BAC Information

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BAC

Clone NameB6Ng01-050M21
Chromosome13 (Build37)
Map Location 70,137,577 - 70,276,398
singlet/doubletdoublet
Overlap geneEG620143, LOC100042291
Upstream geneAdcy2, LOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260, 3110006E14Rik, 4930547H16Rik, Med10
Downstream gene4930520P13Rik, EG633042, BC018507, EG620473, Adamts16, 8030423J24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050M21.bB6Ng01-050M21.g
ACCDH874641DH874642
length1,039314
definitionDH874641|Mus musculus domesticus DNA, BAC clone: B6Ng01-050M21, 5' end.DH874642|Mus musculus domesticus DNA, BAC clone: B6Ng01-050M21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,275,350 - 70,276,398)(70,137,577 - 70,137,890)
sequence
gaattcacccgcaaatcccctgaaaacttctggaagagtcaatgaagaag
gaagaagaaactggcagcaagaattgatcactagaagctttagaagtaag
gtatttgttttatcaggccactcgtgtctcaggctcatcttgaattcatt
ctgcagctcagcttggactgcaaggaggataggtgtgtatcaccatggct
gtttgtatttgatgctgcaaatggagctcagggctttgcgtgttgtcagc
taagctactacccactcagttccatccctagctctagaacgggctgtcaa
cattcataggggcaaaccttcatgtcactgtctgggtttggacagactta
cagaattggaaatctttaaggggtggccactgcagtgtcttgatgaccac
aaacgatcctggaatcaggaaaaataaaaaggaaaatgaagaaataaatc
ctgaggaacacaagcaagctcctgggggatctgtatgaaacccgacagtc
ttccacactgtagaagaggcaattcctttgtgtgctcattattgatggag
gatggggtaagtaccatcccgtagcatcccgtgaaagtgttgcagcaggc
aggaggtgtgggatgcctgctttctcatagctgcctccaaatgagaagtg
atcgccatgcacggggcctgcagagtcccttccttactttgtttctaaag
taaaggaagtcttagtagatctttatcacatctattatatgaaacttgct
tgtatttaatgcatgattttagttttaaacacatttgtgatgactttcaa
tgtttagaatgaggaggggtagaggatccacacattttgggatccctctt
atctctatttaaaaaacaaacatgggggggcggttcacagaccactattt
agacataatatcattaccatggtacttatattttcaaacgttttagaata
agataaagttaaataaaatatatcagcaagtttggcggacctatgcaatt
atggcgaaggaatgctttgtttatatccaaggagcagca
ttttcaagatttatttaacaattcttaacttgctaagacttcaatttctc
atgtgtgtactcaggagaagtacagcagaaggacagtgcaaagcactctg
ggatgtgagaacagacagtgctgtggggatactgtgggtggtgtggaggt
gcaggggcccagcctctctctgacattcctgcttgaagtgttgactttag
ctttaaccttgtcacttcttggacaggtaggacagagtggaaggccacag
cacaggtccctgaatatcgctgagcttccaggatcctgagcagagtggag
ggggaggatgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_70275350_70276398
seq2: B6Ng01-050M21.b_45_1083 (reverse)

seq1  TGCTGCTGCTTGGATATAAACAAAGCATTCCTCTGCATAAATTGCATTAG  50
      ||||||| ||||||||||||||||||||||||  ||   ||||||| |||
seq2  TGCTGCTCCTTGGATATAAACAAAGCATTCCTTCGCCATAATTGCA-TAG  49

seq1  TTCTGCCAAACTTTGCTGATAATATTTTATTTAACTTTATCTGTATTTTA  100
       || ||||||| |||||||| ||||||||||||||||||||| |||| | 
seq2  GTCCGCCAAAC-TTGCTGAT-ATATTTTATTTAACTTTATCT-TATTCT-  95

seq1  AAAACCTTTGACATATATAAGGTACCCATGGTTATTGATATTATTGTCTT  150
      ||||| ||||| | |||||| ||| |||||| || |||||||| |||| |
seq2  AAAACGTTTGA-AAATATAA-GTA-CCATGG-TAATGATATTA-TGTC-T  139

seq1  AAATAGTGGTCTGTGAACCGCCCCCCCATGTTTGTTTTTTAAATAGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTGGTCTGTGAACCGCCCCCCCATGTTTGTTTTTTAAATAGAGAT  189

seq1  AAGAGGGATCCC-AAATGTGTGGATTCTTCTACCCCTCCTCATTCTAAAC  249
      |||||||||||| ||||||||||| || ||||||||||||||||||||||
seq2  AAGAGGGATCCCAAAATGTGTGGA-TCCTCTACCCCTCCTCATTCTAAAC  238

seq1  ATTG-AAGTCATCACAAATGTGTTTAAAACTAAAATCATGCATTAAATAC  298
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGTCATCACAAATGTGTTTAAAACTAAAATCATGCATTAAATAC  288

seq1  AAGCAAGTTTCATATAATAGATGTGATAAAGATCTACTAAGACTTCCTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGTTTCATATAATAGATGTGATAAAGATCTACTAAGACTTCCTTT  338

seq1  ACTTTAGAAACAAAGTAAGGAAGGGACTCTGCAGGCCCCGTGCATGGCGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGAAACAAAGTAAGGAAGGGACTCTGCAGGCCCCGTGCATGGCGA  388

seq1  TCACTTCTCATTTGGAGGCAGCTATGAGAAAGCAGGCATCCCACACCTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCTCATTTGGAGGCAGCTATGAGAAAGCAGGCATCCCACACCTCC  438

seq1  TGCCTGCTGCAACACTTTCACGGGATGCTACGGGATGGTACTTACCCCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCTGCAACACTTTCACGGGATGCTACGGGATGGTACTTACCCCAT  488

seq1  CCTCCATCAATAATGAGCACACAAAGGAATTGCCTCTTCTACAGTGTGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATCAATAATGAGCACACAAAGGAATTGCCTCTTCTACAGTGTGGA  538

seq1  AGACTGTCGGGTTTCATACAGATCCCCCAGGAGCTTGCTTGTGTTCCTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTCGGGTTTCATACAGATCCCCCAGGAGCTTGCTTGTGTTCCTCA  588

seq1  GGATTTATTTCTTCATTTTCCTTTTTATTTTTCCTGATTCCAGGATCGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTATTTCTTCATTTTCCTTTTTATTTTTCCTGATTCCAGGATCGTT  638

seq1  TGTGGTCATCAAGACACTGCAGTGGCCACCCCTTAAAGATTTCCAATTCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCATCAAGACACTGCAGTGGCCACCCCTTAAAGATTTCCAATTCT  688

seq1  GTAAGTCTGTCCAAACCCAGACAGTGACATGAAGGTTTGCCCCTATGAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTCTGTCCAAACCCAGACAGTGACATGAAGGTTTGCCCCTATGAAT  738

seq1  GTTGACAGCCCGTTCTAGAGCTAGGGATGGAACTGAGTGGGTAGTAGCTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACAGCCCGTTCTAGAGCTAGGGATGGAACTGAGTGGGTAGTAGCTT  788

seq1  AGCTGACAACACGCAAAGCCCTGAGCTCCATTTGCAGCATCAAATACAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACAACACGCAAAGCCCTGAGCTCCATTTGCAGCATCAAATACAAA  838

seq1  CAGCCATGGTGATACACACCTATCCTCCTTGCAGTCCAAGCTGAGCTGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATGGTGATACACACCTATCCTCCTTGCAGTCCAAGCTGAGCTGCA  888

seq1  GAATGAATTCAAGATGAGCCTGAGACACGAGTGGCCTGATAAAACAAATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATTCAAGATGAGCCTGAGACACGAGTGGCCTGATAAAACAAATA  938

seq1  CCTTACTTCTAAAGCTTCTAGTGATCAATTCTTGCTGCCAGTTTCTTCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACTTCTAAAGCTTCTAGTGATCAATTCTTGCTGCCAGTTTCTTCTT  988

seq1  CCTTCTTCATTGACTCTTCCAGAAGTTTTCAGGGGATTTGCGGGTGAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTCATTGACTCTTCCAGAAGTTTTCAGGGGATTTGCGGGTGAATT  1038

seq1  C  1049
      |
seq2  C  1039

seq1: chr13_70137577_70137890
seq2: B6Ng01-050M21.g_74_387

seq1  TTTTCAAGATTTATTTAACAATTCTTAACTTGCTAAGACTTCAATTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAGATTTATTTAACAATTCTTAACTTGCTAAGACTTCAATTTCTC  50

seq1  ATGTGTGTACTCAGGAGAAGTACAGCAGAAGGACAGTGCAAAGCACTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTACTCAGGAGAAGTACAGCAGAAGGACAGTGCAAAGCACTCTG  100

seq1  GGATGTGAGAACAGACAGTGCTGTGGGGATACTGTGGGTGGTGTGGAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGAGAACAGACAGTGCTGTGGGGATACTGTGGGTGGTGTGGAGGT  150

seq1  GCAGGGGCCCAGCCTCTCTCTGACATTCCTGCTTGAAGTGTTGACTTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGCCCAGCCTCTCTCTGACATTCCTGCTTGAAGTGTTGACTTTAG  200

seq1  CTTTAACCTTGTCACTTCTTGGACAGGTAGGACAGAGTGGAAGGCCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACCTTGTCACTTCTTGGACAGGTAGGACAGAGTGGAAGGCCACAG  250

seq1  CACAGGTCCCTGAATATCGCTGAGCTTCCAGGATCCTGAGCAGAGTGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTCCCTGAATATCGCTGAGCTTCCAGGATCCTGAGCAGAGTGGAG  300

seq1  GGGGAGGATGGGTG  314
      ||||||||||||||
seq2  GGGGAGGATGGGTG  314