BAC Information

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BAC

Clone NameB6Ng01-059E23
Chromosome13 (Build37)
Map Location 51,286,849 - 51,287,339
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040176, LOC100040118, Gm906, 2310081J21Rik, LOC676954, LOC667625, LOC667632, EG667637, Fbxw17, Gm806, EG639044, Gm904, LOC100040315, EG667693, LOC100040161, LOC100040190, EG667712, LOC676997, EG667717, Spin1, 4930519N16Rik
Downstream geneEG667728, LOC667733, Ppia-ps13_636.1, LOC625524, Edg3, Shc3, Cks2, Secisbp2, Sema4d, Gadd45g
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059E23.bB6Ng01-059E23.g
ACCDH880630DH880631
length1,245485
definitionDH880630|Mus musculus domesticus DNA, BAC clone: B6Ng01-059E23, 5' end.DH880631|Mus musculus domesticus DNA, BAC clone: B6Ng01-059E23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccaatttctgagtatatctatcccaattatacactctggaac
tggggaaatcaccacaggatgtgtccggggacctactggacctactgtga
gtcggatatcagtcaaaactccattaatcacctgccctccataagcccct
actttaactggagggccacaatgtttcttgggatcccctgggatcagtgt
caactcagaaccagtatccagcagaccccgaaaagtctgattatttcctt
ttccccagtgtacagttacccttgtaaaaggccgtaggtccctctgggga
agaattggagaaagggtaacagcaaaacctttgggtgtcttatcaagatc
cttcctcagcggaacctggccaccccttcattcaaggggttctggatctg
caaactgtctcaagtctggaaattgattcactggccgagattgctgttta
ccacgatctaatgtagcctttctttcatttggctgtttaccacgatctaa
tgtagcctttctttcatttgtttgagaatttttctgcttatacagatcaa
acaaatatgcagtaggcttcctatgtatttcattcctggaaacaccatga
ttggttagccagtaccaaaggtccaaccgagtcatgccattataaatttc
acctctcctgtgctgaccattactgggtatgttattataaacattctttt
gtctacgctgtccattataataactagaatcaccttgtctccagcgattc
aatgctgccacctggcccttgttacctcggaatccaactaaacccagtga
atttaattcatctaattgagcagaagcatctccaatgctaagatctggca
caaggaaaagggaaagaacaaaacccttcaaatgtgctggtgcccctctc
accaatttgcgtcttatagagctggtgaaagcatatcttctggactttcc
cattgtggacaattatgctttacacaatatatccactctagcattgcaat
ttccctaggtctaaatccctcatcacacttagccacgatatcaggcatct
tcagtcattcagtagcatcttttgataaacaacctcagccacatcaacac
ttgaccctttttaactatgcgagctcggataactagaattctactcaaag
aacccatgtcaaaccgccgtctgtagtcttccactatcccactaacatca
caatccagattcgctgagaatagccaccctagacctctcgaatgt
tttttagcttggagtgatgggccccctgctggtagagtgttctcttaaaa
accctcaaaactttatgacatgtgaatgcagtctcctcttagggaacaaa
ctcatgagatactagagccctatctaccaacccaagagatagaagactgg
ttatttgtttgacagtatgcgggtgcattttaaataagagagcaagaggg
gggctgaagggtgtggttcagttggtaaagtgttcagctagcttgcacaa
aaccctgagttccatccctagcatgttataaacagaggtgctggcacaca
tctgtaagaacagcacttggggactgaaggccggagggtcagaagttcaa
ggtcactctcagctgtatatcgagttgagtttgaggtcatcctgggccac
aataggttgtcaaagaaaaggggggggcgcaaaacaggaagcaggaatag
aagctgaggagggaagggaaaatggggggagagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_51286849_51287339
seq2: B6Ng01-059E23.g_68_558 (reverse)

seq1  TCCTCTCCCCCCATTTTCCCTTCCCTCCTCAGCTTCTATTCCTGCTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCCCCCCATTTTCCCTTCCCTCCTCAGCTTCTATTCCTGCTTCCT  50

seq1  GTTTTGCGCCCCCCCCTTTTCTTTGACAACCTATTGTGGCCCAGGATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCGCCCCCCCCTTTTCTTTGACAACCTATTGTGGCCCAGGATGAC  100

seq1  CTCAAACTCAACTCGATATACAGCTGAGAGTGACCTTGAACTTCTGACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACTCAACTCGATATACAGCTGAGAGTGACCTTGAACTTCTGACCC  150

seq1  TCCGGCCTTCAGTCCCCAAGTGCTGTTCTTACAGATGTGTGCCAGCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGCCTTCAGTCCCCAAGTGCTGTTCTTACAGATGTGTGCCAGCACCT  200

seq1  CTGTTTATAACATGCTAGGGATGGAACTCAGGGTTTTGTGCAAGCTAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTATAACATGCTAGGGATGGAACTCAGGGTTTTGTGCAAGCTAGCT  250

seq1  GAACACTTTACCAACTGAACCACACCCTTCAGCCCCCCTCTTGCTCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTTTACCAACTGAACCACACCCTTCAGCCCCCCTCTTGCTCTCTT  300

seq1  ATTTAAAATGCACCCGCATACTGTCAAACAAATAACCAGTCTTCTATCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAATGCACCCGCATACTGTCAAACAAATAACCAGTCTTCTATCTC  350

seq1  TTGGGTTGGTAGATAGGGCTCTAGTATCTCATGAGTTTGTTCCCTAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTGGTAGATAGGGCTCTAGTATCTCATGAGTTTGTTCCCTAAGAG  400

seq1  GAGACTGCATTCACATGTCATAAAGTTTTGAGGGTTTTTAAGAGAACACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGCATTCACATGTCATAAAGTTTTGAGGGTTTTTAAGAGAACACT  450

seq1  CTACCAGCAGGGGGCCCATCACTCCAAGCTAAAAAGAATTC  491
      |||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAGCAGGGGGCCCATCACTCCAAGCTAAAAAGAATTC  491