BAC Information

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BAC

Clone NameB6Ng01-050G23
Chromosome13 (Build37)
Map Location 48,597,137 - 48,741,215
singlet/doubletdoublet
Overlap geneZfp169, A830005F24Rik, AW456874
Upstream gene4931429P17Rik, Id4, LOC667351
Downstream geneBarx1, Phf2, EG667415, BC010304, C030044B11Rik, Wnk2, Ninj1, 1110007C09Rik, Susd3, Fgd3, Bicd2, Ippk, Cenpp, Tes3-ps, Ecm2, Aspn, Omd, Ogn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050G23.bB6Ng01-050G23.g
ACCDH874380DH874381
length988989
definitionDH874380|Mus musculus domesticus DNA, BAC clone: B6Ng01-050G23, 5' end.DH874381|Mus musculus domesticus DNA, BAC clone: B6Ng01-050G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,740,251 - 48,741,215)(48,597,137 - 48,598,136)
sequence
gaattctggcctttgcttacaaccagcctccagtattttgtctattataa
tggtgttagtggagtgtcattggtttccttcaaataagaatctcagctgg
gcgtggtggcacacgcctttaatcccagcactcaggaggcagaggcaggc
ggatttctgagttcgaggccagcctggtctacaaagtgagttccaggaca
gccagggttatacagagaaaccctgtctcaaaaaaccaaaaccaaaaaca
acaacaacaacaacaacaaaaatctcagcaggctttaggtagaaagttga
aagctgattctattgtttatagtgaggcaaaaataggaaaaactattttg
aagaaacaagttttacttaatttaagagttgtcttatagtcctaatagta
gctgggcttggtagtgcaggcgattgattccagcactcaggaggcagagg
caggctgatctctatgattttgacaacagcttggtctacatagcaacttc
tgggctgcataattagaccttgtctgaaaaaacgaaatccctatagtagc
aagtgtgggttagcatagggacagacctatgaaatcagcagaacacagta
gtacacatagtgactcaatgaggggaagggagttcttgccagtaagtcat
tccatatgcaagagctagaaaacaggaacaatctcccgagctggagggac
atatgctctgtaagcgttttatgctttgcaggccaaaacaactctgttgg
aggtactcagtactctatcagaggtactcagctcagactccaagcactag
aacagctaacaatactgcacacttaaaccatgtgggttgtggcccacacg
tgccttggcttacaaaatcacatagagttctaataccgctttgtgtccca
gccatgggctggaaggagcaaaggaaaaaaaatctgagttgggtagattt
ctttgatggttctcagtcattaaaaaagcctatcataa
gaattctaccctcaagtcactggcactttggtacgaacggggttgaacct
tttggtcacaggtggtactgtcatccaatcacaagcatggggagtctttc
tccatgcaggcctggccccgcttagcttctcccagtcattcaggatgcca
agactgtaagcaaaagcctgtgtacttcttgaagtcttttttttttttcc
cagaaatgcttttgtgaacaaatctttggcttccttggtaaatttatttc
taggaatttttgggtgctattttgaaagaattgtttcttctttattcaca
aacagatcagtggtaagatagagtgtgcaagttggttatatatactgcag
attttattactctgatgaatttgctaactctaaccatctttttttctctg
gaaatgttattcgactcatgatggcctaatcaaatgcctggaatttttct
ttctcagggtgctagaagtcaactggaagtgttaatgcagggcctcgtct
gttctcaagacagtgtcttgtaaacttcacaggggacgcacaccaatctc
atagggaagggagggacaaaggagacataaggggccaaattagttctctt
taggccctttataagtcagtaacttctgccccgatgacttaatctcttcc
cccagatcctctcttgtttcaacaaaagactcttggggaaaatacacaga
cgaaggagaagtcctcaacagctttaaggtattggctcaggttccgagta
aagagatcatttcactctttcttactaatttgctatctcaatgactcgta
gtggctttcagataagaaatcagcttaatcacacagggactctcttatgg
gaaatgagtcacctctcatttaactgcttccaaagttctgtctgtggtta
taaaatcgtggtgtggtgtttgtttggttggttaatgtttatctactggg
gctgtgggctctacagggacgagatcatgtcacgacctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_48740251_48741215
seq2: B6Ng01-050G23.b_47_1007 (reverse)

seq1  AACCATCAAAGAAATCTAACCCAAACTCAGATTTTTTTTTCCTTTGCTTC  50
      ||||||||||||||||||  || |||||||| ||||||||||||||| ||
seq2  AACCATCAAAGAAATCTA--CCCAACTCAGA-TTTTTTTTCCTTTGC-TC  46

seq1  CTTCCAGCCCATGGCTTGGGACACAAAGCTGTATTAGAACTCTATGTGAT  100
      ||||||||||||||| ||||||||||||| ||||||||||||||||||| 
seq2  CTTCCAGCCCATGGC-TGGGACACAAAGCGGTATTAGAACTCTATGTGA-  94

seq1  TTTTGTAAGCC-AGGCACGTGTGGGACACAA-CCACATTGGTTAAGTGTG  148
      ||||||||||| ||||||||||||| ||||| |||||| | |||||||||
seq2  TTTTGTAAGCCAAGGCACGTGTGGGCCACAACCCACATGGTTTAAGTGTG  144

seq1  CAGTATTGTTAGCTGTTCTAGTGCTTTGGAGTCTGAGCTGAGTACCTCTG  198
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAGTATTGTTAGCTGTTCTAGTGC-TTGGAGTCTGAGCTGAGTACCTCTG  193

seq1  ATAGAGTACTGAGTACCTCCAACAGAGTTGTTTTGGCCTGCAAAGCATAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTACTGAGTACCTCCAACAGAGTTGTTTTGGCCTGCAAAGCATAA  243

seq1  AACGCTTACAGAGCATATGTCCCTCCAGCTCGGGAGATTGTTCCTG-TTT  297
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AACGCTTACAGAGCATATGTCCCTCCAGCTCGGGAGATTGTTCCTGTTTT  293

seq1  CTAGCTCTTGCATATGGAATGACTTACTGGCAAGAACTCCCTTCCCCTCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCTTGCATATGGAATGACTTACTGGCAAGAACTCCCTTCCCCTCA  343

seq1  TTGAGTCACTATGTGTACTACTGTGTTCTGCTGATTTCATAGGTCTGTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCACTATGTGTACTACTGTGTTCTGCTGATTTCATAGGTCTGTCC  393

seq1  CTATGCTAACCCACACTTGCTACTATAGGGATTTCGTTTTTTCAGACAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTAACCCACACTTGCTACTATAGGGATTTCGTTTTTTCAGACAAG  443

seq1  GTCTAATTATGCAGCCCAGAAGTTGCTATGTAGACCAAGCTGTTGTCAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAATTATGCAGCCCAGAAGTTGCTATGTAGACCAAGCTGTTGTCAAA  493

seq1  ATCATAGAGATCAGCCTGCCTCTGCCTCCTGAGTGCTGGAATCAATCGCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGAGATCAGCCTGCCTCTGCCTCCTGAGTGCTGGAATCAATCGCC  543

seq1  TGCACTACCAAGCCCAGCTACTATTAGGACTATAAGACAACTCTTAAATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTACCAAGCCCAGCTACTATTAGGACTATAAGACAACTCTTAAATT  593

seq1  AAGTAAAACTTGTTTCTTCAAAATAGTTTTTCCTATTTTTGCCTCACTAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAACTTGTTTCTTCAAAATAGTTTTTCCTATTTTTGCCTCACTAT  643

seq1  AAACAATAGAATCAGCTTTCAACTTTCTACCTAAAGCCTGCTGAGATTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATAGAATCAGCTTTCAACTTTCTACCTAAAGCCTGCTGAGATTTT  693

seq1  TGTTGTTGTTGTTGTTGTTGTTTTTGGTTTTGGTTTTTTGAGACAGGGTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTGTTGTTGTTGTTTTTGGTTTTGGTTTTTTGAGACAGGGTT  743

seq1  TCTCTGTATAACCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTATAACCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGG  793

seq1  CCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAA  843

seq1  AGGCGTGTGCCACCACGCCCAGCTGAGATTCTTATTTGAAGGAAACCAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGTGTGCCACCACGCCCAGCTGAGATTCTTATTTGAAGGAAACCAAT  893

seq1  GACACTCCACTAACACCATTATAATAGACAAAATACTGGAGGCTGGTTGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTCCACTAACACCATTATAATAGACAAAATACTGGAGGCTGGTTGT  943

seq1  AAGCAAAGGCCAGAATTC  965
      ||||||||||||||||||
seq2  AAGCAAAGGCCAGAATTC  961

seq1: chr13_48597137_48598136
seq2: B6Ng01-050G23.g_67_1055

seq1  GAATTCTACCCTCAAGTCACTGGCACTTTGGTACGAACGGGGTTGAACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCCTCAAGTCACTGGCACTTTGGTACGAACGGGGTTGAACCT  50

seq1  TTTGGTCACAGGTGGTACTGTCATCCAATCACAAGCATGGGGAGTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCACAGGTGGTACTGTCATCCAATCACAAGCATGGGGAGTCTTTC  100

seq1  TCCATGCAGGCCTGGCCCCGCTTAGCTTCTCCCAGTCATTCAGGATGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCAGGCCTGGCCCCGCTTAGCTTCTCCCAGTCATTCAGGATGCCA  150

seq1  AGACTGTAAGCAAAAGCCTGTGTACTTCTTGAAGTCTTTTTTTTTTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTAAGCAAAAGCCTGTGTACTTCTTGAAGTCTTTTTTTTTTTTCC  200

seq1  CAGAAATGCTTTTGTGAACAAATCTTTGGCTTCCTTGGTAAATTTATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATGCTTTTGTGAACAAATCTTTGGCTTCCTTGGTAAATTTATTTC  250

seq1  TAGGAATTTTTGGGTGCTATTTTGAAAGAATTGTTTCTTCTTTATTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATTTTTGGGTGCTATTTTGAAAGAATTGTTTCTTCTTTATTCACA  300

seq1  AACAGATCAGTGGTAAGATAGAGTGTGCAAGTTGGTTATATATACTGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATCAGTGGTAAGATAGAGTGTGCAAGTTGGTTATATATACTGCAG  350

seq1  ATTTTATTACTCTGATGAATTTGCTAACTCTAACCATCTTTTTTTCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTACTCTGATGAATTTGCTAACTCTAACCATCTTTTTTTCTCTG  400

seq1  GAAATGTTATTCGACTCATGATGGCCTAATCAAATGCCTGGAATTTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTTATTCGACTCATGATGGCCTAATCAAATGCCTGGAATTTTTCT  450

seq1  TTCTCAGGGTGCTAGAAGTCAACTGGAAGTGTTAATGCAGGGCCTCGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGGGTGCTAGAAGTCAACTGGAAGTGTTAATGCAGGGCCTCGTCT  500

seq1  GTTCTCAAGACAGTGTCTTGTAAACTTCACAGGGGACGCACACCAATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAAGACAGTGTCTTGTAAACTTCACAGGGGACGCACACCAATCTC  550

seq1  ATAGGGAAGGGAGGGACAAAGGAGACATAAGGGGCCAAATTAGTTCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGAAGGGAGGGACAAAGGAGACATAAGGGGCCAAATTAGTTCTCTT  600

seq1  TAGGCCCTTTATAAGTCAGTAACTTCTGCCCCGATGACTTAATCTCTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCCTTTATAAGTCAGTAACTTCTGCCCCGATGACTTAATCTCTTCC  650

seq1  CCCAGATCCTCTCTTGTTTCAACAAAAGACTCTTGGGGAAAATACACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGATCCTCTCTTGTTTCAACAAAAGACTCTTGGGGAAAATACACAGA  700

seq1  CGAAGGAGAAGTCCTCAACAGCTTTAAGGTATTGGCTCAGGTTCCGAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGGAGAAGTCCTCAACAGCTTTAAGGTATTGGCTCAGGTTCCGAGTA  750

seq1  AAGAGATCATTTCACTCTTTCTTACTAATTTGCTATCTCAATGACTCGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATCATTTCACTCTTTCTTACTAATTTGCTATCTCAATGACTCGTA  800

seq1  GTGGCTTTCAGATAAGAAATCAGCTTAATCACACAGGGACTCTCTTATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTTCAGATAAGAAATCAGCTTAATCACACAGGGACTCTCTTATGG  850

seq1  GAAATGAGTCACCTCTCATTTAACTGCTTCCAAAAGTTCTGTCTGTGGTT  900
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAAATGAGTCACCTCTCATTTAACTGCTTCC-AAAGTTCTGTCTGTGGTT  899

seq1  ATTAAAATCGTGGTGTGGTGTTTTGTTTGGTTTGGTTAATGTTTATCTTA  950
      | |||||||||||||||||| ||||||||| |||||||||||||||| ||
seq2  A-TAAAATCGTGGTGTGGTG-TTTGTTTGG-TTGGTTAATGTTTATC-TA  945

seq1  CTTGGTGTCTGTGGGCTTCTTACAGGTAC-AGATCATTGTTCACCGACCT  999
      ||  | | |||||||||   |||||| || |||||||   ||| ||||||
seq2  CT--GGGGCTGTGGGCT--CTACAGGGACGAGATCAT--GTCA-CGACCT  988

seq1  T  1000
      |
seq2  T  989