BAC Information

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BAC

Clone NameB6Ng01-053I24
Chromosome13 (Build37)
Map Location 43,912,500 - 43,913,431
singlet/doubletsinglet
Overlap genenone
Upstream genePhactr1, Tbc1d7, Gfod1, Sirt5, Nol7, Ranbp9, LOC637627, Ccdc90a, Rnf182, LOC100039403, Cd83
Downstream geneLOC100039432, A730030A06, EG637868, EG667157, Jarid2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053I24.bB6Ng01-053I24.g
ACCDH876573DH876574
length842935
definitionDH876573|Mus musculus domesticus DNA, BAC clone: B6Ng01-053I24, 5' end.DH876574|Mus musculus domesticus DNA, BAC clone: B6Ng01-053I24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgctgtgatttgaatgactccacaccaagttcatgtgttagaa
agtaaatcccaaagttcatttgttaataggtaacaggacacgaggccttt
gggaggtaagcagagtaagatgaatgaggtcatgaggtgaggtggtgttg
gtggctttgtgacaccattcagagcagccagctaagcattctctccgaca
tgttatgagtcatataagacactccgcagctagctccacgctcttagatt
tcccaacttaaagaaccaaaaaagacactccttttctttctaagttaacc
tgtaatgatattttattacagggttaggaaatgcagtccagatcttcccc
cttggtccatagctcttctgacggtatgagcatagagtgatcagaggtca
gagaccaaccctagagtcaggtttctcataaatgcgggtcgtgagtattg
gactcaagtcatcaggcttggccttaactgacccatctaagaattcctga
ttatgcttccttttggtccttgcttcttacttataaacatgtttgttttg
aagaacagaggccaatttgcagaagacaatattgactgacgttgtgtagg
caatatcccaacactctttgggaaatctcagccttctcacaatcttgaga
ttgaagaataaacatctcctcccatccaaccttctttaccaggagtcact
tcagagtctctggccaaggacagaggagggtttttagcctcaagtttctg
taacaatgaatagtattgggccctgtgctagtcagatttctgtcttatag
caaaggacttgaagaaacaaatcttatgaaaaacagtttatt
gaattctactcaaccatcttgtattctgtgttttagcttcccttcaataa
acactggtggcctctaatgctggagtctttgttgggttttagggagcagg
tgagttcgttgctcactggcatccccttttggagacacctaagatacaca
ctgtcaggttttctttatgcctgttctgacttcattttctaagtcattca
agacaaaatataagctagcggtctcttggatgacatctaggccccagaat
gctgtataattagccaaggaattggtgggtgtgacctagacaacatacag
agaaataatccctaaagattctttgttaactcattaggaaacagcagagc
attgcaatggggaagaggaggtgccctagcaaccttaccgtggtcctgga
ggtggatgcaggggaaagttttaataagcaaatgaagaggatgacagggg
atgctttggtcaataatccttggcaacagaatcaatagcaagagtgacat
cagtctgagattaagcagacagcggttggacagatgcccttgcaagagta
tttttacataaggttgcaacagcccctggacttggctgtggttctgtcag
gctcctttgtgactagtcctttccatcagagatatagtcacgacttttct
ggccattgtaatctctggatcctaattaattatcttatttattaatcagt
ggggtttttttattttttattttaaaaatttatgtgtatgtctgtgtcat
gtgtatttcggtgcccacagaggccaaaatcagtcatcggagaccctgga
gctgtagtttatacgtctttgtgaccctctgaagtgggtgccaagaggat
gaactcagctctttctaaagagaacttaagcacagaacatctctccagcc
cagtgtgtggactctggagccaggtatttcattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_43912500_43913431
seq2: B6Ng01-053I24.g_70_1004

seq1  GAATTCTACTCAACCATCTTGTATTCTGTGTTTTAGCTTCCCTTCAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTCAACCATCTTGTATTCTGTGTTTTAGCTTCCCTTCAATAA  50

seq1  ACACTGGTGGCCTCTAATGCTGGAGTCTTTGTTGGGTTTTAGGGAGCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGTGGCCTCTAATGCTGGAGTCTTTGTTGGGTTTTAGGGAGCAGG  100

seq1  TGAGTTCGTTGCTCACTGGCATCCCCTTTTGGAGACACCTAAGATACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCGTTGCTCACTGGCATCCCCTTTTGGAGACACCTAAGATACACA  150

seq1  CTGTCAGGTTTTCTTTATGCCTGTTCTGACTTCATTTTCTAAGTCATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGGTTTTCTTTATGCCTGTTCTGACTTCATTTTCTAAGTCATTCA  200

seq1  AGACAAAATATAAGCTAGCGGTCTCTTGGATGACATCTAGGCCCCAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAATATAAGCTAGCGGTCTCTTGGATGACATCTAGGCCCCAGAAT  250

seq1  GCTGTATAATTAGCCAAGGAATTGGTGGGTGTGACCTAGACAACATACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATAATTAGCCAAGGAATTGGTGGGTGTGACCTAGACAACATACAG  300

seq1  AGAAATAATCCCTAAAGATTCTTTGTTAACTCATTAGGAAACAGCAGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAATCCCTAAAGATTCTTTGTTAACTCATTAGGAAACAGCAGAGC  350

seq1  ATTGCAATGGGGAAGAGGAGGTGCCCTAGCAACCTTACCGTGGTCCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAATGGGGAAGAGGAGGTGCCCTAGCAACCTTACCGTGGTCCTGGA  400

seq1  GGTGGATGCAGGGGAAAGTTTTAATAAGCAAATGAAGAGGATGACAGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATGCAGGGGAAAGTTTTAATAAGCAAATGAAGAGGATGACAGGGG  450

seq1  ATGCTTTGGTCAATAATCCTTGGCAACAGAATCAATAGCAAGAGTGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTGGTCAATAATCCTTGGCAACAGAATCAATAGCAAGAGTGACAT  500

seq1  CAGTCTGAGATTAAGCAGACAGCGGTTGGACAGATGCCCTTGCAAGAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGAGATTAAGCAGACAGCGGTTGGACAGATGCCCTTGCAAGAGTA  550

seq1  TTTTTACATAAGGTTGCAACAGCCCCTGGACTTGGCTGTGGTTCTGTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACATAAGGTTGCAACAGCCCCTGGACTTGGCTGTGGTTCTGTCAG  600

seq1  GCTCCTTTGTGACTAGTCCTTTCCATCAGAGATATAGTCACGAC-TTTCT  649
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCTCCTTTGTGACTAGTCCTTTCCATCAGAGATATAGTCACGACTTTTCT  650

seq1  GGCCATTGTAATCTCTGGATCCTAATTAATTATCTTATTTATTAATCAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTGTAATCTCTGGATCCTAATTAATTATCTTATTTATTAATCAGT  700

seq1  GGGGTTTTTT--ATTTTTATTTTAAAAATTTATGTGTATGTCTGTGTCAT  747
      ||||||||||   |||||||||||||||||||||||||||||||||||||
seq2  GGGGTTTTTTTATTTTTTATTTTAAAAATTTATGTGTATGTCTGTGTCAT  750

seq1  GTGTATTTCGGTGCCCACAGAGGCCAAAATCAGTCATCGGAGACCCTGGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTTCGGTGCCCACAGAGGCCAAAATCAGTCATCGGAGACCCTGGA  800

seq1  GCTGTAG-TTATACGTCTTTGTGAACCCTCTGAAGTGGGTGCC-AGAGGA  845
      ||||||| ||||||||||||||| ||||||||||||||||||| ||||||
seq2  GCTGTAGTTTATACGTCTTTGTG-ACCCTCTGAAGTGGGTGCCAAGAGGA  849

seq1  TGAACTCAGCTC-TTCTAGAAGAGAACTTAAGCACAGAACCATCTCTCCA  894
      |||||||||||| ||||| |||||||||||||||||||| ||||||||||
seq2  TGAACTCAGCTCTTTCTA-AAGAGAACTTAAGCACAGAA-CATCTCTCCA  897

seq1  GCCCCAGTGTGTGGACTCTGGAGCCAGG-ATTTCATTAT  932
      | |||||||||||||||||||||||||| ||||||||||
seq2  G-CCCAGTGTGTGGACTCTGGAGCCAGGTATTTCATTAT  935