MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-042C17
Chromosome	13 (Build37)
Map Location	16,752,032 - 16,753,206
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Gli3, LOC665157, Inhba, LOC625181, LOC665191
Downstream gene	5033411D12Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gli3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14634 MGI:95729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665157 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665157
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Inhba (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16323 MGI:96570
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625181 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625181
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins pseudo : _no_value

name	LOC665191 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665191
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	5033411D12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192136 MGI:1923221
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gli3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120953172 GeneID:14634 MGI:95729
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GLI-Kruppel family member GLI3 transcript_id : NM_008130.2

name	Inhba (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680450 GeneID:16323 MGI:96570
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inhibin beta-A transcript_id : NM_008380.1

name	5033411D12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328351 GeneID:192136 MGI:1923221
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5033411D12 gene transcript_id : NM_138654.2

name	Gli3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120953173 GeneID:14634 MGI:95729
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0017053 - transcriptional repressor complex [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IGI]; GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0048754 - branching morphogenesis of a tube [Evidence IMP]; GO:0007417 - central nervous system development [Evidence IMP] [Evidence IGI]; GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0048558 - embryonic gut morphogenesis [Evidence IMP]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP] [Evidence IGI]; GO:0030900 - forebrain development [Evidence IMP]; GO:0030324 - lung development [Evidence IGI]; GO:0001656 - metanephros development [Evidence IGI]; GO:0045596 - negative regulation of cell differentiation [Evidence IGI]; GO:0008285 - negative regulation of cell proliferation [Evidence IGI] [Evidence IMP]; GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0048663 - neuron fate commitment [Evidence IMP]; GO:0045595 - regulation of cell differentiation [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007224 - smoothened signaling pathway [Evidence IGI]; GO:0006350 - transcription [Evidence IEA]; GO:0001658 - ureteric bud branching [Evidence IGI] codon_start : 1 note : extra toes; brachyphalangy; polydactyly Nagoya; anterior digit pattern deformity product : GLI-Kruppel family member GLI3 protein_id : NP_032156.2

name	Inhba (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680451 CCDS:CCDS26251.1 GeneID:16323 MGI:96570
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005179 - hormone activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0040007 - growth [Evidence IEA] codon_start : 1 note : activin product : inhibin beta A protein_id : NP_032406.1

name	5033411D12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328352 CCDS:CCDS26252.1 GeneID:192136 MGI:1923221
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC192136 protein_id : NP_619595.2

name	LOC665157 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665157
definition	number : 2 pseudo : _no_value

name	LOC665157 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665157
definition	number : 1 pseudo : _no_value

name	LOC665191 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665191
definition	number : 1 pseudo : _no_value

name	LOC625181 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263906 GeneID:625181
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins product : similar to ubiquitin-conjugating enzyme E2L 3 pseudo : _no_value transcript_id : XR_031877.1

clone name	MSMg01-385M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403A05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-270J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371B07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-382O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265C07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-476K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014E21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-042C17.b	B6Ng01-042C17.g
ACC	DH868621	DH868622
length	1,162	1,173
definition	DH868621\|Mus musculus domesticus DNA, BAC clone: B6Ng01-042C17, 5' end.	DH868622\|Mus musculus domesticus DNA, BAC clone: B6Ng01-042C17, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcaattgtcctgaattctagctcaatagtcttctttttctgcatta catgagactgcattgaggcagaatgagtgcaacagggagcatagcagaca ctatcattattcccccatgctgtgttatccaaaagcaccccacaacctat tctacactatactaaacttaactgttcctcatcagatgtactgcacaatg ctctgtattacagtattcttcactgccataccatactactcgataccact tcattctagactgcatggtataactaccatactaccaaataaataacctg ataggaattttggtttctattctgtgcctaatcaccaggattccactaat ctcttccctgtaagtccagcttgagcttctaaacaggagttgtttctgtc cttgcccacagtccctatgattcctgcagtctcttggctatcttgagatt caatcaccttgcatgtaccatggagccaaatttttctaatttttaagatt gaggagaataataatccagcatcccggaccaaggtctgactctgagaccc tccattgttatctcccaatttgtaaggtgctttgctttgaagtcagaatt ccatggattgttctgctcttgactttgattgagttctggtctacaggaac aatcaatttcagtgccctttctaacacatcaaggagaccctcagctgggc cttataactgagaataccttaacgtttcttttatctatcactgtctttta ataatcaagactgtcattaataatcaggatttatgaagatcatcctcacc ccttactaacaatagtagctgctgcctcagcatcctccagcatggcagta tcactagggaatggttggaattctctaagtaattagcatatagctataaa gtagtcccataaagtcagatctgggtttatcattaccagctggtggcctg agatcaatttcttcatatatgaaatgcagatagaaataatactggattaa aaagagttgtttagcatacaggtgagtactgaaagtgttacgataattct aatttcaagccttccgtggaaaggtcataatccatttgttgatacttgac acagtcttccaggccaatcgagtcagcatcgactgaagcagttcttagca tttgtaatctgc	gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatgaaaaattaaggtgacagc agatgctggctaggatgtggaggaaggggaacactcctccattgttggtg ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagatgatgtcccaaccggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaaggtggaaagaacccagat gcccctcaacagaggaatggatacagaaaatatggtacatttacacaatg gaatgctactcagctattaaaaaatgaatttatgaaattcctaggcaaat ggatggacctggagggtatcatcctgaatgaggtaacccaatcacaaagg aacttgcacaatatgtactcactgataagtggatattagcccagaaactt aggatacccaagatataagatataactcgccaaacgcatgaaattcaaga agaacaaagaccaaagtgtggacactttacccttcttagaattgggaaca aaacacccatggaaggagttacagagacaaagtttggagctgtgacgaaa ggattgaccatctagagactgccatatgcagggatccatcccataatcag cttccaaatgctgacaccattgcatacactagcaagattttgctgaaagg acccagatatagctatctcttgtgagactatgccagggcctagcaaacac agaagtggatgatcacagtcagctattggatgggtcacacggccccaatg aaggagctagagaattacccaagagctaaaggaactgcaaccctatagtg gaacaacaatattgaactagcagtaccccggagctcttgtctctagctgc ataatgtatcaaaaagatggcttagtcgccatcactgcaagaagaggcca ttggacttgcaacttttatatgttcccagtacagggaacgccaggccaaa agggggagtgtggtgttaggggg
quality values	Open. Hide. 61 47 19 29 61 38 31 61 61 61 36 47 61 61 61 61 49 55 49 61 61 61 47 61 61 61 59 49 61 59 59 41 43 59 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 34 44 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 44 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 39 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 53 37 37 50 61 61 47 61 52 61 61 61 61 61 61 61 61 47 61 61 61 61 61 53 61 40 61 47 61 53 53 50 53 61 61 39 61 61 61 52 50 42 34 30 39 61 61 61 61 61 50 61 61 52 61 40 61 53 61 53 53 61 47 53 53 57 53 53 57 53 53 53 57 50 57 39 30 53 34 47 32 53 57 57 53 50 57 53 30 47 53 57 42 36 53 50 53 57 57 52 52 52 57 57 53 43 40 57 57 53 42 57 53 53 57 57 42 33 53 53 50 45 40 53 53 57 45 45 30 42 47 52 50 50 52 57 57 47 41 33 52 53 39 26 41 45 53 57 40 45 42 53 52 36 53 42 57 52 45 53 53 57 53 40 50 23 39 39 47 45 45 45 50 53 57 57 33 23 47 45 53 45 50 50 45 47 52 52 52 28 57 45 30 42 43 41 47 53 53 52 47 45 50 57 35 50 50 57 57 37 34 39 40 38 50 50 34 36 32 52 57 25 37 52 57 57 53 42 50 40 32 32 38 38 37 25 33 52 28 36 52 36 42 29 37 40 37 42 37 37 36 37 42 40 37 37 37 18 57 37 22 29 31 53 52 28 36 23 35 35 40 33 40 40 37 40 33 44 33 37 25 33 33 30 37 34 40 36 32 40 35 40 34 24 48 25 31 37 29 28 39 33 21 30 28 27 36 18 30 27 36 28 30 29 21 29 21 20 30 22 30 38 31 25 30 25 28 23 29 29 18 29 29 29 25 51 36 29 29 20 47 34 14 34 47 17 20 24 14 29 35 29 29 29 24 36 25 28 33 27 26 29 29 25 28 27 28 24 20 26 25 30 28 21 24 19 46 33 29 23 28 15 29 28 30 29 12 22 28 43 33 23 29 24 17 9 29 17 18 28 29 51 38 14 43 20 10 16 23 31 33 31 29 21 14 16 20 25 34 19 15 12 18 25 7 27 20 24 24 12 24 10 17 23 18 29 46 29 21 8 5 29 14 19 17 12 14 20 15 34 38 34 23 27 15 15 9 21 7 14 11 10 31 30 11 13 21 14 17 13 12 22 20 18 20 13 21 44 44 44 30 8 16 10 22 8 20 26 39 19 25 8 15 14 25 14 10 10 7 5 4 12 10 6 5 4 9 9 23 10 30 33 6 5 4 6 10 7 3 3 3 3 4 7 9 10 7 31 7 6 13 30 12 14 13 20 20 14 13 10 14 16 10 5 11 6 8 30 42 10 5 13 14 12 8 5 14 8 5 11 12 9 7 6 6 20 25 23 8 16 9 25 10 13 15 20 11 19 5 14 5 5 4 4 3 8 9 5 6 11 7 7 5 10 9 4 10 3 8 11 11 10 14 6 16 8 20 5 4 9 6 4 5 22 21 3 4 4 4 10 7 10 8 17 8 16 6 5 15 21 12 3 2 4 12 4 6 5 10 12	Open. Hide. 61 49 49 49 61 61 61 59 52 59 59 59 59 59 59 44 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 59 61 61 61 61 55 59 61 61 61 61 61 61 61 61 59 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 59 55 59 61 61 61 61 61 61 59 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 50 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 50 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 47 53 52 52 50 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 47 61 61 50 53 53 53 42 47 47 47 50 53 61 61 61 61 61 61 61 53 61 47 52 61 57 52 57 53 53 53 53 52 53 57 53 47 42 47 53 57 57 57 57 53 52 41 57 53 57 57 53 53 52 47 53 53 50 53 57 57 47 45 50 57 53 53 57 53 57 45 53 47 52 53 38 53 57 53 47 52 57 47 47 53 53 53 53 42 57 47 40 53 53 47 47 30 53 53 52 31 52 47 53 57 50 52 43 52 50 52 53 47 53 50 38 32 23 26 53 53 53 45 53 45 53 57 53 57 53 38 52 45 31 47 30 57 57 42 57 43 32 34 41 46 30 38 27 32 20 47 57 52 52 52 42 57 37 34 34 40 50 53 50 45 32 32 26 43 38 27 36 42 52 52 32 39 52 28 37 53 57 52 37 53 38 40 52 52 33 37 30 52 34 46 33 33 53 57 50 42 14 57 47 42 42 39 31 53 34 42 53 30 40 34 37 46 52 27 32 57 40 53 40 53 24 37 44 44 36 47 37 31 30 53 57 37 41 53 23 17 52 41 36 32 38 34 44 43 41 44 34 53 44 33 33 33 48 18 44 24 53 41 41 37 30 32 25 57 51 29 33 32 37 24 34 29 44 44 27 30 35 43 34 34 29 24 29 44 39 30 47 24 51 30 32 32 32 38 27 30 24 30 31 30 23 43 36 36 28 31 41 27 29 25 29 28 38 23 44 34 30 28 34 14 46 47 30 17 20 29 27 41 51 19 25 13 25 13 30 27 29 14 29 19 25 24 29 26 27 29 29 34 34 38 29 20 41 26 15 23 35 15 34 20 28 28 26 27 19 25 15 23 36 20 15 22 27 43 22 33 26 46 31 26 26 29 24 27 32 28 21 29 29 29 30 21 25 23 19 25 18 29 24 28 29 29 12 14 27 34 28 31 38 22 32 7 8 25 51 24 23 31 22 25 19 16 23 16 32 32 33 25 9 21 25 27 19 16 11 5 13 13 27 31 26 15 20 14 38 30 16 22 23 29 28 28 12 5 5 5 18 29 34 13 34 12 14 21 7 19 31 31 33 17 9 10 17 28 23 20 10 15 9 39 14 25 33 28 13 9 16 9 30 18 17 17 7 5 8 15 26 23 29 13 31 8 24 26 20 22 21 29 29 30 10 21 6 21 5 6 5 3 5 14 7 5 6 8 9 16 22 12 14 12 10 20 11 6 4 4 7 6 4 9 10 11 11 25 35 27 6 4 22 9 15 8 5 4 4 11 9 23 5 5 3 4 5 22 15 11 15 20 24 10 26 11 7 13 14 9 7 7 6 3 9 7 17 13 11 8 5 10 18 12 8 4 6 6 10 19 27 27 9 6 6 4 4 6 6 7 16 13 11 4 6 7 3 9 5 17 21 13 8 12 13 5 5 17 4 13 12 5 7 8 19 24 13 7 22 30 19 8 5 4 3 12 6 5 4 6 7 4 11 8 10 6 17 15 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_16752032_16753206
seq2: B6Ng01-042C17.b_46_1207 (reverse)

seq1  GCAGATTATACAAATGCTAAGAACTTTGGCTTCTAGTCTGATGCTGACTC  50
      ||||||  |||||||||||||||||   ||||| |||| |||||||||||
seq2  GCAGAT--TACAAATGCTAAGAACT---GCTTC-AGTC-GATGCTGACTC  43

seq1  GGTTTGACTGTGAGACTGTGGTCAAGTTATTCAAACAGATGTGATTATGA  100
      | || | |||  ||||||| |||||| |||   |||| ||| ||||||||
seq2  GATTGGCCTGGAAGACTGT-GTCAAG-TAT--CAACAAATG-GATTATGA  88

seq1  CTTTTCAACGGAAGGCTTGAAATAAGAATAATCTGTAACACTTTCAGTAC  150
      | |||| |||||||||||||||| ||||| ||| ||||||||||||||||
seq2  CCTTTCCACGGAAGGCTTGAAATTAGAATTATC-GTAACACTTTCAGTAC  137

seq1  TCA-CTGTATGCTAAACAACTCTTTTTAATCCAGTATTATTTCTATCTGC  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTATGCTAAACAACTCTTTTTAATCCAGTATTATTTCTATCTGC  187

seq1  ATTTCATATATGGAGAAATTGATTCTCAGGCCACCAGCTGGTAATGATAA  249
      |||||||||||| ||||||||| |||||||||||||||||||||||||||
seq2  ATTTCATATATGAAGAAATTGA-TCTCAGGCCACCAGCTGGTAATGATAA  236

seq1  ACCCAGATCTGACTTTATGGGACTACTTTATAGCTATATGCTAATTACTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGATCTGACTTTATGGGACTACTTTATAGCTATATGCTAATTACTT  286

seq1  AGAGAATTCCAACCATTCCCTAGTGATACTGCCATGCTGGAGGATGCTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATTCCAACCATTCCCTAGTGATACTGCCATGCTGGAGGATGCTGA  336

seq1  GGCAGCAGCTACTATTGTTAGTAAGGGGTGAGGATGATCTTCATAAATCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAGCTACTATTGTTAGTAAGGGGTGAGGATGATCTTCATAAATCC  386

seq1  TGATTATTAATGACAGTCTTGATTATTAAAAGACAGTGATAGATAAAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATTAATGACAGTCTTGATTATTAAAAGACAGTGATAGATAAAAGA  436

seq1  AACGTTAAGGTATTCTCAGTTATAAGGCCCAGCTGAGGGTCTCCTTGATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTAAGGTATTCTCAGTTATAAGGCCCAGCTGAGGGTCTCCTTGATG  486

seq1  TGTTAGAAAGGGCACTGAAATTGATTGTTCCTGTAGACCAGAACTCAATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAAAGGGCACTGAAATTGATTGTTCCTGTAGACCAGAACTCAATC  536

seq1  AAAGTCAAGAGCAGAACAATCCATGGAATTCTGACTTCAAAGCAAAGCAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAAGAGCAGAACAATCCATGGAATTCTGACTTCAAAGCAAAGCAC  586

seq1  CTTACAAATTGGGAGATAACAATGGAGGGTCTCAGAGTCAGACCTTGGTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAATTGGGAGATAACAATGGAGGGTCTCAGAGTCAGACCTTGGTC  636

seq1  CGGGATGCTGGATTATTATTCTCCTCAATCTTAAAAATTAGAAAAATTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGATGCTGGATTATTATTCTCCTCAATCTTAAAAATTAGAAAAATTTG  686

seq1  GCTCCATGGTACATGCAAGGTGATTGAATCTCAAGATAGCCAAGAGACTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCATGGTACATGCAAGGTGATTGAATCTCAAGATAGCCAAGAGACTG  736

seq1  CAGGAATCATAGGGACTGTGGGCAAGGACAGAAACAACTCCTGTTTAGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATCATAGGGACTGTGGGCAAGGACAGAAACAACTCCTGTTTAGAA  786

seq1  GCTCAAGCTGGACTTACAGGGAAGAGATTAGTGGAATCCTGGTGATTAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGCTGGACTTACAGGGAAGAGATTAGTGGAATCCTGGTGATTAGG  836

seq1  CACAGAATAGAAACCAAAATTCCTATCAGGTTATTTATTTGGTAGTATGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAATAGAAACCAAAATTCCTATCAGGTTATTTATTTGGTAGTATGG  886

seq1  TAGTTATACCATGCAGTCTAGAATGAAGTGGTATCGAGTAGTATGGTATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATACCATGCAGTCTAGAATGAAGTGGTATCGAGTAGTATGGTATG  936

seq1  GCAGTGAAGAATACTGTAATACAGAGCATTGTGCAGTACATCTGATGAGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGAAGAATACTGTAATACAGAGCATTGTGCAGTACATCTGATGAGG  986

seq1  AACAGTTAAGTTTAGTATAGTGTAGAATAGGTTGTGGGGTGCTTTTGGAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTAAGTTTAGTATAGTGTAGAATAGGTTGTGGGGTGCTTTTGGAT  1036

seq1  AACACAGCATGGGGGAATAATGATAGTGTCTGCTATGCTCCCTGTTGCAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGCATGGGGGAATAATGATAGTGTCTGCTATGCTCCCTGTTGCAC  1086

seq1  TCATTCTGCCTCAATGCAGTCTCATGTAATGCAGAAAAAGAAGACTATTG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTGCCTCAATGCAGTCTCATGTAATGCAGAAAAAGAAGACTATTG  1136

seq1  AGCTAGAATTCAGGACAATTGAATTC  1175
      ||||||||||||||||||||||||||
seq2  AGCTAGAATTCAGGACAATTGAATTC  1162

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information