BAC Information

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BAC

Clone NameB6Ng01-040A14
Chromosome13 (Build37)
Map Location 28,577,862 - 28,578,178
singlet/doubletsinglet
Overlap genenone
Upstream genePrl8a8, Prl8a9, Prl8a1, Prl7b1, Prl7a1, Prl7a2, RP23-135A24.2-001, Prl7d1, Prl7c1, Prl2a1, OTTMUSG00000000651, LOC666321, LOC195243, LOC100041036, Prl4a1, Prl5a1, LOC100042388, LOC100042393, LOC100042399
Downstream genePpia-ps13_297.1, LOC626683, 2610307P16Rik, Sox4, LOC100041135, Cdkal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040A14.bB6Ng01-040A14.g
ACCDH867127DH867128
length1,006317
definitionDH867127|Mus musculus domesticus DNA, BAC clone: B6Ng01-040A14, 5' end.DH867128|Mus musculus domesticus DNA, BAC clone: B6Ng01-040A14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgatagaatttttggaatcacttatatatactatcatatcta
ctgcaactagtgatatcttggcttcctccttctcaatttgtatccctttg
atctccttttgttttctaattgctctggcaagaacttggagtaataatta
aataggtaggatgagactgggcagccttgtcttagtcctgattttaatga
gattgcttttagtttctctccatttaatttgatgttgactattggtttgc
tgtatattgtttttattatatttaggttgaaccttgaattcctaatcctt
ccaatactcttagcatgaaggggtgttgtattttatcaaaggattcttta
gcatctaatgaaatgatcacatggtttttcctttgagtttgtttatatag
tcaattacattgatggatttccatatattgaactgtccctgcattcctag
gatgatgcctacttgaccatggtgaatcatggtaatatgtttttgaattt
ggtttgtgagaattttgttgagtatttttgcattgatattcataagcaat
tggtctgaagttctcttttttagttgggtctttgtgtggtttaggtatca
gtgtaactgtggcttcatagaaagaattgggtagggttccttctgtttct
attttatagaatagtttgagaagtattgatattaggatttctttgaagat
ctggtagaattctgcactaaacccatctggcccttggcttttttggtttg
gagacttttaatgactgcttctatttccttgggggttatgggactgttta
gatggtttatctgatcctgatttaactttggtacctggtatctgtctaga
aaaccattgatttcatatagactttccattttggttgaatatagatgttg
tggtaagctctggtttgtttttttttttttattcttcaattctgctgtgt
gtggcccttttcatttccgttttgtttattggatacggtctctcttcact
caatat
tttgacagctcaaccttcaggtcatattgtggctttttcttgaaagtatt
tttctatacctttgtatactaagtgattttggatgtttttattgacccca
tgaatattcattgtatggatcagatagggagatttctattatactagtat
ggagaatggccacccccttttcttttttagcagtcaagacacttgcttta
ggttgctcagtctcagtttgtggctctctaaccgtgctatcctggatggg
ctctcctgcacatgtgtaaatttggggtttagaatgatatatatgtatgt
gtatatgtatatgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_28577862_28578178
seq2: B6Ng01-040A14.g_74_390 (reverse)

seq1  CACACATATACATATACACATACATATATATCATTCTAAACCCCAAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATATACATATACACATACATATATATCATTCTAAACCCCAAATTT  50

seq1  ACACATGTGCAGGAGAGCCCATCCAGGATAGCACGGTTAGAGAGCCACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGTGCAGGAGAGCCCATCCAGGATAGCACGGTTAGAGAGCCACAA  100

seq1  ACTGAGACTGAGCAACCTAAAGCAAGTGTCTTGACTGCTAAAAAAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGACTGAGCAACCTAAAGCAAGTGTCTTGACTGCTAAAAAAGAAAA  150

seq1  GGGGGTGGCCATTCTCCATACTAGTATAATAGAAATCTCCCTATCTGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGGCCATTCTCCATACTAGTATAATAGAAATCTCCCTATCTGATC  200

seq1  CATACAATGAATATTCATGGGGTCAATAAAAACATCCAAAATCACTTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAATGAATATTCATGGGGTCAATAAAAACATCCAAAATCACTTAGT  250

seq1  ATACAAAGGTATAGAAAAATACTTTCAAGAAAAAGCCACAATATGACCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAGGTATAGAAAAATACTTTCAAGAAAAAGCCACAATATGACCTG  300

seq1  AAGGTTGAGCTGTCAAA  317
      |||||||||||||||||
seq2  AAGGTTGAGCTGTCAAA  317