BAC Information

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BAC

Clone NameB6Ng01-056N03
Chromosome13 (Build37)
Map Location 91,876,684 - 92,008,904
singlet/doubletdoublet
Overlap geneAcot12, Zcchc9, Ckmt2
Upstream geneEG435376, Rps23, Atg10, LOC100042959, Ssbp2, LOC666889
Downstream geneRasgrf2, Rasgrf2, Msh3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056N03.bB6Ng01-056N03.g
ACCDH878864DH878865
length4291,079
definitionDH878864|Mus musculus domesticus DNA, BAC clone: B6Ng01-056N03, 5' end.DH878865|Mus musculus domesticus DNA, BAC clone: B6Ng01-056N03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,876,684 - 91,877,118)(92,007,819 - 92,008,904)
sequence
tagacttttaaagcacgtttctagttgcagaatccagagaacacttccta
gaccgaaaaccaaaccagaaaaaggcagttctaaaaagagaatagaaaaa
aatggttgaggtgacatctctgtaaacacaatacttgggaaactgaggca
ggaggattgctacaagtttgattatggcctctagagattatcaggccatc
cagggatacatgcactctaccttgaaaaacaaaataaaaccagtaacaaa
aacaggacaggggaggatgtagggtagaaggggaggcagaggagggggga
agaaataatataacatggaataagagactgatgaagaataggagaactaa
agagaaaagataacagactaatagctctcaacggtatagatgcaaaattc
tttaagaaaacagagtgagaccgaaatca
gaattctataaagtaaggagtggatgcttattgatcaggtagctgtggtc
atgccaatagatggaatttcttgggcttgaagaatatactcatcaccagg
gtcatacaacacgcagggattccctaacattaagggagacttgtgagagc
tgagttcaccagcaagatgaaaagactgtgaagcccaaaccagcctgtga
gtgctcagggaaccaatagagaaaaacaaaaaagcaaaacaacccattgg
tgtagaaggaagcatcgtttatgtgggctgagatgtcaggttgcagcctg
gtggggtagggaatagagacacgaaagtactaattggaagaacagcaaga
agccccccaaaatgacaatgctttgctaaaacagcttggcctaatttcct
gcataggtccaagattaaaaaccaacatttagaagcaatataaaaaattt
aagaccacaaaagctctagagccaatctgaatgttaggctgacaactgtg
tccttagcaacagtctccatggcaggccctgagtgatgtctgcatgaaat
ggatttgattttatacacttgtgaaagacataatgtttggttgatattta
gctctttcctgccaaccttttgttttgtttcatgatctgaatgaatctgc
gaccctgggggagaggcatgagcctctcttggtgctaatatggatctctg
cagcttctcctccacagcataggctgccaggccattttactaacagaaat
caaaagcaaaaggagatgaagttacccagatgtaacatgccaaggaagtc
ataattgtcgcatataatgtacatcgcctgctcttcccaccaagccccag
gattccctggtgtggcttccatgactttgagaatgaacatggcagtcttc
tcgcttgcctgtcctggttggagcaggtacagatgttctgatgggtttta
atgctctgcttggtgcagtgtcacttactggctcctatgaacagcaggtt
tccaatcaggtttgtcaagcttggaccctctgttctctttgcttgacaag
cttatatgaagaagcatcatgcaagatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_91876684_91877118
seq2: B6Ng01-056N03.b_48_482

seq1  GAATTCTAGACTTTTAAAGCACGTTTCTAGTTGCAGAATCCAGAGAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGACTTTTAAAGCACGTTTCTAGTTGCAGAATCCAGAGAACAC  50

seq1  TTCCTAGACCGAAAACCAAACCAGAAAAAGGCAGTTCTAAAAAGAGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGACCGAAAACCAAACCAGAAAAAGGCAGTTCTAAAAAGAGAATA  100

seq1  GAAAAAAATGGTTGAGGTGACATCTCTGTAAACACAATACTTGGGAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATGGTTGAGGTGACATCTCTGTAAACACAATACTTGGGAAACT  150

seq1  GAGGCAGGAGGATTGCTACAAGTTTGATTATGGCCTCTAGAGATTATCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGAGGATTGCTACAAGTTTGATTATGGCCTCTAGAGATTATCAG  200

seq1  GCCATCCAGGGATACATGCACTCTACCTTGAAAAACAAAATAAAACCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCAGGGATACATGCACTCTACCTTGAAAAACAAAATAAAACCAGT  250

seq1  AACAAAAACAGGACAGGGGAGGATGTAGGGTAGAAGGGGAGGCAGAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAACAGGACAGGGGAGGATGTAGGGTAGAAGGGGAGGCAGAGGAG  300

seq1  GGGGGAAGAAATAAGATAACAAGGAAGAAGAGACTGATGAAGAAAAGGAG  350
      |||||||||||||| |||||| |||| ||||||||||||||||| |||||
seq2  GGGGGAAGAAATAATATAACATGGAATAAGAGACTGATGAAGAATAGGAG  350

seq1  AACTAAAGAGAAAAGATAACAGACTAATAGCTCTCAACAGTATAGATGCA  400
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AACTAAAGAGAAAAGATAACAGACTAATAGCTCTCAACGGTATAGATGCA  400

seq1  AAATTCTTTAAGAAAACATAATGAGACAGAAATCA  435
      |||||||||||||||||| | |||||| |||||||
seq2  AAATTCTTTAAGAAAACAGAGTGAGACCGAAATCA  435

seq1: chr13_92007819_92008904
seq2: B6Ng01-056N03.g_66_1144 (reverse)

seq1  GGATCTTGCATGATGCCTACTTTCAATAAAGCTGTTCAGGCAAAGAGAAC  50
      |||||||||||||||| |   ||||   |||||  ||| |||||||||||
seq2  GGATCTTGCATGATGCTT--CTTCATATAAGCTTGTCAAGCAAAGAGAAC  48

seq1  AGAGGGTCCAAGGCTGGACAGACCTGATTGGGAAACCTGCTGTTCATAGG  100
      ||||||||||| ||| |||| |||||||| ||||||||||||||||||||
seq2  AGAGGGTCCAA-GCTTGACAAACCTGATT-GGAAACCTGCTGTTCATAGG  96

seq1  AGCCAGGTAAGTGACACTGCACCAGGCAGAGGCATTTAGAACCATCAGAA  150
      ||||| |||||||||||||||||| ||||| ||||| | | |||||||||
seq2  AGCCA-GTAAGTGACACTGCACCAAGCAGA-GCATTAAAACCCATCAGAA  144

seq1  CATCTGTACCTGCTCCAACCAGGACAGGCAAGCGAGAAGACTGCCATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTACCTGCTCCAACCAGGACAGGCAAGCGAGAAGACTGCCATGTT  194

seq1  CATTCTCAAGGTCATGGAAGCCCACACCAGGGAATCCTGGGGCTTGGTGG  250
      ||||||||| |||||||||| |||||||||||||||||||||||||||||
seq2  CATTCTCAAAGTCATGGAAG-CCACACCAGGGAATCCTGGGGCTTGGTGG  243

seq1  GAAGAGCAGGCGATGTACATTATATGCGACAATTATGACTTCCTTGGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCAGGCGATGTACATTATATGCGACAATTATGACTTCCTTGGCAT  293

seq1  GTTACATCTGGGTAACTTCATCTCCTTTTGCTTTTGATTTCTGTTAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATCTGGGTAACTTCATCTCCTTTTGCTTTTGATTTCTGTTAGTAA  343

seq1  AATGGCCTGGCAGCCTATGCTGTGGAGGAGAAGCTGCAGAGATCCATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCTGGCAGCCTATGCTGTGGAGGAGAAGCTGCAGAGATCCATATT  393

seq1  AGCACCAAGAGAGGCTCATGCCTCTCCCCCAGGGTCGCAGATTCATTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCAAGAGAGGCTCATGCCTCTCCCCCAGGGTCGCAGATTCATTCAG  443

seq1  ATCATGAAACAAAACAAAAGGTTGGCAGGAAAGAGCTAAATATCAACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAAACAAAACAAAAGGTTGGCAGGAAAGAGCTAAATATCAACCAA  493

seq1  ACATTATGTCTTTCACAAGTGTATAAAATCAAATCCATTTCATGCAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATGTCTTTCACAAGTGTATAAAATCAAATCCATTTCATGCAGACA  543

seq1  TCACTCAGGGCCTGCCATGGAGACTGTTGCTAAGGACACAGTTGTCAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCAGGGCCTGCCATGGAGACTGTTGCTAAGGACACAGTTGTCAGCC  593

seq1  TAACATTCAGATTGGCTCTAGAGCTTTTGTGGTCTTAAATTTTTTATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTCAGATTGGCTCTAGAGCTTTTGTGGTCTTAAATTTTTTATATT  643

seq1  GCTTCTAAATGTTGGTTTTTAATCTTGGACCTATGCAGGAAATTAGGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTAAATGTTGGTTTTTAATCTTGGACCTATGCAGGAAATTAGGCCA  693

seq1  AGCTGTTTTAGCAAAGCATTGTCATTTTGGGGGGCTTCTTGCTGTTCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTTTAGCAAAGCATTGTCATTTTGGGGGGCTTCTTGCTGTTCTTC  743

seq1  CAATTAGTACTTTCGTGTCTCTATTCCCTACCCCACCAGGCTGCAACCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGTACTTTCGTGTCTCTATTCCCTACCCCACCAGGCTGCAACCTG  793

seq1  ACATCTCAGCCCACATAAACGATGCTTCCTTCTACACCAATGGGTTGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTCAGCCCACATAAACGATGCTTCCTTCTACACCAATGGGTTGTTT  843

seq1  TGCTTTTTTGTTTTTCTCTATTGGTTCCCTGAGCACTCACAGGCTGGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTTGTTTTTCTCTATTGGTTCCCTGAGCACTCACAGGCTGGTTT  893

seq1  GGGCTTCACAGTCTTTTCATCTTGCTGGTGAACTCAGCTCTCACAAGTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCACAGTCTTTTCATCTTGCTGGTGAACTCAGCTCTCACAAGTCT  943

seq1  CCCTTAATGTTAGGGAATCCCTGCGTGTTGTATGACCCTGGTGATGAGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAATGTTAGGGAATCCCTGCGTGTTGTATGACCCTGGTGATGAGTA  993

seq1  TATTCTTCAAGCCCAAGAAATTCCATCTATTGGCATGACCACAGCTACCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTCAAGCCCAAGAAATTCCATCTATTGGCATGACCACAGCTACCT  1043

seq1  GATCAATAAGCATCCACTCCTTACTTTATAGAATTC  1086
      ||||||||||||||||||||||||||||||||||||
seq2  GATCAATAAGCATCCACTCCTTACTTTATAGAATTC  1079