BAC Information

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BAC

Clone NameB6Ng01-058I08
Chromosome13 (Build37)
Map Location 21,155,584 - 21,318,537
singlet/doubletdoublet
Overlap geneOlfr1370, Olfr1369-ps1, Olfr42, Olfr1368, Trim27
Upstream geneElmo1, LOC100040226, LOC665381, LOC665386, Aoah
Downstream geneGpx5, LOC625752, Gpx6, Olfr1367, Zfp96, LOC665454, Zkscan3, Pgbd1, 4930470G03Rik, Zfp187, 4921504I05Rik, OTTMUSG00000000421, AK157302, LOC100040340, Zfp192, Olfr1366, Olfr1365, Olfr1364, Olfr1362, Olfr1363-ps1, Olfr11, Olfr1361, Olfr1360, Olfr1359, Hist1h2bl, Hist1h2ai, Hist1h3h, Hist1h2aj, Hist1h2bm, Hist1h4j, Hist1h4k, Hist1h2ak, Hist1h2bn, LOC100041150, Hist1h1b, Hist1h3i, Hist1h2an, Hist1h2bp, LOC665596, Rp23-480b19.10, LOC100041230, Hist1h4m, Hist1h2ao, LOC665622, LOC665634, Zfp184, Gm24, Prss16, Hist1h2ah, Hist1h2bk, Hist1h4i, Hist1h2ag, Hist1h2bj, LOC665690, V1rh17, V1rh2, V1ri8, LOC632534, V1ri1, V1ri9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058I08.bB6Ng01-058I08.g
ACCDH880075DH880076
length1,135962
definitionDH880075|Mus musculus domesticus DNA, BAC clone: B6Ng01-058I08, 5' end.DH880076|Mus musculus domesticus DNA, BAC clone: B6Ng01-058I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,155,584 - 21,156,731)(21,317,671 - 21,318,537)
sequence
gaattcaacagcaaataaccacacaaccataactttccctctgtgaaaga
tctaatagttagaaaacttgtagtccattttgctgcaatcacaaacgtgt
ttgaggttgcctaaacaataaaaatatatctctcacagttctggaagctg
ggtgttgatgatgcacatacccacagagatagtatcttttaggaactttc
tgagatggccctttgttgctgtgtcctttggaaggagatgtcactgcatt
gtcacatgatggaatgcagaaggtcacaggggccagacaaatgtcaatct
gtcatcataatcaccttcatttaattctagtgccacaagccctcataatg
agtgtgcctgggacattctatcttcactcagggctgcaggtatgaagatt
gggcacatgaactttaggggagacatatgttccaaagtacagtgagaatc
ctggaactaaagttaaacagttttaatgccacgagttgtttgttttggaa
atacaatttatttctcctattgattccttctgttcccagctgaacacttc
acactcagagctgttgtcagggtttggtcagtgtggttattgctcactga
ctcaagagactcagctatatgaaatctaagaataatcttaagactcttaa
ctcttcattctattcactttaatacttactgacaaaaataaacccttaat
gacatttacgaaccactgcttgtttattctttaggtaataagaatggtgc
attttttaaagtgtcaacagaaaatgtgacagcttccataaaatatgaaa
acttctcaatcatttatgagtggcaatggtttagaaacattcaaattact
gtgaatggcatgttctgcagtggaagtggtgaggtgaactcttacaggaa
cagaataaaaatcagaaatacacctgcttttgcctcctgggtgatgggat
taaaggcatgcaccacacctaacaccagttaccttttgattgaatttgtg
gcctacttcatggtaggtggcaggacacacgaagacccacatggacaatg
ttcagagaagaaatgactttgagtccaccttaatgaaatgacggaggaac
ccctcccctcagctcagatctatgaggaggtgaga
gaattccatgctaatctttcttccagggtgagaccctgtctaaaaaaatg
aaccaaaaataataaatagtttttaaaacatacaatttttctacctggaa
aattcttcagtgttgaaatgcctgagccttttctcatgtggctcatttgg
cagagtgcttgcctagtatacagaaggccctgggttcactctccagcact
agagagatcttcaggctgcctttaggaggcagaggaaggaggatcaggtg
ttgaaggtcacccttaattataaaagagagttggatgctaccatgagata
gtgtctcagaataaaaagctaatttcttttttttttctcattaaaaaaat
acaggcacttggcctgatgccaaggaccagcctcatcttggagacaggtt
ccgaggaagtggtgtttgagagctgggagacaaacgactagaagtcaaat
cataggtactagctgagagcctgtgttctatagatatagctcttggctct
gtcgtctgcttgagacagctcactctcaagacagctccctctctttttga
aacagctctctcttgctagaaaaaaaatgtttaaaagctctctggatagc
ttatggattttccaatcaaagtcagaaaggctgctataaagtaattcttg
gattttctagaaaaaaaaaatcctaaaagagccgtattagctccttaagc
aattcttggaattactgaccaagattagaaatcctgtaagaaaaaaattc
taaaagagacagttcaactcttgctaggaaaaaaatctaaaaagaacaac
tgctattgctctctgccggctaatctcatgcagaacaaaaagcccggtct
ttattttcatatctatttagtcatttattgaccccaagaatcagcattcc
atgaccttacccttgatttttaaaatttattattgtttgttgttagtgta
tgtgagcaccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_21155584_21156731
seq2: B6Ng01-058I08.b_43_1177

seq1  GAATTCAACAGCAAATAACCACACAACCATAACTTTCCCTCTGTGAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGCAAATAACCACACAACCATAACTTTCCCTCTGTGAAAGA  50

seq1  TCTAATAGTTAGAAAACTTGTAGTCCATTTTGCTGCAATCACAAACGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATAGTTAGAAAACTTGTAGTCCATTTTGCTGCAATCACAAACGTGT  100

seq1  TTGAGGTTGCCTAAACAATAAAAATATATCTCTCACAGTTCTGGAAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTTGCCTAAACAATAAAAATATATCTCTCACAGTTCTGGAAGCTG  150

seq1  GGTGTTGATGATGCACATACCCACAGAGATAGTATCTTTTAGGAACTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTGATGATGCACATACCCACAGAGATAGTATCTTTTAGGAACTTTC  200

seq1  TGAGATGGCCCTTTGTTGCTGTGTCCTTTGGAAGGAGATGTCACTGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGGCCCTTTGTTGCTGTGTCCTTTGGAAGGAGATGTCACTGCATT  250

seq1  GTCACATGATGGAATGCAGAAGGTCACAGGGGCCAGACAAATGTCAATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATGATGGAATGCAGAAGGTCACAGGGGCCAGACAAATGTCAATCT  300

seq1  GTCATCATAATCACCTTCATTTAATTCTAGTGCCACAAGCCCTCATAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCATAATCACCTTCATTTAATTCTAGTGCCACAAGCCCTCATAATG  350

seq1  AGTGTGCCTGGGACATTCTATCTTCACTCAGGGCTGCAGGTATGAAGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCCTGGGACATTCTATCTTCACTCAGGGCTGCAGGTATGAAGATT  400

seq1  GGGCACATGAACTTTAGGGGAGACATATGTTCCAAAGTACAGTGAGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACATGAACTTTAGGGGAGACATATGTTCCAAAGTACAGTGAGAATC  450

seq1  CTGGAACTAAAGTTAAACAGTTTTAATGCCACGAGTTGTTTGTTTTGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTAAAGTTAAACAGTTTTAATGCCACGAGTTGTTTGTTTTGGAA  500

seq1  ATACAATTTATTTCTCCTATTGATTCCTTCTGTTCCCAGCTGAACACTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATTTATTTCTCCTATTGATTCCTTCTGTTCCCAGCTGAACACTTC  550

seq1  ACACTCAGAGCTGTTGTCAGGGTTTGGTCAGTGTGGTTATTGCTCACTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGAGCTGTTGTCAGGGTTTGGTCAGTGTGGTTATTGCTCACTGA  600

seq1  CTCAAGAGACTCAGCTATATGAAATCTAAGAATAATCTTAAGACTCTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAGACTCAGCTATATGAAATCTAAGAATAATCTTAAGACTCTTAA  650

seq1  CTCTTCATTCTATTCACTTTAATACTTACTGACAAAAATAAACCCTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCATTCTATTCACTTTAATACTTACTGACAAAAATAAACCCTTAAT  700

seq1  GACATTTACGAACCACTGCTTGTTTATTCTTTAGGTAATAAGAATGGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTACGAACCACTGCTTGTTTATTCTTTAGGTAATAAGAATGGTGC  750

seq1  ATTTTTTAAAGTGTCAACAGAAAATGTGACAGCTTCCATAAAATATGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAAAGTGTCAACAGAAAATGTGACAGCTTCCATAAAATATGAAA  800

seq1  ACTTCTCAATCATTTATGAGTGGCAATGGTTTAGAAACATTCAAATTACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCAATCATTTATGAGTGGCAATGGTTTAGAAACATTCAAATTACT  850

seq1  GTGAATGGCATGTTCTGCAGTGGAAGTGGTGAGGTGAACTCTTACAGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGGCATGTTCTGCAGTGGAAGTGGTGAGGTGAACTCTTACAGGAA  900

seq1  CAGAATAAAAATCAGAAAATACACCTGCTTCTGCCTCCTGGGTGATGGGA  950
      ||||||||||||||| |||||||||||||| |||||||||||||||||||
seq2  CAGAATAAAAATCAG-AAATACACCTGCTTTTGCCTCCTGGGTGATGGGA  949

seq1  TTAAAGGCATGCACCACACCTAACACCAGTTACCTTTTGATTGAATTTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGCATGCACCACACCTAACACCAGTTACCTTTTGATTGAATTTGT  999

seq1  GGCCTACTTCATGGTAGGTGGCAAGACACACAGAGACCCACAATGGACAA  1050
      ||||||||||||||||||||||| |||||||  |||||||| ||||||||
seq2  GGCCTACTTCATGGTAGGTGGCAGGACACACGAAGACCCAC-ATGGACAA  1048

seq1  TGTCCAGAGAGTAATAGACTTTGGAGGTCTCACCCTAAATGAGATGACCG  1100
      ||| ||||||  ||  |||||| |||   ||  ||| ||||| |||| ||
seq2  TGTTCAGAGAAGAAATGACTTT-GAG---TCCACCTTAATGAAATGA-CG  1093

seq1  TATGACACCCCTTCCCTCCAGGCTCAAGATTCTATGAGGAGGTTGAGA  1148
       | || |||||| |||||   |||| ||| |||||||||||| |||||
seq2  GAGGA-ACCCCTCCCCTC--AGCTC-AGA-TCTATGAGGAGG-TGAGA  1135

seq1: chr13_21317671_21318537
seq2: B6Ng01-058I08.g_66_931 (reverse)

seq1  ATAGATATGAAAATAAAAGACCGGGCTTTTTGTTCTGCATGAGATTAGCC  50
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATAGATATGAAAAT-AAAGACCGGGCTTTTTGTTCTGCATGAGATTAGCC  49

seq1  GGCAGAGAGCAATAGCAGTTGTTCTTTTTAGATTTTTTTCCTAGCAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGAGCAATAGCAGTTGTTCTTTTTAGATTTTTTTCCTAGCAAGAG  99

seq1  TTGAACTGTCTCTTTTAGAATTTTTTTCTTACAGGATTTCTAATCTTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTGTCTCTTTTAGAATTTTTTTCTTACAGGATTTCTAATCTTGGT  149

seq1  CAGTAATTCCAAGAATTGCTTAAGGAGCTAATACGGCTCTTTTAGGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATTCCAAGAATTGCTTAAGGAGCTAATACGGCTCTTTTAGGATTT  199

seq1  TTTTTTTCTAGAAAATCCAAGAATTACTTTATAGCAGCCTTTCTGACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTAGAAAATCCAAGAATTACTTTATAGCAGCCTTTCTGACTTT  249

seq1  GATTGGAAAATCCATAAGCTATCCAGAGAGCTTTTAAACATTTTTTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGAAAATCCATAAGCTATCCAGAGAGCTTTTAAACATTTTTTTTCT  299

seq1  AGCAAGAGAGAGCTGTTTCAAAAAGAGAGGGAGCTGTCTTGAGAGTGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAGAGAGCTGTTTCAAAAAGAGAGGGAGCTGTCTTGAGAGTGAGC  349

seq1  TGTCTCAAGCAGACGACAGAGCCAAGAGCTATATCTATAGAACACAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAGCAGACGACAGAGCCAAGAGCTATATCTATAGAACACAGGCT  399

seq1  CTCAGCTAGTACCTATGATTTGACTTCTAGTCGTTTGTCTCCCAGCTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTAGTACCTATGATTTGACTTCTAGTCGTTTGTCTCCCAGCTCTC  449

seq1  AAACACCACTTCCTCGGAACCTGTCTCCAAGATGAGGCTGGTCCTTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCACTTCCTCGGAACCTGTCTCCAAGATGAGGCTGGTCCTTGGCA  499

seq1  TCAGGCCAAGTGCCTGTATTTTTTTAATGAGAAAAAAAAAAGAAATTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCAAGTGCCTGTATTTTTTTAATGAGAAAAAAAAAAGAAATTAGC  549

seq1  TTTTTATTCTGAGACACTATCTCATGGTAGCATCCAACTCTCTTTTATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTCTGAGACACTATCTCATGGTAGCATCCAACTCTCTTTTATAA  599

seq1  TTAAGGGTGACCTTCAACACCTGATCCTCCTTCCTCTGCCTCCTAAAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGTGACCTTCAACACCTGATCCTCCTTCCTCTGCCTCCTAAAGGC  649

seq1  AGCCTGAAGATCTCTCTAGTGCTGGAGAGTGAACCCAGGGCCTTCTGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGAAGATCTCTCTAGTGCTGGAGAGTGAACCCAGGGCCTTCTGTAT  699

seq1  ACTAGGCAAGCACTCTGCCAAATGAGCCACATGAGAAAAGGCTCAGGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCAAGCACTCTGCCAAATGAGCCACATGAGAAAAGGCTCAGGCAT  749

seq1  TTCAACACTGAAGAATTTTCCAGGTAGAAAAATTGTATGTTTTAAAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACACTGAAGAATTTTCCAGGTAGAAAAATTGTATGTTTTAAAAACT  799

seq1  ATTTATTATTTTTGGTTCATTTTTTTAGACAGGGTCTCACCCTGGAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTATTTTTGGTTCATTTTTTTAGACAGGGTCTCACCCTGGAAGAA  849

seq1  AGATTAGCATGGAATTC  867
      |||||||||||||||||
seq2  AGATTAGCATGGAATTC  866