BAC Information

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BAC

Clone NameB6Ng01-045M07
Chromosome13 (Build37)
Map Location 50,682,939 - 50,683,534
singlet/doubletsinglet
Overlap genenone
Upstream geneCenpp, Omd, Ogn, Nol8, Iars, LOC667488, LOC670357, EG638833, Gm272, EG667503, EG667507, LOC100040099, LOC625110, LOC676907, LOC667546, LOC667552, LOC100040085, LOC100040159, LOC100040176, LOC100040118, Gm906, 2310081J21Rik, LOC676954, LOC667625, LOC667632, EG667637, Fbxw17, Gm806, EG639044
Downstream geneGm904, LOC100040315, EG667693, LOC100040161, LOC100040190, EG667712, LOC676997, EG667717, Spin1, 4930519N16Rik, EG667728, LOC667733, Ppia-ps13_636.1, LOC625524, Edg3, Shc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045M07.bB6Ng01-045M07.g
ACCDH871131DH871132
length6001,019
definitionDH871131|Mus musculus domesticus DNA, BAC clone: B6Ng01-045M07, 5' end.DH871132|Mus musculus domesticus DNA, BAC clone: B6Ng01-045M07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaacaagactaaatcttagcagtgaacacaggaggttaggcag
caaggtctgattcctagcaatgtatgtgaggtagggtggtctcacagggt
ataagacttagtattgtatgtggggtgaggtagagtggatttaccagcat
agactgaaacatagcagcatctttatgagtgatgggtacagggagggaat
gtgtccaacagggtcggataaaaacccattacacaatagtgaggatttgg
ttccctgagcatctgttttatgacagtatatatagggatctaagtgcttg
ccagcagcacttgcaatctaccagtttacgtggggcagggcccagtaggt
cctgagttatggatggttgtatccacccagttatatgcagctggagttga
tagcttctagtgtatatgatatatctgtgagggaggtgtcagcaatgtct
gatacctataagtttataatatttataatatcgactctcccatgctgctg
ccccaaatacaatgataatttttcaggcagggttggacacactcatttta
gaacccatgttaatgtttaaggtgtcaggactcataggacaacacaccat

gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctacatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtaatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaaaggtttatcta
tctttgttgattttctcaaagaaccaactcctcgtttggttaaattcttg
aatagttcttcttgtttccactgggtgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgatttgttttttttttttctagggc
ttttagatgtgtgtcaagctgctagtatgtgctgtctccgtttctctgag
gcactcagcgctatgatttcctcttaaatgcttcatttgtcccatagttg
ggcctttggcttcatttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_50682939_50683534
seq2: B6Ng01-045M07.b_45_643

seq1  GAATTCCTAACAAGACTAAATCTTAGCAGTGAACACAGGAGGTTAGGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACAAGACTAAATCTTAGCAGTGAACACAGGAGGTTAGGCAG  50

seq1  CAAGGTCTGATTCCTAGCAATGTATGTGAGGTAGGGTGGTCTCACAGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCTGATTCCTAGCAATGTATGTGAGGTAGGGTGGTCTCACAGGGT  100

seq1  ATAAGACTTAGTATTGTATGTGGGGTGAGGTAGAGTGGATTTACCAGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACTTAGTATTGTATGTGGGGTGAGGTAGAGTGGATTTACCAGCAT  150

seq1  AGACTGAAACATAGCAGCATCTTTATGAGTGATGGGTACAGGGAGGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAAACATAGCAGCATCTTTATGAGTGATGGGTACAGGGAGGGAAT  200

seq1  GTGTCCAACAGGGTCGGATAAAAACCCATTACACAATAGTGAGGATTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCAACAGGGTCGGATAAAAACCCATTACACAATAGTGAGGATTTGG  250

seq1  TTCCCTGAGCATCTGTTTTATGACAGTATATATAGGGATCTAAGTGCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGAGCATCTGTTTTATGACAGTATATATAGGGATCTAAGTGCTTG  300

seq1  CCAGCAGCACTTGCAATCTACCAGTTTACGTGGGGCAGGGCCCAGTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGCACTTGCAATCTACCAGTTTACGTGGGGCAGGGCCCAGTAGGT  350

seq1  CCTGAGTTATGGATGGTTGTATCCACCCAGTTATATGCAGCTGGAGTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTTATGGATGGTTGTATCCACCCAGTTATATGCAGCTGGAGTTGA  400

seq1  TAGCTTCTAGTGTATATGATATATCTGTGAGGGAGGTGTCAGCAATGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCTAGTGTATATGATATATCTGTGAGGGAGGTGTCAGCAATGTCT  450

seq1  GATACCTATAAGTTTATAATATTTATAATATCGACTCTCCCATGCTGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTATAAGTTTATAATATTTATAATATCGACTCTCCCATGCTGCTG  500

seq1  CCCCAAATACAATGATAA-TTTTCAGGCAGGGTTGGACACACTCA-TTTA  548
      |||||||||||||||||| |||||||||||||||||||||||||| ||||
seq2  CCCCAAATACAATGATAATTTTTCAGGCAGGGTTGGACACACTCATTTTA  550

seq1  GAACCCATG-TAATGTTTAAGGTGTCAGGACTCAAAGGACAACACACCA  596
      ||||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  GAACCCATGTTAATGTTTAAGGTGTCAGGACTCATAGGACAACACACCA  599