BAC Information

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BAC

Clone NameB6Ng01-058A10
Chromosome13 (Build37)
Map Location 118,219,695 - 118,220,991
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041169, Parp8, LOC668288, LOC623312, Emb, EG623365
Downstream geneLOC382807, Hcn1, LOC100041695, LOC674926, Mrps30
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058A10.bB6Ng01-058A10.g
ACCDH879719DH879720
length1,0591,159
definitionDH879719|Mus musculus domesticus DNA, BAC clone: B6Ng01-058A10, 5' end.DH879720|Mus musculus domesticus DNA, BAC clone: B6Ng01-058A10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctactttacgtagttgctaagaacaagcaaagttgtcaacaccct
gaaaggtttgctgctgctattataaaactttgttcagattttctaaaaca
cagctgttataatgtcacttacttccagttgctccttgggataaaatgat
gctcctttgatctctgccttgctgattcatgtggtctatgaggtcggggt
ctgggtcgtaattgcctttcttaccttgttacagtcttgaactgaatgca
tgttgaataaaataaggaccaaaaggtcagcatgaaggagagaagcactg
aagcatccatagtcgccaaacctgggtgctattgtggatgccaggaagtg
cttgctgacaggagcctgatatggctatttcctgagaggatctgctggag
cctaaccaatacagaggcagatgctcgaagccatcaattggactgagcac
ggagtccccgatggaagagttggagaagggactgaaggagatgagatggg
gtgtgcagccccatggggaaagcaacaatgtcaaccatgcagagccccct
ggagctcccagggactggaccatcaaccaaagagtacacatggagggacc
catggctctggctgcatatgtggcagaggatggccttgttggacatcagc
gggaggagaggcccttggccatgagggtgttcgatgcccagtgtagggta
atgccagggaggaaaggcagaagtgagtaggcagatgggggaacaccctc
atagaggcaagggaagaagagaagggatagggagtttctgaaggggagac
ctggagaggggaaaacaattgaaatgcaaataaagaaaatatccaataaa
taagttaaagtaaaaaaaaaaagaacggtggaaataatggctacttctat
aagtggaaagagaaggagaagaggagagaagaagagatagagatagggag
acagaaggaagatacccagatgaacagaagatctatgtgtgatatataag
aatttagctttcgagtcattagatttgagattgagatgaatctttgatcc
atctgtcat

gaattctcaccctaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatacatacaaaaaatgtggttcatttacacaatg
gagtactactcagctattaaaaaggatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
agaactcaaataatatgtactcactgataagtggatattagcccagaaac
ttagtatagtgagatataatgtacaatttgcaaaacacatgaaactgaag
aagaacgaagaccaaagtgtggacactttgctcattcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggtccatctagagactgccatatccagggatccatcccataatta
gcctccaagcgatgacaacattgcatacactagcaagtctttgttgcaaa
gacggtgatatagctgtcccttgtgagactaggccggggtctagcaaaca
cagaagtggatgctcacagtcactattggatggatcacaggccccaatgg
aggagctagagaagtatcaagagctaagagatctgcaaccttatgggtgg
aacaacattatgactaccagtacccagagctctgactctagctgcattgt
atcaaagatggcctagtcgcctcactgaaaagaggcctttgaaagctacc
tatatgcccagtcaagggaaccaaggccaaaaatgggaatggtgcttagg
gatttgggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_118219695_118220991
seq2: B6Ng01-058A10.b_44_1102

seq1  GAATTCTACTTTACGTAGTTGCTAAGAACAAGCAAAGTTGTCAACACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTTTACGTAGTTGCTAAGAACAAGCAAAGTTGTCAACACCCT  50

seq1  GAAAGGTTTGCTGCTGCTATTATAAAACTTTGTTCAGATTTTCTAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTTTGCTGCTGCTATTATAAAACTTTGTTCAGATTTTCTAAAACA  100

seq1  CAGCTGTTATAATGTCACTTACTTCCAGTTGCTCCTTGGGATAAAATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTTATAATGTCACTTACTTCCAGTTGCTCCTTGGGATAAAATGAT  150

seq1  GCTCCTTTGATCTCTGCCTTGCTGATTCATGTGGTCTATGAGGTCGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTTGATCTCTGCCTTGCTGATTCATGTGGTCTATGAGGTCGGGGT  200

seq1  CTGGGTCGTAATTGCCTTTCTTACCTTGTTACAGTCTTGAACTGAATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCGTAATTGCCTTTCTTACCTTGTTACAGTCTTGAACTGAATGCA  250

seq1  TGTTGAATAAAATAAGGACCAAAAGGTCAGCATGAAGGAGAGAAGCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAATAAAATAAGGACCAAAAGGTCAGCATGAAGGAGAGAAGCACTG  300

seq1  AAGCATCCATAGTCGCCAAACCTGGGTGCTATTGTGGATGCCAGGAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCCATAGTCGCCAAACCTGGGTGCTATTGTGGATGCCAGGAAGTG  350

seq1  CTTGCTGACAGGAGCCTGATATGGCTATTTCCTGAGAGGATCTGCTGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGACAGGAGCCTGATATGGCTATTTCCTGAGAGGATCTGCTGGAG  400

seq1  CCTAACCAATACAGAGGCAGATGCTCGAAGCCATCAATTGGACTGAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACCAATACAGAGGCAGATGCTCGAAGCCATCAATTGGACTGAGCAC  450

seq1  GGAGTCCCCGATGGAAGAGTTGGAGAAGGGACTGAAGGAGATGAGATGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCCCGATGGAAGAGTTGGAGAAGGGACTGAAGGAGATGAGATGGG  500

seq1  GTGTGCAGCCCCATGGGGAAAGCAACAATGTCAACCATGCAGAGCCCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAGCCCCATGGGGAAAGCAACAATGTCAACCATGCAGAGCCCCCT  550

seq1  GGAGCTCCCAGGGACTGGACCATCAACCAAAGAGTACACATGGAGGGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCCCAGGGACTGGACCATCAACCAAAGAGTACACATGGAGGGACC  600

seq1  CATGGCTCTGGCTGCATATGTGGCAGAGGATGGCCTTGTTGGACATCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTCTGGCTGCATATGTGGCAGAGGATGGCCTTGTTGGACATCAGC  650

seq1  GGGAGGAGAGGCCCTTGGCCATGAGGGTGTTCGATGCCCAGTGTAGGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAGAGGCCCTTGGCCATGAGGGTGTTCGATGCCCAGTGTAGGGTA  700

seq1  ATGCCAGGGAGGAAAGGCAGAAGTGAGTAGGCAGATGGGGGAACACCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGGGAGGAAAGGCAGAAGTGAGTAGGCAGATGGGGGAACACCCTC  750

seq1  ATAGAGGCAAGGGAAGAAGAGAAGGGATAGGGAGTTTCTGAAGGGGAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGCAAGGGAAGAAGAGAAGGGATAGGGAGTTTCTGAAGGGGAGAC  800

seq1  CTGGAGAGGGGAAAACAATTGAAATGCAAATAAAGAAAATATCCAATAAA  850
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  CTGGAGAGGGGAAAACAATTGAAATGCAAATAAAGAAAATATCCAAT--A  848

seq1  AATAAGTTAAAGTAAAAAAAAAAAAGAACGGTGGAAAATAAATGGCTACT  900
      ||||||||||||| |||||||||||||||||||||||   ||||||||||
seq2  AATAAGTTAAAGT-AAAAAAAAAAAGAACGGTGGAAA--TAATGGCTACT  895

seq1  TCTAATAAGGTGGAAAAGGAAGAAAGGAAGGAAGGAAGGAAGGAAGAAAG  950
      ||| |||| |||||||  |||| |      ||||  ||||  ||||    
seq2  TCT-ATAA-GTGGAAAGAGAAGGA------GAAG--AGGAGAGAAG----  931

seq1  AAAGAGATAGAAGATAGGGGAGACAGAAGGGAAAGATTACACAGATAGAC  1000
       ||||||||| ||||| |||||||||||||  |||| ||| |||||  ||
seq2  -AAGAGATAG-AGATA-GGGAGACAGAAGG--AAGA-TACCCAGATGAAC  975

seq1  AGACAGATCTATGTGTGAATATA-AAGAATTTTAGGCTTTCAGAGTCATT  1049
      ||| ||||||||||||| ||||| ||||||||   |||||| ||||||||
seq2  AGA-AGATCTATGTGTG-ATATATAAGAATTT--AGCTTTC-GAGTCATT  1020

seq1  AAAAATTTGAGATTGAAGAATGAAATCATTTGATCCAATCTGGTCAATTG  1099
        | ||||||||||||   ||| |||| |||||||| |||| ||||    
seq2  --AGATTTGAGATTGA--GATG-AATC-TTTGATCC-ATCT-GTCAT---  1059

seq1  TAGTCATGAAAATTAAATTTAAATCATTTAAGAAGACAATGAAAAAAGAA  1149
                                                        
seq2  --------------------------------------------------  1059

seq1  AGTACTCTACATTTTTCTTTTGCCCATAAACTAATTACTCTTTTCATATA  1199
                                                        
seq2  --------------------------------------------------  1059

seq1  GTGAGATTTTTTTTCCAAATATATTTTTAAAATTACAACCCTTAGAATAA  1249
                                                        
seq2  --------------------------------------------------  1059

seq1  CCTCAGTCATAAGAATGATTTTGCTAATTTGTTTGTACATTCTGTCAT  1297
                                                      
seq2  ------------------------------------------------  1059


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