BAC Information

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BAC

Clone NameB6Ng01-046M13
Chromosome13 (Build37)
Map Location 111,775,470 - 111,776,545
singlet/doubletsinglet
Overlap geneLOC668159
Upstream geneLOC100040577, Rab3c, EG432803, 9830130M13Rik, Plk2, LOC100040614
Downstream gene4732495G21Rik, LOC100040640, EG621953, Gpbp1, LOC100040666, Mier3, Map3k1, LOC668181
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046M13.bB6Ng01-046M13.g
ACCDH871841DH871842
length1,0481,111
definitionDH871841|Mus musculus domesticus DNA, BAC clone: B6Ng01-046M13, 5' end.DH871842|Mus musculus domesticus DNA, BAC clone: B6Ng01-046M13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatagtggaaaggttatcttgtattatacagccaggaccaatgt
aattccaaggacatttttcaggacaaaaagcaggaggctcaaagttagag
aaggaaatttaacgacaaaagtagatgccagagtaaaagttctgctgaaa
aaggacatgagccaggaaatgcaggaaacccctagcagctagaaaaggtg
agtaatggtctttcctctcagtgtcccaccatgaaatacagacttgccag
caccttgacttcatcccataagactaattttaaatttcttacatttgtaa
ttgtaccataatacatttatgctgtgttaggtacagtagaactaggaact
aacagcagtaacaggtttattatgtttgatcccctgaaaaatctagaaca
taaaaaaaggtgagttggagcagggaggggacacttatgaatacttaagt
actagagaaaccagggcattgcagtatgttgattgtcaccttagaggctt
gctcttgtaacaaataaaacaatagtgttgaagtgtgtccagccagcctt
attcatttgctatttcttctttctccttttcccttactccctctttattc
tatgtcttttgaaacagagtctcatgtattccctagattgtccttgaact
cactatatggctaaatttaaccttgtatttctgaccctctggactccacc
tctagtgctgagattgcacgtgtttgctcatacaggatcagcagtttatg
tgggcagtggcaatctgctgcagtcagccactcatgcttgcgggataaga
gcctcactgacagccattcctctttaacgtcattgctgttgcgaagtggg
agaagaggacatccctgatggatcacaataaagaaaggagaatctcagtg
ctcacatgacactctagacactatgactcagtgctgctgtgactcatctc
tatactgcctactcagagatagaagactaccccaccaccacagtcatgtg
atcattcataaaaggcatactgtactcctaaactaatgcagagtcatt
gaattcctgtcctttggagtttctgtctggtgaaagccatgtatagataa
tcctgtcactgtagagactcttcaatagagataccaccatagtgctgcag
gacagagtgacccattgaaccaagagagtatgatgatttcagaggacagt
aacatctcagtagctcttaaaggttcagtagactgttgtctggcaatgga
aggactttattctgaaggttgcatgtcacagctatggaatgctacaaggg
ctcaggatgttcacaggagttgggcgtgatgtggagtgcatttgtgtact
agggtaggctcaggatgcaagtggaaaaattggagtcacaactgagaaat
tcagcatattttgtgctttacctcagtcagaagtttggtttggatagtga
gtgagttgattagcacatgaagagagaccctggcagtttgaagaggtcca
gctgctagaaaatttaaattatctgggaggggagagactctcaggactca
aagggagggaccttagatgaaatgccccacagtagggagagagaacttat
agagcccacctccagcaggaagacagggcatcaactgagggatggggttg
acatcccacagtcacaactctgacccaaaatcgttcctgtctgaaagaat
tagagggatggaaatggagaggagcctgaggaaaagaagttccagctaca
ggcccaaagtgggattcagctgaagggaaagtcccaaggcctgacactat
tactgacgctatggagcactcatagcaagggacctatcatgactgtcctc
caaaagactcaacaaacaatggaaagagtcagatgtgatatttgtaccca
accaatggacagaagcaactgacccttgttgtgaatagggaaggctgaaa
gaagctgaggaaaaggctattctgttggaggacagcagtcttaataatct
ggaccccgagatctctcaaatactggacaccaaacagacagcatttacag
ctgattggagcccacccaaatacagtagaagactgttggtctgtgttcat
ctagaatgatcacttactctcaagaaactggagttaaggtccatgggaag
gaggggggggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_111775470_111776545
seq2: B6Ng01-046M13.b_44_1091

seq1  GAATTCTATAGTGGAAAGGTTATCTTGTATTATACAGCCAGGACCAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAGTGGAAAGGTTATCTTGTATTATACAGCCAGGACCAATGT  50

seq1  AATTCCAAGGACATTTTTCAGGACAAAAAGCAGGAGGCTCAAAGTTAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAAGGACATTTTTCAGGACAAAAAGCAGGAGGCTCAAAGTTAGAG  100

seq1  AAGGAAATTTAACGACAAAAGTAGATGCCAGAGTAAAAGTTCTGCTGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATTTAACGACAAAAGTAGATGCCAGAGTAAAAGTTCTGCTGAAA  150

seq1  AAGGACATGAGCCAGGAAATGCAGGAAACCCCTAGCAGCTAGAAAAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACATGAGCCAGGAAATGCAGGAAACCCCTAGCAGCTAGAAAAGGTG  200

seq1  AGTAATGGTCTTTCCTCTCAGTGTCCCACCATGAAATACAGACTTGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGGTCTTTCCTCTCAGTGTCCCACCATGAAATACAGACTTGCCAG  250

seq1  CACCTTGACTTCATCCCATAAGACTAATTTTAAATTTCTTACATTTGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGACTTCATCCCATAAGACTAATTTTAAATTTCTTACATTTGTAA  300

seq1  TTGTACCATAATACATTTATGCTGTGTTAGGTACAGTAGAACTAGGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACCATAATACATTTATGCTGTGTTAGGTACAGTAGAACTAGGAACT  350

seq1  AACAGCAGTAACAGGTTTATTATGTTTGATCCCCTGAAAAATCTAGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAGTAACAGGTTTATTATGTTTGATCCCCTGAAAAATCTAGAACA  400

seq1  TAAAAAAAGGTGAGTTGGAGCAGGGAGGGGACACTTATGAATACTTAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAGGTGAGTTGGAGCAGGGAGGGGACACTTATGAATACTTAAGT  450

seq1  ACTAGAGAAACCAGGGCATTGCAGTATGTTGATTGTCACCTTAGAGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGAAACCAGGGCATTGCAGTATGTTGATTGTCACCTTAGAGGCTT  500

seq1  GCTCTTGTAACAAATAAAACAATAGTGTTGAAGTGTGTCCAGCCAGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGTAACAAATAAAACAATAGTGTTGAAGTGTGTCCAGCCAGCCTT  550

seq1  ATTCATTTGCTATTTCTTCTTTCTCCTTTTCCCTTACTCCCTCTTTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTGCTATTTCTTCTTTCTCCTTTTCCCTTACTCCCTCTTTATTC  600

seq1  TATGTCTTTTGAAACAGAGTCTCATGTATTCCCTAGATTGTCCTTGAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTTTGAAACAGAGTCTCATGTATTCCCTAGATTGTCCTTGAACT  650

seq1  CACTATATGGCTAAATTTAACCTTGTATTTCTGACCCTCTGGACTCCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATATGGCTAAATTTAACCTTGTATTTCTGACCCTCTGGACTCCACC  700

seq1  TCTAGTGCTGAGATTGCAGGTGTTTGCTCATACAGGATCAGCAGTTTATG  750
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTAGTGCTGAGATTGCACGTGTTTGCTCATACAGGATCAGCAGTTTATG  750

seq1  TGGGCAGTGGCAATCTGCTGCAGTCAGCCACTCATGCTTGCGGGATAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGTGGCAATCTGCTGCAGTCAGCCACTCATGCTTGCGGGATAAGA  800

seq1  GCCTCACTGACAGCCATTCCTCTTTAACGTCATTGCTGTTGCGAAGTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACTGACAGCCATTCCTCTTTAACGTCATTGCTGTTGCGAAGTGGG  850

seq1  AGAAGGAGGACATCCCTGATGGATCACAATAAAGAAAAGGAGAAATCTCA  900
      |||| ||||||||||||||||||||||||||||| ||||||| |||||||
seq2  AGAA-GAGGACATCCCTGATGGATCACAATAAAG-AAAGGAG-AATCTCA  897

seq1  GTGCTCACATGACCACCTCTTAGACACTATTGAACTCAGTGCCTGCTGTG  950
      |||||||||||||   ||| ||||||||||   |||||||| ||||||||
seq2  GTGCTCACATGAC--ACTC-TAGACACTAT--GACTCAGTG-CTGCTGTG  941

seq1  ACTCATCCTCTAATACTGCCCTAACTCAGGAGAATAGAAGACTACCCCAC  1000
      |||||| |||| ||||||||   ||||| ||| |||||||||||||||||
seq2  ACTCAT-CTCT-ATACTGCC--TACTCA-GAG-ATAGAAGACTACCCCAC  985

seq1  CACCACCAAGTTCATTGTGAATTCATTTCATAAAAAGGCATACTGTACTC  1050
      ||||||  || ||| |||||  ||| ||||| ||||||||||||||||||
seq2  CACCAC--AG-TCA-TGTGA--TCA-TTCAT-AAAAGGCATACTGTACTC  1027

seq1  ATAAAACTAAATGCAGGAAGGTCATT  1076
       | ||||| |||||||    ||||||
seq2  CT-AAACT-AATGCAG---AGTCATT  1048