BAC Information

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BAC

Clone NameB6Ng01-053D13
Chromosome13 (Build37)
Map Location 14,655,009 - 14,656,102
singlet/doubletsinglet
Overlap genenone
Upstream geneLyst, LOC100039831, Gng4, EG665000, EG665008, LOC630894, LOC100040205, B3galnt2, Tbce, Ggps1, LOC100040243, Arid4b, LOC100039916, Hecw1
Downstream geneMrpl32, Psma2, AW209491, EG665099, LOC670994, EG625121, Gli3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053D13.bB6Ng01-053D13.g
ACCDH876334DH876335
length1,1601,089
definitionDH876334|Mus musculus domesticus DNA, BAC clone: B6Ng01-053D13, 5' end.DH876335|Mus musculus domesticus DNA, BAC clone: B6Ng01-053D13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctagcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatcgacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttccaaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagagggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactagcatatccgggcatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatcacatggccccat
gaaggagctagagaaagtaccaaagaagctaaggaatctccaccctatag
gtggaacaacattatgaactaccagtaccccgagctctgactcttagctg
acatgcatcaaagatggcctagtcggcatcctgaaggagaggccattgtc
cgcaacttatatggccagtacaggaacgccaagctataatgggaatgggt
gggtaggaga
gaattctatcagacgtaatttgttcttgtgagtgagtaaattgctaggaa
gaccaattatgtatttagtacatgaatagttttaattactttgtaaaaat
gtgtagttgattaaaaaaactgatttttggcatcttttaacaatattgtt
ttacaatagcaccagtcttgtgaaatgtggttagatacaaagcaaagggt
cttagagatttctggtttcatatatctataaggcaaactgttcaccaaac
aaacaccagtactaacttgataaaagaaaagcaaccgttattttttatcc
attgtttatgttctattgaccaaaaataaatttccagataattctgtaga
ggaaaatagatggcttcagttacatcagtttttagtgtgaatgaaagttc
tcgggaagaagctaaacacaccttccacggactctcctgttgggctaatt
agctaatcagaacatactgtgcaatattcagcatgttaaagggccacata
caaattatcttgtactctctctagccactttaataccagcttattgtctt
cccctatttgtaagcttacatctttatgatcaccctatttaaaaaaaaat
cagtgtaatgccatgtgtgtacagatgcactgaaaggccagaagagagtg
gaggattccctggagatgaatttacaggtgctgtgagccacccagcatgg
ataccaggaatcaaactcaagatcctcctaaagaggagcagaggatctaa
ctgctgagcatctcccaagaccaggtaaatccttttgaatgtataaacag
acccctagctctaccagtcaaaagggttaggatcctctgagcgagtatct
gaggcagggagcagaggttgctcaatttacttctactgagctagcagttg
tttctagcatgtgttcttaaagttcttgttttatagctttctttgttgct
tctatgaaagcatatcaaattgtaatcactttggtatatagcatttactg
agccaaatcttttctttctagaccatcatcgctcatatttggctccagaa
taaactgcttattcctcttggtggtgagcgtcgtggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_14655009_14656102
seq2: B6Ng01-053D13.g_69_1157

seq1  GAATTCTATCAGACGTAATTTGTTCTTGTGAGTGAGTAAATTGCTAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCAGACGTAATTTGTTCTTGTGAGTGAGTAAATTGCTAGGAA  50

seq1  GACCAATTATGTATTTAGTACATGAATAGTTTTAATTACTTTGTAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATTATGTATTTAGTACATGAATAGTTTTAATTACTTTGTAAAAAT  100

seq1  GTGTAGTTGATTAAAAAAACTGATTTTTGGCATCTTTTAACAATATTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTTGATTAAAAAAACTGATTTTTGGCATCTTTTAACAATATTGTT  150

seq1  TTACAATAGCACCAGTCTTGTGAAATGTGGTTAGATACAAAGCAAAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATAGCACCAGTCTTGTGAAATGTGGTTAGATACAAAGCAAAGGGT  200

seq1  CTTAGAGATTTCTGGTTTCATATATCTATAAGGCAAACTGTTCACCAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGATTTCTGGTTTCATATATCTATAAGGCAAACTGTTCACCAAAC  250

seq1  AAACACCAGTACTAACTTGATAAAAGAAAAGCAACCGTTATTTTTTATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCAGTACTAACTTGATAAAAGAAAAGCAACCGTTATTTTTTATCC  300

seq1  ATTGTTTATGTTCTATTGACCAAAAATAAATTTCCAGATAATTCTGTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTATGTTCTATTGACCAAAAATAAATTTCCAGATAATTCTGTAGA  350

seq1  GGAAAATAGATGGCTTCAGTTACATCAGTTTTTAGTGTGAATGAAAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAGATGGCTTCAGTTACATCAGTTTTTAGTGTGAATGAAAGTTC  400

seq1  TCGGGAAGAAGCTAAACACACCTTCCACGGACTCTCCTGTTGGGCTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGAAGAAGCTAAACACACCTTCCACGGACTCTCCTGTTGGGCTAATT  450

seq1  AGCTAATCAGAACATACTGTGCAATATTCAGCATGTTAAAGGGCCACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATCAGAACATACTGTGCAATATTCAGCATGTTAAAGGGCCACATA  500

seq1  CAAATTATCTTGTACTCTCTCTAGCCACTTTAATACCAGCTTATTGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATCTTGTACTCTCTCTAGCCACTTTAATACCAGCTTATTGTCTT  550

seq1  CCCCTATTTGTAAGCTTACATCTTTATGATCACCCTATTTAAAAAAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTATTTGTAAGCTTACATCTTTATGATCACCCTATTTAAAAAAAAAT  600

seq1  CAGTGTAATGCCATGTGTGTACAGATGCACTGAAAGGCCAGAAGAGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTAATGCCATGTGTGTACAGATGCACTGAAAGGCCAGAAGAGAGTG  650

seq1  GAGGATTCCCTGGAGATGAATTTACAGGTGCTGTGAGCCACCCAGCATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTCCCTGGAGATGAATTTACAGGTGCTGTGAGCCACCCAGCATGG  700

seq1  ATACCAGGAATCAAACTCAAGATCCTCCTAAAGAGGAGCAGAGGATCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGGAATCAAACTCAAGATCCTCCTAAAGAGGAGCAGAGGATCTAA  750

seq1  CTGCTGAGCATCTCCCAAGACCAGGTAAATCCTTTTGAATGTATAAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGAGCATCTCCCAAGACCAGGTAAATCCTTTTGAATGTATAAACAG  800

seq1  ACCCCTAGCTCTACCAGTCAAAAGGGTTAGGATCCTCTGAGCGAGTATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTAGCTCTACCAGTCAAAAGGGTTAGGATCCTCTGAGCGAGTATCT  850

seq1  GAGGCAGGGAGCAGAGGTTGCTCAAATTTACTTCTACTGAGCTAGCAGTT  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAGGCAGGGAGCAGAGGTTGCTC-AATTTACTTCTACTGAGCTAGCAGTT  899

seq1  GTTTCTAGCAATGTGTTCTTAAAGTTTCTTGTTTTATAGCTTTCTTTGTT  950
      ||||||||| |||||||||||||| |||||||||||||||||||||||||
seq2  GTTTCTAGC-ATGTGTTCTTAAAG-TTCTTGTTTTATAGCTTTCTTTGTT  947

seq1  GCTTCTATGAAAGCATAATCAAATTGTAATCACTTTGGTATATAGCATTT  1000
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GCTTCTATGAAAGCAT-ATCAAATTGTAATCACTTTGGTATATAGCATTT  996

seq1  ACTGTAGCCAAAATCTTTCTTTCTAGACCATCATCGCTCATATTTGGCTC  1050
      |||| |||||||   |||||||||||||||||||||||||||||||||||
seq2  ACTG-AGCCAAATCTTTTCTTTCTAGACCATCATCGCTCATATTTGGCTC  1045

seq1  CAGAATAAACTGTCTTA-TCCTCTTGGTGGTGAGCGTCGTGGTTT  1094
      |||||||||||| |||| |||||||||||||||||||||||||||
seq2  CAGAATAAACTG-CTTATTCCTCTTGGTGGTGAGCGTCGTGGTTT  1089