BAC Information

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BAC

Clone NameB6Ng01-052A22
Chromosome13 (Build37)
Map Location 82,215,382 - 82,215,936
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666984, Gpr98, Lysmd3, Polr3g, 2900024O10Rik, Cetn3
Downstream geneLOC238756, LOC667018
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052A22.bB6Ng01-052A22.g
ACCDH875524DH875525
length1,243549
definitionDH875524|Mus musculus domesticus DNA, BAC clone: B6Ng01-052A22, 5' end.DH875525|Mus musculus domesticus DNA, BAC clone: B6Ng01-052A22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaattctgaacatatattctcctaacacaagggaatccacatt
cataaaaggaactttactaaagctcaaagaacacattgtacatcacacaa
taatagtagaagacttcaacacttcactctcatcaatggacagatcaagg
aaacagaaactaaacagagacacagtgaaactaacagaagttatgaaaca
aatggacttaacagatatctatagaacattttatccaaaaaaaaaaagaa
cataacaacttctcagcacttaacagaaccttcttcaaaattgaccatac
aatttgtcacaaaacagtcctgaacagactatagtattgaaataatccca
tgcatcctatcaaatcatcatggactaatgctggtcttcaacaacataaa
caatagaaagcccagatagacatggaagctgaacagcactctactcaatg
ataacatggtcaaggaagaagtaaagaaagaaattaaagacttttgggaa
tttaatgaaaaaggaaggcacaacatgaccaaatttatggggcacagtga
aaatagtgccaagaggaaaactcatggctctgattacctgcaaaaagaaa
ctggagagagcatacactagcaacttgacagcacatctgaaagctctaga
actaaaagaagcaaataaccccaagacaattagacaggaggaaataatca
aacacagggctgaaatcaaccaagtagaaacaaaaagaactatacaaaaa
aaaaaaaatcaaccaaaccaggagctgggtctgtgagaaaatcaacaaga
tagatcaactcttagccagacaaaccagagtgcacagagacagtgtctga
attaacaaaatcagaaacaaaaagggagacataattacagaaactgagga
aattgaacaattcatcaaatcctactacaaagcccatagtcaacaaactg
gaaacctggatgaaatacacaattttctagagagacaccagataccaaag
taaatgaggatcagataacatctaacagctctacatctcctagataatag
aagactcattgtctccatcaaaaggcccaggactagacgagttatgcaga
gttcatcgaccttcaaagaagagtatactaaactcctcattcaggaagta
ccattgttcatactctgatcaaaaccacaagactacaagagagaaaccga
accattccttagaaatttagtgccaatactcactctaaaagtg
ctatggggattcttaaatatataacttgtattttataagggtgggacata
tctgggaccccagcaggagactacaacgccacttgaaataatacagcaac
catataaagaattattttatgtataacaatatttttcctcatgtaaatca
agaacaaagtttgatttttcctgtatgcatagaattgatgaccgagcaag
aaccactggatcattttcaaataaagtttaataagtgtttcaatcttgat
gctattgtaattatttaccataattataaaagaaagggaattataattac
attgataaaatggatgtgaaaacccagtattttcttattatttatatttc
ctaagtattctatatagataatgaaggttaatgtttaattcatttcacaa
ataatgcatgtcgaaaagaaaacttcagagataaaaatataagtattgaa
tggaccgaatcaagttattaggctttattagtttttctaattctttactg
attgtgaactttgaatgactgctctgctgttttgggggggggtggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_82215382_82215936
seq2: B6Ng01-052A22.g_64_618

seq1  GAATTCCTATGGGGATTCTTAAATATATAACTTGTATTTTATAAGGGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATGGGGATTCTTAAATATATAACTTGTATTTTATAAGGGTGG  50

seq1  GACATATCTGGGACCCCAGCAGGAGACTACAACGCCACTTGAAATAATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATCTGGGACCCCAGCAGGAGACTACAACGCCACTTGAAATAATAC  100

seq1  AGCAACCATATAAAGAATTATTTTATGTATAACAATATTTTTCCTCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCATATAAAGAATTATTTTATGTATAACAATATTTTTCCTCATGT  150

seq1  AAATCAAGAACAAAGTTTGATTTTTCCTGTATGCATAGAATTGATGACCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAGAACAAAGTTTGATTTTTCCTGTATGCATAGAATTGATGACCG  200

seq1  AGCAAGAACCACTGGATCATTTTCAAATAAAGTTTAATAAGTGTTTCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAACCACTGGATCATTTTCAAATAAAGTTTAATAAGTGTTTCAAT  250

seq1  CTTGATGCTATTGTAATTATTTACCATAATTATAAAAGAAAGGGAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGCTATTGTAATTATTTACCATAATTATAAAAGAAAGGGAATTAT  300

seq1  AATTACATTGATAAAATGGATGTGAAAACCCAGTATTTTCTTATTATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACATTGATAAAATGGATGTGAAAACCCAGTATTTTCTTATTATTTA  350

seq1  TATTTCCTAAGTATTCTATATAGATAATGAAGGTTAATGTTTAATTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTAAGTATTCTATATAGATAATGAAGGTTAATGTTTAATTCATT  400

seq1  TCACAAATAATGCATGTCGAAAAGAAAACTTCAGAGATAAAAATATAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAATAATGCATGTCGAAAAGAAAACTTCAGAGATAAAAATATAAGT  450

seq1  ATTGAATGGACCGAATCAAGTTATTAGGCTTTATTAGTTTTTCTAATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATGGACCGAATCAAGTTATTAGGCTTTATTAGTTTTTCTAATTCT  500

seq1  TTACTGATTGTGAACTTTGAATGACTGCTCTGCTGTTTTGGGGGGGGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGATTGTGAACTTTGAATGACTGCTCTGCTGTTTTGGGGGGGGGTG  550

seq1  GGGTG  555
      |||||
seq2  GGGTG  555