BAC Information

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BAC

Clone NameB6Ng01-041P07
Chromosome2 (Build37)13 (Build37)
Map Location 134,884,913 - 134,885,10288,324,279 - 88,325,254
singlet/doubletsingletsinglet
Overlap genePlcb1
Upstream geneHao1, Txndc13, LOC627897, LOC433478
Downstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4, 6330527O06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041P07.bB6Ng01-041P07.g
ACCDH868469DH868470
length244974
definitionDH868469|Mus musculus domesticus DNA, BAC clone: B6Ng01-041P07, 5' end.DH868470|Mus musculus domesticus DNA, BAC clone: B6Ng01-041P07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(134,884,913 - 134,885,102)(88,324,279 - 88,325,254)
sequence
accaaaatgctgaggcctgtttaagaatccagtctgttagtccatgtctt
ttggggacaggagaattgagttcattgatgttaagagatattaaagtaaa
gtgactgttttatatatgtatatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatatc
tatatatatatatatacatacacacacacacacatatatatata
gaattcatagtccaaggcatactacactttggaagttatgtagcccatga
ggtatcatgctcatttcaggaatgggctttacaaattgtcattcagagca
gtgccagctcagacatcaaagatggaagagtaggtgtcactgttaaagtt
tcaggaaacatcctgggcctggtgtagttcaaaatgtcctttagtgggca
ctcatgtgttgcttcaccactcccttcatgtcatacttgtaagctttcta
caggcagtatgtcagactcatgatgaacacattgtgggtaggaacacaga
agtctatgctggttagcttccccttcaactctgagatgatctttccgcag
ccttggaagcatctatggatacagagatgatattctgagaaggccttaca
gcttccaagaggggctttccacagtattctgggtatcagtaatgggagtg
actattatcatatgtccttccacaatgccaaagttatcatggatgagatt
ggccagggggcctagctattggtggttcaggaagcattgctgacagtctt
aagagagttgtcataattctcatagttcacaccaattacagatattggta
taatagcagaagagccagagataatgaccctttggctccattcttcaagg
gtgctctgactttttatgtggtggtgaagataccaatggactccacaaca
tatttggcaccagcatcacccaatttgatattcataatatctggctagtg
gaaaaatgtcatggctttcagcctgatgacaagtgataagctatctcctc
aaaaataatgagctaattcaagccaaattaaaatatataggcaagattac
cgggggcagttcttagatcatttcacaacctcaaaggagggggtcagtga
gatcctcatgcaaaaggagacaggagacataggggaggggatagagaaaa
taaaaaagtttgcttgcagaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134884913_134885102
seq2: B6Ng01-041P07.b_160_293 (reverse)

seq1  TATATATATATGTGTGTGTGTGTGTATGTATATATATATATATAAATATA  50
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TATATATATATGTGTGTGTGTGTGTATGTATATATATATATATAGATATA  50

seq1  TATGTGTGTATATATATATATGTGTGTGTGTGTATATATATATATATATG  100
      ||      ||||||||||||            ||||||||||||||||  
seq2  TA------TATATATATATA------------TATATATATATATATA--  80

seq1  TGTGTGTGTATATATATATATATGTGTGTGTGTGTGTGTATATATATATA  150
              ||||||||||||||                ||||||||||||
seq2  --------TATATATATATATA----------------TATATATATATA  106

seq1  TATATGTGTGTGTGTGTATATATATATATATATATATATA  190
      ||||            |||||||||||||||| |||||||
seq2  TATA------------TATATATATATATATACATATATA  134

seq1: chr13_88324279_88325254
seq2: B6Ng01-041P07.g_68_1041

seq1  GAATTCATAGTCCAAGGCATACTACACTTTGGAAGTTATGTAGCCCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGTCCAAGGCATACTACACTTTGGAAGTTATGTAGCCCATGA  50

seq1  GGTATCATGCTCATTTCAGGAATGGGCTTTACAAATTGTCATTCAGAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCATGCTCATTTCAGGAATGGGCTTTACAAATTGTCATTCAGAGCA  100

seq1  GTGCCAGCTCAGACATCAAAGATGGAAGAGTAGGTGTCACTGTTAAAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAGCTCAGACATCAAAGATGGAAGAGTAGGTGTCACTGTTAAAGTT  150

seq1  TCAGGAAACATCCTGGGCCTGGTGTAGTTCAAAATGTCCTTTAGTGGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAACATCCTGGGCCTGGTGTAGTTCAAAATGTCCTTTAGTGGGCA  200

seq1  CTCATGTGTTGCTTCACCACTCCCTTCATGTCATACTTGTAAGCTTTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTGTTGCTTCACCACTCCCTTCATGTCATACTTGTAAGCTTTCTA  250

seq1  CAGGCAGTATGTCAGACTCATGATGAACACATTGTGGGTAGGAACACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGTATGTCAGACTCATGATGAACACATTGTGGGTAGGAACACAGA  300

seq1  AGTCTATGCTGGTTAGCTTCCCCTTCAACTCTGAGATGATCTTTCCGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATGCTGGTTAGCTTCCCCTTCAACTCTGAGATGATCTTTCCGCAG  350

seq1  CCTTGGAAGCATCTATGGATACAGAGATGATATTCTGAGAAGGCCTTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGAAGCATCTATGGATACAGAGATGATATTCTGAGAAGGCCTTACA  400

seq1  GCTTCCAAGAGGGGCTTTCCACAGTATTCTGGGTATCAGTAATGGGAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCAAGAGGGGCTTTCCACAGTATTCTGGGTATCAGTAATGGGAGTG  450

seq1  ACTATTATCATATGTCCTTCCACAATGCCAAAGTTATCATGGATGAGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTATCATATGTCCTTCCACAATGCCAAAGTTATCATGGATGAGATT  500

seq1  GGCCAGGGGGCCTAGCTATTGGTGGTTCAGGAAGCATTGCTGACAGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGGGGCCTAGCTATTGGTGGTTCAGGAAGCATTGCTGACAGTCTT  550

seq1  AAGAGAGTTGTCATAATTCTCATAGTTCACACCAATTACAGATATTGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGTTGTCATAATTCTCATAGTTCACACCAATTACAGATATTGGTA  600

seq1  TAATAGCAGAAGAGCCAGAGATAATGACCCTTTGGCTCCATTCTTCAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCAGAAGAGCCAGAGATAATGACCCTTTGGCTCCATTCTTCAAGG  650

seq1  GTGCTCTGACTTTTTATGTGGTGGTGAAGATACCAATGGACTCCACAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTGACTTTTTATGTGGTGGTGAAGATACCAATGGACTCCACAACA  700

seq1  TATTTGGCACCAGCATCACCCAATTTGATATTCATAATATCTGGCTAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGCACCAGCATCACCCAATTTGATATTCATAATATCTGGCTAGTG  750

seq1  GAAAAATGTCATGGCTTTCAGCCTGATGACAAGTGATAAGCTATCTCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATGTCATGGCTTTCAGCCTGATGACAAGTGATAAGCTATCTCCTC  800

seq1  AAAAATAATGAGCTAATTCAAGCCAAATTAAAATATATAGGCAAGATTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATGAGCTAATTCAAGCCAAATTAAAATATATAGGCAAGATTAC  850

seq1  CGGGGGCAGTTCTTAGATCAGTTCACAACCTCAAAGGAGGGGGTCAGTGA  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CGGGGGCAGTTCTTAGATCATTTCACAACCTCAAAGGAGGGGGTCAGTGA  900

seq1  GATACTCATGCAGAAGGAGACAAGGAGACATAGGGGAGGGGAAAGAGAAA  950
      ||| |||||||| |||||||| |||||||||||||||||||| |||| ||
seq2  GATCCTCATGCAAAAGGAGAC-AGGAGACATAGGGGAGGGGATAGAG-AA  948

seq1  AAGAAAAAAGTTTGCATGCAGAGGGA  976
      || |||||||||||| ||||||||||
seq2  AATAAAAAAGTTTGCTTGCAGAGGGA  974