BAC Information

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BAC

Clone NameB6Ng01-054E14
Chromosome13 (Build37)
Map Location 57,102,955 - 57,103,615
singlet/doubletsinglet
Overlap genenone
Upstream geneH2afy, BC027057, Neurog1, Cxcl14, LOC100040926, AU042651, Il9, Fbxl21, Lect2, Tgfbi, Smad5, EG627415, Trpc7
Downstream geneLOC100040995, Spock1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054E14.bB6Ng01-054E14.g
ACCDH877070DH877071
length1,213661
definitionDH877070|Mus musculus domesticus DNA, BAC clone: B6Ng01-054E14, 5' end.DH877071|Mus musculus domesticus DNA, BAC clone: B6Ng01-054E14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcagtcactcatcttgtcatcggagatgaaccaagcactagc
cgggacccctgagacatggggagtgggcaggggtgccttgtctccaagag
actggtggttcaaagggaccgatgccaatggaagccctgtggtgggtcag
aaggtgagctctcctacttgtgaaagtggagctcaattcctctacagtca
gcttgtcactaactcctgggaaaacatttcctttcaaacaaacactattg
gtaagattcaaaaaccgggtaagaatttgctaatctaaaggcggagtgag
tgacttccagcaacgtcctgttggaaagaggttttacccagtccagcgtg
cgctcactgagctgccttgcactggagctatcaggagtgatggtggagtt
cttctccttgcccacagagacatcgtttcaccggtagattagtttatacg
tgataagtgttaaatggtcactgagcctaggaccaccaagtactcactgc
atgacagaggcagccataagccaggcaagtggctgctactctggtggacc
ttgcctttccctggggggaaggacagctgcccggagaggtcgctgcttca
cacagttggtaaagcaggagctccctgaggaggtgactttgaatggagag
tggagggaggggagggattcagggcagggcattggtggtatcacttgata
aaaaaaaatgtattggttagacaacaaacttggaattcttgtaatattaa
acagttatgtagcactcggaagcatggaaatgttcatggtttttatctat
cactcatttcctgaagacgctactgatttgatattaattgctgaatggca
gcctgcaaacatagttcacactaagcgttaaaattaagcactggtactgc
aatagctcagcaagagaagggatatagtcttctgagtgaaaggatggttc
ctttagctcttcgactttcagctagaaaggacgaatcataatgagaatac
tgttcaggaacctctcttgactccaagatccacagtgggtcacaacacct
gtcgtcagctcctggactgatccattgtccttcccagtactgcctcatta
gacaacatatctatgatttttaaagaaatcgtcaattattactggactaa
tgatagcccttcaattcctgatcttgagttggaaccacctcttatgagcc
atatactggatcg
gaattccagaacagctagagctacataagaagaccctgtctagaaacaaa
caaacaaaaaaagcaaaagaccaaaaaaaaaaaaaaaaaaagaataaaaa
ataataaaattaaaattaaataaaaaattaaaatggaaaaaaattaaaca
ataaaggcatttatgtgtagtcctgactgactggtctgcccctctcaggc
ccagcttctcggaggggaggtgacagctgtccatcaggtgccagtagaag
ccagggcaagctcacccccaagagccttcccggcagctgagagagctact
gttccgatgagtaacactgaactttctctgcacggtctttctttgttcca
gaggcaattgtcagctctgtgaccatctgttcctaagtctctcagaacaa
cctgatggttttggtcattcacattgaaaatgctcagaggatatactgtc
agcattactcagctctgaactgtgtgatctcaccgcctatgtggttgtcg
tgtggacgagaaaggtggtcatctactaggaagagcgtaagaaataaacc
cagcagtctaccctgagagccaccgggggagcattagggaacactcggtc
attagcgaggctggctcaaaccttggagaggaggcatctcagtgtgggtg
ggtggggggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_57102955_57103615
seq2: B6Ng01-054E14.g_68_728 (reverse)

seq1  AACCCCCCACCCACCCACACTGAGATGCCTCCTCTCCAAGGTTTGAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCCACCCACCCACACTGAGATGCCTCCTCTCCAAGGTTTGAGCCA  50

seq1  GCCTCGCTAATGACCGAGTGTTCCCTAATGCTCCCCCGGTGGCTCTCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGCTAATGACCGAGTGTTCCCTAATGCTCCCCCGGTGGCTCTCAGG  100

seq1  GTAGACTGCTGGGTTTATTTCTTACGCTCTTCCTAGTAGATGACCACCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACTGCTGGGTTTATTTCTTACGCTCTTCCTAGTAGATGACCACCTT  150

seq1  TCTCGTCCACACGACAACCACATAGGCGGTGAGATCACACAGTTCAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGTCCACACGACAACCACATAGGCGGTGAGATCACACAGTTCAGAGC  200

seq1  TGAGTAATGCTGACAGTATATCCTCTGAGCATTTTCAATGTGAATGACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAATGCTGACAGTATATCCTCTGAGCATTTTCAATGTGAATGACCA  250

seq1  AAACCATCAGGTTGTTCTGAGAGACTTAGGAACAGATGGTCACAGAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATCAGGTTGTTCTGAGAGACTTAGGAACAGATGGTCACAGAGCTG  300

seq1  ACAATTGCCTCTGGAACAAAGAAAGACCGTGCAGAGAAAGTTCAGTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGCCTCTGGAACAAAGAAAGACCGTGCAGAGAAAGTTCAGTGTTA  350

seq1  CTCATCGGAACAGTAGCTCTCTCAGCTGCCGGGAAGGCTCTTGGGGGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCGGAACAGTAGCTCTCTCAGCTGCCGGGAAGGCTCTTGGGGGTGA  400

seq1  GCTTGCCCTGGCTTCTACTGGCACCTGATGGACAGCTGTCACCTCCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCCCTGGCTTCTACTGGCACCTGATGGACAGCTGTCACCTCCCCTC  450

seq1  CGAGAAGCTGGGCCTGAGAGGGGCAGACCAGTCAGTCAGGACTACACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAAGCTGGGCCTGAGAGGGGCAGACCAGTCAGTCAGGACTACACATA  500

seq1  AATGCCTTTATTGTTTAATTTTTTTCCATTTTAATTTTTTATTTAATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTTTATTGTTTAATTTTTTTCCATTTTAATTTTTTATTTAATTTT  550

seq1  AATTTTATTATTTTTTATTCTTTTTTTTTTTTTTTTTTTGGTCTTTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATTATTTTTTATTCTTTTTTTTTTTTTTTTTTTGGTCTTTTGCT  600

seq1  TTTTTTGTTTGTTTGTTTCTAGACAGGGTCTTCTTATGTAGCTCTAGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTGTTTGTTTCTAGACAGGGTCTTCTTATGTAGCTCTAGCTG  650

seq1  TTCTGGAATTC  661
      |||||||||||
seq2  TTCTGGAATTC  661