BAC Information

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BAC

Clone NameB6Ng01-045K02
Chromosome13 (Build37)
Map Location 67,443,200 - 67,591,850
singlet/doubletdoublet
Overlap geneE130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817
Upstream geneLOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik
Downstream geneZfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045K02.bB6Ng01-045K02.g
ACCDH871031DH871032
length586657
definitionDH871031|Mus musculus domesticus DNA, BAC clone: B6Ng01-045K02, 5' end.DH871032|Mus musculus domesticus DNA, BAC clone: B6Ng01-045K02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,443,200 - 67,443,791)(67,591,121 - 67,591,850)
sequence
aaaaatatttgccacatttttttacatttgtatggtttctttccagaatg
aattctttgatgatccctaaatttgttgagcattttgacgtgttcttttc
atttgtaaatattctctacattgtgagttaattggtctagatacaggtat
aactttgtaaaggaggcttttccacgatcctcacttttgcatattttctt
tccagaatgagttatcaaataaggaaaaagaatctggaaagttctaaagg
atttacctgatacatcccaagtttagggtttctcacctgtgtggattctc
ttttcagaaagtacttatggacaatagaaggtcaggccacgtacttcata
tttgtaggacttctctcttgcatggattgttatgtttgtaaagtcgccac
tgataattgaagaccttgccacatacttcacacttgtagggattctcttc
tgtttgaactttcttatgtttctaaggtcctgatggataatcaaaggctt
tgccacacatttcacaactgtatggtttctttcttgtatgaattttcgta
cagtttgaaagtgttgatggggggtgggtatggggg
gaattcactcttaatagaaaatttgacaagtgatatgtgataaaaaatct
tgcaaaatattcagaccttgcccaagacaaaggaaatcattgagtagaga
agccatatgcctgtgaggaatgctgagtggtttaacatgaagtcaacact
ttctaccatcaataacgttcattctgcagagaaacttgcccaactgtgga
ggaagtgacaggcttttagtgtttcttcaaaccttaaataacaatgatct
tcttcctgaacattgacgttatcatttgaaggatgtagtagaggcattag
ttatcattcaatcctgattcaacctcaataattcattcctgacagaaact
gtacttatgtgcagaaaaagaccaaggcttagctacttatgtctatataa
gcatgaaagcctaacatctgaatgcgtgctttcctggatcatagtgcctt
atgggcctatctgggggctttttctttttctttttcttctactttttctt
ttcttttctcttcttttctttctctctttttggggggatggggcattttt
tttgattgttaactggtgtagtagtgtccagacaggacaagcatctccac
ctttggggaagttgttcttgggttacgtaagggatgggggtgggcaggag
acaaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67443200_67443791
seq2: B6Ng01-045K02.b_43_634

seq1  GAATTCAAAAATATTTGCCACATTTTTTTACATTTGTATGGTTTCTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAATATTTGCCACATTTTTTTACATTTGTATGGTTTCTTTCC  50

seq1  AGAATGAATTCTTTGATGATCCCTAAATTTGTTGAGCATTTTGACGTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAATTCTTTGATGATCCCTAAATTTGTTGAGCATTTTGACGTGTT  100

seq1  CTTTTCATTTGTAAATATTCTCTACATTGTGAGTTAATTGGTCTAGATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATTTGTAAATATTCTCTACATTGTGAGTTAATTGGTCTAGATAC  150

seq1  AGGTATAACTTTGTAAAGGAGGCTTTTCCACGATCCTCACTTTTGCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATAACTTTGTAAAGGAGGCTTTTCCACGATCCTCACTTTTGCATAT  200

seq1  TTTCTTTCCAGAATGAGTTATCAAATAAGGAAAAAGAATCTGGAAAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCCAGAATGAGTTATCAAATAAGGAAAAAGAATCTGGAAAGTTC  250

seq1  TAAAGGATTTACCTGATACATCCCAAGTTTAGGGTTTCTCACCTGTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGATTTACCTGATACATCCCAAGTTTAGGGTTTCTCACCTGTGTGG  300

seq1  ATTCTCTTTTCAGAAAGTACTTATGGACAATAGAAGGTCAGGCCACGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTTTCAGAAAGTACTTATGGACAATAGAAGGTCAGGCCACGTAC  350

seq1  TTCATATTTGTAGGACTTCTCTCTTGCATGGATTGTTATGTTTGTAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTTGTAGGACTTCTCTCTTGCATGGATTGTTATGTTTGTAAAGT  400

seq1  CGCCACTGATAATTGAAGACCTTGCCACATACTTCACACTTGTAGGGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCACTGATAATTGAAGACCTTGCCACATACTTCACACTTGTAGGGATT  450

seq1  CTCTTCTGTTTGAACTTTCTTATGTTTCTAAGGTCCTGATGGATAATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGTTTGAACTTTCTTATGTTTCTAAGGTCCTGATGGATAATCAA  500

seq1  AGGCTTTGCCACACATTTCACAACTGTATGGTTTCTTTCTTGTATGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTGCCACACATTTCACAACTGTATGGTTTCTTTCTTGTATGAATT  550

seq1  TTCGTACAGTTTGAAAGTGTTGATGGGGGGTGGGTATGGGGG  592
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTACAGTTTGAAAGTGTTGATGGGGGGTGGGTATGGGGG  592

seq1: chr13_67591121_67591850
seq2: B6Ng01-045K02.g_71_727 (reverse)

seq1  TATTTCAACATAAATGTCGCTGTCTCTTTTCCAGGGAAGTTAGGGCAGCA  50
                                                        
seq2  --------------------------------------------------  0

seq1  AGTGAAGCAGAAGCCATGCTTCCTGACGTATTAGTCTCCTGCCCA-CCCC  99
                                  |||| |||||||||||| ||||
seq2  ----------------------------TATTTGTCTCCTGCCCACCCCC  22

seq1  AT-CCTTACGTAACCCAGGAAC-ACTTCCCC-AAGGTGGCGATGCTTGTC  146
      || |||||||||||||| |||| |||||||| ||||||| ||||||||||
seq2  ATCCCTTACGTAACCCAAGAACAACTTCCCCAAAGGTGGAGATGCTTGTC  72

seq1  CTGTCTGGACACTACTACACCAGTTAACAATC-AAAAAAATGCCCCATCC  195
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTGTCTGGACACTACTACACCAGTTAACAATCAAAAAAAATGCCCCATCC  122

seq1  CCCCAAAAAGAGAGAAAGAAAAGAAGAGAAAAGAAAAGAAAAAGTAGAAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAAAGAGAGAAAGAAAAGAAGAGAAAAGAAAAGAAAAAGTAGAAG  172

seq1  AAAAAGAAAAAGAAAAAGCCCCCAGATAGGCCCATAAGGCACTATGATCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAAGAAAAAGCCCCCAGATAGGCCCATAAGGCACTATGATCC  222

seq1  AGGAAAGCACGCATTCAGATGTTAGGCTTTCATGCTTATATAGACATAAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGCACGCATTCAGATGTTAGGCTTTCATGCTTATATAGACATAAG  272

seq1  TAGCTAAGCCTTGGTCTTTTTCTGCACATAAGTACAGTTTCTGTCAGGAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAAGCCTTGGTCTTTTTCTGCACATAAGTACAGTTTCTGTCAGGAA  322

seq1  TGAATTATTGAGGTTGAATCAGGATTGAATGATAACTAATGCCTCTACTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTATTGAGGTTGAATCAGGATTGAATGATAACTAATGCCTCTACTA  372

seq1  CATCCTTCAAATGATAACGTCAATGTTCAGGAAGAAGATCATTGTTATTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTCAAATGATAACGTCAATGTTCAGGAAGAAGATCATTGTTATTT  422

seq1  AAGGTTTGAAGAAACACTAAAAGCCTGTCACTTCCTCCACAGTTGGGCAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTGAAGAAACACTAAAAGCCTGTCACTTCCTCCACAGTTGGGCAA  472

seq1  GTTTCTCTGCAGAATGAACGTTATTGATGGTAGAAAGTGTTGACTTCATG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTGCAGAATGAACGTTATTGATGGTAGAAAGTGTTGACTTCATG  522

seq1  TTAAACCACTCAGCATTCCTCACAGGCATATGGCTTCTCTACTCAATGAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCACTCAGCATTCCTCACAGGCATATGGCTTCTCTACTCAATGAT  572

seq1  TTCCTTTGTCTTGGGCAAGGTCTGAATATTTTGCAAGATTTTTTATCACA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGTCTTGGGCAAGGTCTGAATATTTTGCAAGATTTTTTATCACA  622

seq1  TATCACTTGTCAAATTTTCTATTAAGAGTGAATTC  730
      |||||||||||||||||||||||||||||||||||
seq2  TATCACTTGTCAAATTTTCTATTAAGAGTGAATTC  657