BAC Information

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BAC

Clone NameB6Ng01-051K12
Chromosome13 (Build37)
Map Location 67,515,769 - 67,618,472
singlet/doubletdoublet
Overlap geneZfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87
Upstream gene2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik
Downstream geneZfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051K12.bB6Ng01-051K12.g
ACCDH875232DH875233
length1,1831,061
definitionDH875232|Mus musculus domesticus DNA, BAC clone: B6Ng01-051K12, 5' end.DH875233|Mus musculus domesticus DNA, BAC clone: B6Ng01-051K12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,617,269 - 67,618,472)(67,515,769 - 67,516,841)
sequence
gaattcatactggagagaaaccctaccagtgtgaagagtgtgggaaaaca
ttctactatcgttcaaacctgaagggacatcagattattcattctggagt
gaaaccctacaagtgtgaagtatgtgggagcatgtttagaactagctcag
acctttctaagcaccagaggatccatgcggaagtgaagctgtacagttgt
gaggagtgcgggaaagccttttctactcattcgtacctcattcggcacaa
attgggccactctagagagaaaccatacaaatgcgaagagtgtggcaaaa
cattttgttatccttcaatccttaaggaacatcaacgaattcattctgga
gtgaaaccttacaattgtgaaatatgtggcagcatgtttagaactcgctc
cgaactttctaagcaccagagaatccatgctgaagtgaagctctacaact
gtgaggagtgcgggaaagccttttctactcactcctaccttatgaggcat
agacttggtcactctggagagaagccctacaaatgtgaagagtgtgggaa
atcctatagctacccttcactccttaaggaacatcaaagaattcattctc
agaatccctataagtgtgacgtgtgtgggaaggttttttgtactcgctca
ggacgttctaaacaccagagaattcacaccggagagaaaccttacaagtg
tgaagactgtgggaagggattctcgactcactcataccttactctgcaca
aattacttcataccggagagaaacctttcaaatgggaagaatgtggtgag
gttttctatacctgctgaagacttactaaacatcagaaattcacattggc
gaaaaccctacaaaggtaaagaatgtgtcaaaactctttactgtacttca
gactttaaataataccataaaactcatactgaagagaaaccatactttaa
ttagggcttcgtagatacaaggtacgtcctactgtagaggaactttacag
atgtgggagaatgtggacaatattttaccgtacttccactttacagccag
caaggctcattctcagaagattccttcagggttgagtatgggacaagtat
tatttgcttacttgaagcttttgtctactgaacatgaatcctggagaaac
ctgcgaagtgtgaatttgaaagtttttactcat
gaattcagtagcgacacaaagcacagtgacaagggacaggagatggagga
ggcaaggggtagaacactaaaggaagaactcatagactaatattcaaggt
tctgaacataccaggagaccagcatgcaaaggactaaccatactgtttga
gatttttaaatagaacaatcactctgctgtttctttagccaagttcctga
catcactctgctctttctttagccatgttcccacatcactctgctctttc
tttagccatgtccctgacatcactctgctctttctttagccatgttccca
catcactctgctctttctttagccatgttcccacatcactctgctctttc
tttagccatgttcccacatcactctgctctttctttagccatgttcccac
atcactctgctctttctttagccatgttcccacatcactctgctctttct
ttagccatgttcccacatcactctgctctttctttagccatgttcccaca
tcactctgctcttctttagccatgttcccattcttcctattctcgggtgg
gtacagagccatgtttgtgagcaatgttccctaaagcatgtttttttgcg
ccgtgtatcacagtgccgtagcagagaaatacatttgctgatgctagttt
attatttcaagaatttggaatttcaggacccacttttcataattccttga
gtaaagtcccagaattacctataaaatgagtcatacattacttttccttt
ttcactaattcatgacaacatcaggaattcatgtattaatttggtatttt
gttataattgcgtgagttggctgtgaattgttgcatgccggcctgcggcc
tatttgaaacgggtacacctgggaggcaggctaggggctgaagagactta
gatggagagaggttaatggagaccagacataattctgttcaaagcccgcc
agtttactaagagagtgtgcttatagggggaaggcccatgttctgcagtc
attcctggtgtctggacagccagtagggacatgcagataggatgttcctt
gaatatctcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67617269_67618472
seq2: B6Ng01-051K12.b_48_1230 (reverse)

seq1  ATGAGTTAAAAAACTTTCCAAATTTTTCACACTT-GCAGAGTTTCTCTCC  49
      ||||||  |||||||||| ||    ||||||||| |||| |||  |||||
seq2  ATGAGT--AAAAACTTTCAAA----TTCACACTTCGCAG-GTT--TCTCC  41

seq1  AGGATACATGTTCTGGTAGACAGAAAGC-TCAAGGTAGCACATAATACCT  98
      ||||| |||||||  ||||||| ||||| |||||  |||| |||||| ||
seq2  AGGATTCATGTTC-AGTAGACA-AAAGCTTCAAGTAAGCAAATAATA-CT  88

seq1  TGTCCCATACTTCACACTTGAAGGGATTCTTCTGAGAATGAGCCCTTTTG  148
      |||||||||| |||  | |||| ||| |||||||||||||||||   |||
seq2  TGTCCCATAC-TCAACCCTGAA-GGAATCTTCTGAGAATGAGCC---TTG  133

seq1  CTGGCTGTTAAAGTTGTGAAGTACGGTAAAATATTTGTCCACATTCT-CC  197
      ||||||| ||||||   |||||||||||||||| ||||||||||||| ||
seq2  CTGGCTG-TAAAGT--GGAAGTACGGTAAAATA-TTGTCCACATTCTCCC  179

seq1  ACATCTGTAAAGTTTCTCTACAGTAGGACGTACCTTGTATCTAACGAAGC  247
      |||||||||||||| ||||||||||||||||||||||||||| |||||||
seq2  ACATCTGTAAAGTTCCTCTACAGTAGGACGTACCTTGTATCT-ACGAAGC  228

seq1  CCTAATTAAAGTATGGTTTCTCTTCAGTATGAGTTTTTATGGTATTATTT  297
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCTAATTAAAGTATGGTTTCTCTTCAGTATGAG-TTTTATGGTATTATTT  277

seq1  AAAGTCTGAAGTACAGTAAAGAGTTTTGACACATTCTTTACCTTTGTAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTGAAGTACAGTAAAGAGTTTTGACACATTCTTTACCTTTGTAGG  327

seq1  GTTTTCGCCAATGTGAATTTCCTGATGTTTAGTAAGTCTTCAGCAGGTAT  397
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTTTTCGCCAATGTGAATTT-CTGATGTTTAGTAAGTCTTCAGCAGGTAT  376

seq1  AGAAAACCTCACCACATTCTTCCCATTTGAAAGGTTTCTCTCCGGTATGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACCTCACCACATTCTTCCCATTTGAAAGGTTTCTCTCCGGTATGA  426

seq1  AGTAATTTGTGCAGAGTAAGGTATGAGTGAGTCGAGAATCCCTTCCCACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTTGTGCAGAGTAAGGTATGAGTGAGTCGAGAATCCCTTCCCACA  476

seq1  GTCTTCACACTTGTAAGGTTTCTCTCCGGTGTGAATTCTCTGGTGTTTAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCACACTTGTAAGGTTTCTCTCCGGTGTGAATTCTCTGGTGTTTAG  526

seq1  AACGTCCTGAGCGAGTACAAAAAACCTTCCCACACACGTCACACTTATAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTCCTGAGCGAGTACAAAAAACCTTCCCACACACGTCACACTTATAG  576

seq1  GGATTCTGAGAATGAATTCTTTGATGTTCCTTAAGGAGTGAAGGGTAGCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTGAGAATGAATTCTTTGATGTTCCTTAAGGAGTGAAGGGTAGCT  626

seq1  ATAGGATTTCCCACACTCTTCACATTTGTAGGGCTTCTCTCCAGAGTGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATTTCCCACACTCTTCACATTTGTAGGGCTTCTCTCCAGAGTGAC  676

seq1  CAAGTCTATGCCTCATAAGGTAGGAGTGAGTAGAAAAGGCTTTCCCGCAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTATGCCTCATAAGGTAGGAGTGAGTAGAAAAGGCTTTCCCGCAC  726

seq1  TCCTCACAGTTGTAGAGCTTCACTTCAGCATGGATTCTCTGGTGCTTAGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACAGTTGTAGAGCTTCACTTCAGCATGGATTCTCTGGTGCTTAGA  776

seq1  AAGTTCGGAGCGAGTTCTAAACATGCTGCCACATATTTCACAATTGTAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCGGAGCGAGTTCTAAACATGCTGCCACATATTTCACAATTGTAAG  826

seq1  GTTTCACTCCAGAATGAATTCGTTGATGTTCCTTAAGGATTGAAGGATAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACTCCAGAATGAATTCGTTGATGTTCCTTAAGGATTGAAGGATAA  876

seq1  CAAAATGTTTTGCCACACTCTTCGCATTTGTATGGTTTCTCTCTAGAGTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTTTTGCCACACTCTTCGCATTTGTATGGTTTCTCTCTAGAGTG  926

seq1  GCCCAATTTGTGCCGAATGAGGTACGAATGAGTAGAAAAGGCTTTCCCGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAATTTGTGCCGAATGAGGTACGAATGAGTAGAAAAGGCTTTCCCGC  976

seq1  ACTCCTCACAACTGTACAGCTTCACTTCCGCATGGATCCTCTGGTGCTTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCACAACTGTACAGCTTCACTTCCGCATGGATCCTCTGGTGCTTA  1026

seq1  GAAAGGTCTGAGCTAGTTCTAAACATGCTCCCACATACTTCACACTTGTA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTCTGAGCTAGTTCTAAACATGCTCCCACATACTTCACACTTGTA  1076

seq1  GGGTTTCACTCCAGAATGAATAATCTGATGTCCCTTCAGGTTTGAACGAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCACTCCAGAATGAATAATCTGATGTCCCTTCAGGTTTGAACGAT  1126

seq1  AGTAGAATGTTTTCCCACACTCTTCACACTGGTAGGGTTTCTCTCCAGTA  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAATGTTTTCCCACACTCTTCACACTGGTAGGGTTTCTCTCCAGTA  1176

seq1  TGAATTC  1204
      |||||||
seq2  TGAATTC  1183

seq1: chr13_67515769_67516841
seq2: B6Ng01-051K12.g_65_1125

seq1  GAATTCAGTAGCGACACAAAGCACAGTGACAAGGGACAGGAGATGGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGCGACACAAAGCACAGTGACAAGGGACAGGAGATGGAGGA  50

seq1  GGCAAGGGGTAGAACACTAAAGGAAGAACTCATAGACTAATATTCAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGGGTAGAACACTAAAGGAAGAACTCATAGACTAATATTCAAGGT  100

seq1  TCTGAACATACCAGGAGACCAGCATGCAAAGGACTAACCATACTGTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACATACCAGGAGACCAGCATGCAAAGGACTAACCATACTGTTTGA  150

seq1  GATTTTTAAATAGAACAATCACTCTGCTGTTTCTTTAGCCAAGTTCCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTAAATAGAACAATCACTCTGCTGTTTCTTTAGCCAAGTTCCTGA  200

seq1  CATCACTCTGCTCTTTCTTTAGCCATGTTCCCACATCACTCTGCTCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTCTGCTCTTTCTTTAGCCATGTTCCCACATCACTCTGCTCTTTC  250

seq1  TTTAGCCATGTCCCTGACATCACTCTGCTCTTTCTTTAGCCATGTTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCCATGTCCCTGACATCACTCTGCTCTTTCTTTAGCCATGTTCCCA  300

seq1  CATCACTCTGCTCTTTCTTTAGCCATGTTCCCACATCACTCTGCTCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTCTGCTCTTTCTTTAGCCATGTTCCCACATCACTCTGCTCTTTC  350

seq1  TTTAGCCATGTTCCCACATCACTCTGCTCTTTCTTTAGCCATGTTCCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCCATGTTCCCACATCACTCTGCTCTTTCTTTAGCCATGTTCCCAC  400

seq1  ATCACTCTGCTCTTTCTTTAGCCATGTTCCCACATCACTCTGCTCTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCTGCTCTTTCTTTAGCCATGTTCCCACATCACTCTGCTCTTTCT  450

seq1  TTAGCCATGTTCCCACATCACTCTGCTCTTTCTTTAGCCATGTTCCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCATGTTCCCACATCACTCTGCTCTTTCTTTAGCCATGTTCCCACA  500

seq1  TCACTCTGCTCTTCTTTAGCCATGTTCCCATTCTTCCTATTCTCGGGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTGCTCTTCTTTAGCCATGTTCCCATTCTTCCTATTCTCGGGTGG  550

seq1  GTACAGAGCCATGTTTGTGAGCAATGTTCCCTAAAGCATGTTTTTTTGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGAGCCATGTTTGTGAGCAATGTTCCCTAAAGCATGTTTTTTTGCG  600

seq1  CCGTGTATCACAGTGCCGTAGCAGAGAAATACATTTGCTGATGCTAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGTATCACAGTGCCGTAGCAGAGAAATACATTTGCTGATGCTAGTTT  650

seq1  ATTATTTCAAGAATTTGGAATTTCAGGACCCACTTTTCATAATTCCTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTCAAGAATTTGGAATTTCAGGACCCACTTTTCATAATTCCTTGA  700

seq1  GTAAAGTCCCAGAATTACCTATAAAATGAGTCATACATTACTTTTCCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTCCCAGAATTACCTATAAAATGAGTCATACATTACTTTTCCTTT  750

seq1  TTCACTAATTCATGACAACATCAGGAATTCATGTATTAATTTGGTATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTAATTCATGACAACATCAGGAATTCATGTATTAATTTGGTATTTT  800

seq1  GTTATAATTGCGTGAGTTGGCTGTGAATTGTTGCATGCCGGCCTGCGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAATTGCGTGAGTTGGCTGTGAATTGTTGCATGCCGGCCTGCGGCC  850

seq1  TATTTGAAACGGGTACACCTGGGAGGCAGGCTAGGGGCTGAAAGAGACTT  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TATTTGAAACGGGTACACCTGGGAGGCAGGCTAGGGGCTG-AAGAGACTT  899

seq1  AGATGGAGAGAGGTTAATGGAGACCAAGACATAATTCTGTTCAAAGCCCG  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGATGGAGAGAGGTTAATGGAGACC-AGACATAATTCTGTTCAAAGCCCG  948

seq1  CCAGTTTACTAAGAGAGTGTGCTTATAAGGGGGGAAGGCCCATGTTCTGC  1000
      |||||||||||||||||||||||||||  |||||||||||||||||||| 
seq2  CCAGTTTACTAAGAGAGTGTGCTTATA--GGGGGAAGGCCCATGTTCTG-  995

seq1  CAGTCCATTCCTGGTGTCTGGAACCAGCCAGTAGGGGACATGCAGAATAG  1050
      |||| |||||||||||||||||  ||||||||| ||||||||||| ||||
seq2  CAGT-CATTCCTGGTGTCTGGA--CAGCCAGTA-GGGACATGCAG-ATAG  1040

seq1  GATGTTCCCCTGGAATATCTCAG  1073
      ||||||  ||| |||||||||||
seq2  GATGTT--CCTTGAATATCTCAG  1061