTGATCTA  672

seq1  TTACAACATAAAAACAAGTGACTACTTTTGCAACAATGGTATAGAAGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACATAAAAACAAGTGACTACTTTTGCAACAATGGTATAGAAGTGT  722

seq1  TCTGATTCTCAAACAGAAGAAACAAAAGACAGCAAGGAAAGATCAGCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTCTCAAACAGAAGAAACAAAAGACAGCAAGGAAAGATCAGCCTC  772

seq1  AAATCCAGAGAATAAACAGTCTGACATTTGTATTTTTGACATGGTTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAGAGAATAAACAGTCTGACATTTGTATTTTTGACATGGTTGTGT  822

seq1  GAATGATTCCAAAGGCTTTATTTACCACATTTCTCAATCTTACATAGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATTCCAAAGGCTTTATTTACCACATTTCTCAATCTTACATAGTTT  872

seq1  CCATTCAGCAGAAAGCTTTCGATAACTTAGTGTCTGAAGAAGTGTTAATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCAGCAGAAAGCTTTCGATAACTTAGTGTCTGAAGAAGTGTTAATG  922

seq1  TACTGTGAATATTTTTAACATTTGTACTATTTCACTCCAGCTTGGAGTAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGAATATTTTTAACATTTGTACTATTTCACTCCAGCTTGGAGTAC  972

seq1  CTTGTGTTGAGACATACAAGAAAGTCTATTAAAGGGTTTGCAACATTTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTTGAGACATACAAGAAAGTCTATTAAAGGGTTTGCAACATTTTT  1022

seq1  CACATGAGGCATTTCAGTCTTGTATGAACTGAGGTGTTTTACAGTTCTTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAGGCATTTCAGTCTTGTATGAACTGAGGTGTTTTACAGTTCTTA  1072

seq1  GTAAGTACAAAAGACCTTGGAACATTCTTCACACTTGTGTGGTTTCTCTA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTACAAAAGACCTTGGAACATTCTTCACACTTGTGTGGTTTCTCTA  1122

seq1  ACAGATGAATTC  1162
      ||||||||||||
seq2  ACAGATGAATTC  1134

seq1: chr13_67592589_67593675
seq2: B6Ng01-036H23.g_65_1149

seq1  GAATTCTTTGATGTACCTTAAGCAATGAAGGGTAGGAAAATTCTTTGGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATGTACCTTAAGCAATGAAGGGTAGGAAAATTCTTTGGCG  50

seq1  CATTCTTCACACTTGTATGGTTTTTTCCCAGTATGGTTTTTCTGGTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCACACTTGTATGGTTTTTTCCCAGTATGGTTTTTCTGGTGTCT  100

seq1  ATAATATGTTGAGCGAGTACTGAAGGCCTTGCCACATTCTTCACATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATGTTGAGCGAGTACTGAAGGCCTTGCCACATTCTTCACATTTGT  150

seq1  ACGGTTTTTCTCCAGTATGGATTCTCTTGTGTTCAGAAAGGTTTGAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTTTTTCTCCAGTATGGATTCTCTTGTGTTCAGAAAGGTTTGAATGA  200

seq1  CTATTAAAAGCCTTACCACATTCTTCACATTTGTAGGGTTTTTCTCCCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAAAGCCTTACCACATTCTTCACATTTGTAGGGTTTTTCTCCCGT  250

seq1  ATGAACTCTCTGGTGTGTAGAAAGTTTTGAGCGAATACGAAAGGCCTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTCTCTGGTGTGTAGAAAGTTTTGAGCGAATACGAAAGGCCTTAC  300

seq1  CACATTCTTCACATTTGTAGGGTTTTTCTCCAGTATGTATTCTCTTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCTTCACATTTGTAGGGTTTTTCTCCAGTATGTATTCTCTTGTGT  350

seq1  TCAGAAAGGTTTGAACGATTATTAAAGGCCTTACCACATTCTTCACACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGGTTTGAACGATTATTAAAGGCCTTACCACATTCTTCACACTT  400

seq1  GAAGGCTTTCTCCCCTGTACGAATTCTCTGGTGCTGAGTAAGCAGTGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTTTCTCCCCTGTACGAATTCTCTGGTGCTGAGTAAGCAGTGACT  450

seq1  TGCAAAAAAAGGCCTTGCTGAAATCTTTACATTTGTTGACGGTTTTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAAAAGGCCTTGCTGAAATCTTTACATTTGTTGACGGTTTTTCCT  500

seq1  GTTGACCAAAAGTTGATTTATGAACAAAAGCTTAGCACATTCTTTATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACCAAAAGTTGATTTATGAACAAAAGCTTAGCACATTCTTTATATT  550

seq1  TTTAATGTTTCCCTTTAAAT-GGAGACATATACTCCTACTTACATTCTTA  599
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTAATGTTTCCCTTTAAATGGGAGACATATACTCCTACTTACATTCTTA  600

seq1  TTGATAAATCAGAAAGAACACAACA-TTCCTACCCCTGTATTCATTTAGC  648
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTGATAAATCAGAAAGAACACAACATTTCCTACCCCTGTATTCATTTAGC  650

seq1  A-TGATTCAG-AAAATATAGTAGGAGGAAACAATCTAAGCTTCTACTGAA  696
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTCAGAAAAATATAGTAGGAGGAAACAATCTAAGCTTCTACTGAA  700

seq1  ATAAAAGCTTGGTCAAATTGATTATAG-AAATAAGGCCCACCA-GGTAGT  744
      ||||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  ATAAAAGCTTGGTCAAATTGATTATAGAAAATAAGGCCCACCAGGGTAGT  750

seq1  AGT-GGTGCATGCCTTTAATCCTGGCACTCTGGAGGCAGAGAGAAGTGGG  793
      ||| |||||||||||| ||||||||||||||||||||| |||||||||||
seq2  AGTGGGTGCATGCCTTAAATCCTGGCACTCTGGAGGCAAAGAGAAGTGGG  800

seq1  TATCTGTGAGTTCCAGGCCAG-CCTGGTGTACAGATTGAGTTCCAAGACA  842
      ||||||||| | ||||||||| ||||||||||||| |||||| |||||||
seq2  TATCTGTGATTCCCAGGCCAGCCCTGGTGTACAGAATGAGTT-CAAGACA  849

seq1  GTCAAGGTTACAAAGAGAAACCC-TATCTCAAACAAACAAATAAACAAAC  891
      ||||||||| ||||||||||||| |||||| ||||||| |||||||||||
seq2  GTCAAGGTTTCAAAGAGAAACCCTTATCTC-AACAAAC-AATAAACAAAC  897

seq1  AAAAAGAAAGGCACACTATTCCAAGTTAAGTAGCCAAATAAGTAGTCATT  941
       ||||||||||||||||| |||||||| ||||||||||||||||||||||
seq2  -AAAAGAAAGGCACACTA-TCCAAGTTTAGTAGCCAAATAAGTAGTCATT  945

seq1  ATCTATGACAAAAGAATATCCTAAGGGTATTATGTATCCTT-AGTACACA  990
      ||||||||||||   |||| |||| |||||||||||||||| ||||||||
seq2  ATCTATGACAAA--GATAT-CTAA-GGTATTATGTATCCTTAAGTACACA  991

seq1  TAGATATTATACATGGACACACCTGGCATTATCAACTTGGAAAACAGAAG  1040
      |||||||||||||||||||| ||| ||| ||||||||||| |||||||||
seq2  TAGATATTATACATGGACAC-CCTTGCA-TATCAACTTGG-AAACAGAAG  1038

seq1  ATCA-GTGGTGACTGAGTGAGAC-TGAAGCAATAC-AGAAACACCATTTT  1087
      |||| ||||||||||| || ||| |||||| |||| ||||||| ||||||
seq2  ATCATGTGGTGACTGA-TGTGACATGAAGC-ATACAAGAAACA-CATTTT  1085