BAC Information

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BAC

Clone NameB6Ng01-041P09
Chromosome13 (Build37)
Map Location 29,823,444 - 29,824,096
singlet/doubletsinglet
Overlap geneCdkal1
Upstream geneLOC626683, 2610307P16Rik, Sox4, LOC100041135
Downstream geneE2f3, Mboat1, Agtr1a, Uqcrfs1, Dusp22, LOC666443
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041P09.bB6Ng01-041P09.g
ACCDH868473DH868474
length1,167654
definitionDH868473|Mus musculus domesticus DNA, BAC clone: B6Ng01-041P09, 5' end.DH868474|Mus musculus domesticus DNA, BAC clone: B6Ng01-041P09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccggtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaaaggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatctgcaggacctgagataaa
gaagatgggctcctcaggaaatgattctgcctatttggttgtatctttga
ataatagacctaagctccgccttaagatcaacggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatctctacacattggtggcc
caaagcgtggcccaccacagagtcatctcattcattacagggcctaggat
atcaatcatgtcccactataagctccgttgccttgacgtgggaatcctct
gaaggacagcaagggaaattcataccttatgtgctcccactcccggttaa
cctctggggaagggatattatgcagcatttgggcctttattttgtccaat
gaaaacgccccatcgggagggtattcaactaaagcaaaaaatatcatggc
aaagatggggttataaagaaagaaaaagggttaggacatccagaacaggg
aaaggatagagcctatcttacctaatggaaaccaataccgacaggtttgg
gttttttccttatgggcattgggggcacccgacccatacctggaaacagg
ggactccatgtgggttccttcatggtccctttcttctgaaaaataaaatc
tgtgttcaatgggaaaggaacatttaaataggcaaattgagccttctact
cccttggaatactccattttggaattaaaaaagtaggaattggaaactgc
tcttgatctctcagata
gaattcaagggcagtgaggcggaagtgggtgagtgggtaggtgaacaccc
tcttagaagcagtggaaggagggatggaacagggggtttctggaggggaa
gccaggaaagggaataacatttgaaatgtaaatatagaaaatatccaata
aaagaaaagaaaaaaataaagaataccaaataaagtcccccaacacagag
tctttggcctgcacaataaggacgtggggagaagcaactataccaagtac
tctttggctaacacagtatcagctactgagacgttagggaaaaggaagta
aaataatgtcaggagacacaaaatgggaattcacttctgggtcataaaaa
aggaaatatatgagttagtctagcttcttataccaaaatccaccaattaa
ttcatccaaaagttcgaaatgaaacagacgtacagggcaccgtgcttctt
cactatgtagcacaggctagtcttcctatctcagttacacctgtgcacca
ctatacctagcttccttagctatccttcctcggtgctacaatgtatactt
ttctcactctaggcattgagttaaggatcattgctttcttttgggaaagt
taagagccacatgattactacactgattaaattgttacagatatcaaaga
cagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_29823444_29824096
seq2: B6Ng01-041P09.g_69_722

seq1  GAATTCAAGGGCAGTGAGGCGGAAGTGGGTGAGTGGGTAGGTGAACACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGGCAGTGAGGCGGAAGTGGGTGAGTGGGTAGGTGAACACCC  50

seq1  TCATAGAAGCAGTGGAAGGAGGGATGGAACAGGGGGTTTCTGGAGGGGAA  100
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAAGCAGTGGAAGGAGGGATGGAACAGGGGGTTTCTGGAGGGGAA  100

seq1  GCCAGGAAAGGGAATAACATTTGAAATGTAAATATAGAAAATATCCAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAAAGGGAATAACATTTGAAATGTAAATATAGAAAATATCCAATA  150

seq1  AAAGAAAAGAAAAAAATAAAGAATACCAAATAAAGTCCCCCAACACAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAGAAAAAAATAAAGAATACCAAATAAAGTCCCCCAACACAGAG  200

seq1  TCTTTGGCCTGCACAATAAGGACGTGGGGAGAAGCAACTATACCAAGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGCCTGCACAATAAGGACGTGGGGAGAAGCAACTATACCAAGTAC  250

seq1  TCTTTGGCTAACACAGTATCAGCTACTGAGACGTTAGGGAAAAGGAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGCTAACACAGTATCAGCTACTGAGACGTTAGGGAAAAGGAAGTA  300

seq1  AAATAATGTCAGGAGACACAAAATGGGAATTCACTTCTGGGTCATAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGTCAGGAGACACAAAATGGGAATTCACTTCTGGGTCATAAAAA  350

seq1  AGGAAATATATGAGTTAGTCTAGCTTCTTATACCAAAATCCACCAATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATATATGAGTTAGTCTAGCTTCTTATACCAAAATCCACCAATTAA  400

seq1  TTCATCCAAAAGTTCGAAATGAAACAGACGTACAGGGCACCGTGCTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCAAAAGTTCGAAATGAAACAGACGTACAGGGCACCGTGCTTCTT  450

seq1  CACTATGTAGCACAGGCTAGTCTTCCTATCTCAGTTACACCTGTGCACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGTAGCACAGGCTAGTCTTCCTATCTCAGTTACACCTGTGCACCA  500

seq1  CTATACCTAGCTTCCTTAGCTATCCTTCCTCGGTGCTACAATGTATACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACCTAGCTTCCTTAGCTATCCTTCCTCGGTGCTACAATGTATACTT  550

seq1  TTCTCACTCTAGGCATTGAGTTAAGGATCAATGCTTTC-TTTGGGAAAGT  599
      |||||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  TTCTCACTCTAGGCATTGAGTTAAGGATCATTGCTTTCTTTTGGGAAAGT  600

seq1  TAAGAGCCACATGATTACTACACTGATTAAATTGTTACAGATATCAAAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGCCACATGATTACTACACTGATTAAATTGTTACAGATATCAAAGA  650

seq1  CAGC  653
      ||||
seq2  CAGC  654