BAC Information

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BAC

Clone NameB6Ng01-056F05
ChromosomeY (Build37)13 (Build37)
Map Location 574,045 - 574,10767,587,948 - 67,588,850
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056F05.bB6Ng01-056F05.g
ACCDH878518DH878519
length458903
definitionDH878518|Mus musculus domesticus DNA, BAC clone: B6Ng01-056F05, 5' end.DH878519|Mus musculus domesticus DNA, BAC clone: B6Ng01-056F05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(574,045 - 574,107)(67,587,948 - 67,588,850)
sequence
gaattctctgtttagctctgtacccattttttaactgggttatttggttt
gctggtgtccaacttcttgagttttttttttttttatgtaattgatgtca
gcccactgtgggatttagggttgctgaaaatcttttccattctggtggct
gccattatgacagtgtcctttgctttacagaaggtttctagttacatgag
atcccactcattgtttattttagtgccttagttactggtgttctgttcag
aacgttgttcctataccaatgcattcaaggctattccccactttctcttc
tcttagatttagagatttagagtatttgttggtttggtttttttacagat
atattttttatttatatgagtgcactgcagctgtcttcagacacacacta
gaaaagtgcatcagatcccattacagatggttgtgagccaccatgtggtt
gctgggaa
gaattcagtagctgggagagagtagctcagtggtgagaacgcgcagagct
ggaccctgccaggacatagtgttgtggcccgccagtaccggtactagagt
gggaacatggaccggcagggcaggagagatggcgattgactttttaaata
ttttccataacaatgccctggaaaatgagtgaaatgagatctatgtctct
catcgtgcaaacacacaaagtattcaagctagatgatattactttaaatt
gaaaatgcaaaaagggttatagagcaactactgtaaggttctctaaagga
ctagcacaatgaaatgcatatagttagaagaattcatgaaactggcttac
gggatatagtccaggtagtcttaacagtggtggtttcactatgaaaagtg
aatgaacctagcaactatcagtaccaggggcaacatgtctctgcagttcc
aatctggcgctgaggaattctggatacttgaagaattgctgggttttagt
ctctgatggaatccagaacactctggatttaagaaaggaggcaacaagtg
gatggagagccggggcaagcagtggggaagcaaatactcttcctgcaata
tccttctatgtggattatcgacaaagaagtgcggccctgctttagggtca
catcctttttagtataattaaggaaagcactttataagggttcccaggag
cttgtgtttcaactggttccaaggcaggccatggtgacaaccaagatgat
gtggaatccttgtaactaacaatacagacacagtgcacatacaatcaaac
cgcagaaagcattcaagtttttactgtaaaagaaaaaggccattcatttg
tacagaggtcatactgatgctgtgtcagtggtaactgtgtttgggggtgt
atg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_574045_574107
seq2: B6Ng01-056F05.b_441_501

seq1  CTAGAAAGAGAGCATCAGATCCCTATTATAGATGTTTGTGAGCCACCATG  50
      ||||||| || |||||||||||| |||| ||||| |||||||||||||||
seq2  CTAGAAA-AGTGCATCAGATCCC-ATTACAGATGGTTGTGAGCCACCATG  48

seq1  TGGTTGCTGGGAA  63
      |||||||||||||
seq2  TGGTTGCTGGGAA  61

seq1: chr13_67587948_67588850
seq2: B6Ng01-056F05.g_68_970

seq1  GAATTCAGTAGCTGGGAGAGAGTAGCTCAGTGGTGAGAACGCGCAGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGCTGGGAGAGAGTAGCTCAGTGGTGAGAACGCGCAGAGCT  50

seq1  GGACCCTGCCAGGACATAGTGTTGTGGCCCGCCAGTACCGGTACTAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCTGCCAGGACATAGTGTTGTGGCCCGCCAGTACCGGTACTAGAGT  100

seq1  GGGAACATGGACCGGCAGGGCAGGAGAGATGGCGATTGACTTTTTAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACATGGACCGGCAGGGCAGGAGAGATGGCGATTGACTTTTTAAATA  150

seq1  TTTTCCATAACAATGCCCTGGAAAATGAGTGAAATGAGATCTATGTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATAACAATGCCCTGGAAAATGAGTGAAATGAGATCTATGTCTCT  200

seq1  CATCGTGCAAACACACAAAGTATTCAAGCTAGATGATATTACTTTAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGTGCAAACACACAAAGTATTCAAGCTAGATGATATTACTTTAAATT  250

seq1  GAAAATGCAAAAAGGGTTATAGAGCAACTACTGTAAGGTTCTCTAAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGCAAAAAGGGTTATAGAGCAACTACTGTAAGGTTCTCTAAAGGA  300

seq1  CTAGCACAATGAAATGCATATAGTTAGAAGAATTCATGAAACTGGCTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACAATGAAATGCATATAGTTAGAAGAATTCATGAAACTGGCTTAC  350

seq1  GGGATATAGTCCAGGTAGTCTTAACAGTGGTGGTTTCACTATGAAAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATATAGTCCAGGTAGTCTTAACAGTGGTGGTTTCACTATGAAAAGTG  400

seq1  AATGAACCTAGCAACTATCAGTACCAGGGGCAACATGTCTCTGCAGTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACCTAGCAACTATCAGTACCAGGGGCAACATGTCTCTGCAGTTCC  450

seq1  AATCTGGCGCTGAGGAATTCTGGATACTTGAAGAATTGCTGGGTTTTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGCGCTGAGGAATTCTGGATACTTGAAGAATTGCTGGGTTTTAGT  500

seq1  CTCTGATGGAATCCAGAACACTCTGGATTTAAGAAAGGAGGCAACAAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATGGAATCCAGAACACTCTGGATTTAAGAAAGGAGGCAACAAGTG  550

seq1  GATGGAGAGCCGGGGCAAGCAGTGGGGAAGCAAATACTCTTCCTGCAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGAGCCGGGGCAAGCAGTGGGGAAGCAAATACTCTTCCTGCAATA  600

seq1  TCCTTCTATGTGGATTATCGACAAAGAAGTGCGGCCCTGCTTTAGGGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTATGTGGATTATCGACAAAGAAGTGCGGCCCTGCTTTAGGGTCA  650

seq1  CATCCTTTTTAGTATAATTAAGGAAAGCACTTTATAAGGGTTCCCAGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTTTAGTATAATTAAGGAAAGCACTTTATAAGGGTTCCCAGGAG  700

seq1  CTTGTGTTTCAACTGGTTCCAAGGCAGGCCATGGTGACAACCAAGATGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTTTCAACTGGTTCCAAGGCAGGCCATGGTGACAACCAAGATGAT  750

seq1  GTGGAATCCTTGTAACTAACAATACAGACACAGTGCACATACAATCAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATCCTTGTAACTAACAATACAGACACAGTGCACATACAATCAAAC  800

seq1  CGCAGAAAGCATTCAAGTTTTTACTGTAAAAGAAAAAGGCCATTCATTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGAAAGCATTCAAGTTTTTACTGTAAAAGAAAAAGGCCATTCATTTG  850

seq1  TACAGAGGTCATACTGATGCTGTGTCAGTGGTAACTGTGTTTGGGGGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGGTCATACTGATGCTGTGTCAGTGGTAACTGTGTTTGGGGGTGT  900

seq1  ATG  903
      |||
seq2  ATG  903