BAC Information

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BAC

Clone NameB6Ng01-060F15
Chromosome13 (Build37)
Map Location 8,342,923 - 8,478,207
singlet/doubletdoublet
Overlap geneAdarb2, EG666941
Upstream geneEG623516, LOC791083, LOC382722
Downstream geneWdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727, LOC100039719, Dip2c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060F15.bB6Ng01-060F15.g
ACCDH881348DH881349
length6651,061
definitionDH881348|Mus musculus domesticus DNA, BAC clone: B6Ng01-060F15, 5' end.DH881349|Mus musculus domesticus DNA, BAC clone: B6Ng01-060F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,477,543 - 8,478,207)(8,342,923 - 8,343,985)
sequence
gaattccagttaatttgtatgaaaatacaaaacagctggcatcttcaatg
acaagtgagagggcacaatcctggaataggaagatgtttgcaaaagaaag
aaaagtgaggggaatggaggagcattataatgttgctgaacaacagagca
ggttatgcgagacttagggaggaagagacagagggaaagaaggggagcag
ggaacctgatcaggagctttattggacaggtcaacatcatggtcgttatg
ccaaagtggaaggagaatcattgaagcgtttttaagacagggaatagtta
gatttgcattttagaaaatcactttctcaccagagttacggttatctagg
tgagaaatgatgcagagttgaattaaagggtctgctccagaagatgcaaa
agagctgcatgctattaagggaatatggattgatagcacttgttgacttg
aaatctgaaagtgggagaggggaaggagggtaaggggttggactgaataa
tatgagtgaagttttgtagccttcttagctgagtcagcagtccacatttg
taattcctgagcttagaaggtgcagggaagagccctgtaatgagtttgat
gacaactcgggagaatgtgtgaggcaccctctttgagctatggtacctga
ctgaatataaagaaa

gaattcaactttaaggtgaccatgctgccctagtgtcttttgacagtcag
ttcctgggtggtcctatggagattcccctcagagtggctgcatgcatgga
gaataccctacctttcccggatgcttctcaccatcctttctagattcctt
actacctatgaaacccaccatgtctatgcatcattcacttctagatgggc
tgctggtctatttacgaaggtattggcaaggctgtgtgtgtcagttacct
tacaggactcccacaaagacatgtaagatttgtttcccaggtggttctat
atcccaccaatttgacaataaagaattaccatcacattgggcaatggaga
attgctttaaagaggataaaaattgcagtcatgtaaatatctatgttatt
tttgctacatacacacataaccctccaaaaaacctgaatagaagagaaaa
ccacccagagggctttagttgaaaagctttattttcatttcattactgtc
acttgaaagactttaatgaaggcttacagctcttcaaaagaaaggcacca
tcagcatgaactataattattttatgctctttgcttatataatcataatt
ccctgagcctatggtcggtagttctggtgaacttacatgagactagtagc
cccctgagcagaaggctcatttgttgtctagaacagtgcactaccattgc
agaaattttatcattatgtccctgaacacaattcactaaggtggttatta
gcaccagggagatgtaatagagaaaaggcgcagagccggggaggtggtta
atgcaataaagtgcttgccactcaagaatgagggtctgagtttggatcat
cagcgcttctataaaaacagggtccgatggttgtggtttctgtgactctc
agtctctggggagggagagacagacagactctggggttgagtcattgttg
agcttctgattcagttggagactcatctcaagggatagattggagaactt
aggaccatcaaggttaacatctgacctacatattgtgtatattcaacacc
atacaatcgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_8477543_8478207
seq2: B6Ng01-060F15.b_46_710 (reverse)

seq1  TTTCTTTCTCTTCAGTCAGGAACCCTAGCTCAAAGAGGGTGCCTCACACA  50
      ||||||| | |||||||||| ||| |||||||||||||||||||||||||
seq2  TTTCTTTATATTCAGTCAGGTACCATAGCTCAAAGAGGGTGCCTCACACA  50

seq1  TTCTCCCCAGTTGTCATCAAACTCATTACAGGGCTCTTCCCTGCACCTTC  100
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCGAGTTGTCATCAAACTCATTACAGGGCTCTTCCCTGCACCTTC  100

seq1  TAAGCTCAGGAATTACAAATGTGGACTGCTGACTCAGCTAAGAAGGCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCAGGAATTACAAATGTGGACTGCTGACTCAGCTAAGAAGGCTAC  150

seq1  AAAACTTCACTCATATTATTCAGTCCAACCCCTTACCCTCCTTCCCCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTCACTCATATTATTCAGTCCAACCCCTTACCCTCCTTCCCCTCT  200

seq1  CCCACTTTCAGATTTCAAGTCAACAAGTGCTATCAATCCATATTCCCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTTCAGATTTCAAGTCAACAAGTGCTATCAATCCATATTCCCTTA  250

seq1  ATAGCATGCAGCTCTTTTGCATCTTCTGGAGCAGACCCTTTAATTCAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATGCAGCTCTTTTGCATCTTCTGGAGCAGACCCTTTAATTCAACT  300

seq1  CTGCATCATTTCTCACCTAGATAACCGTAACTCTGGTGAGAAAGTGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCATTTCTCACCTAGATAACCGTAACTCTGGTGAGAAAGTGATTT  350

seq1  TCTAAAATGCAAATCTAACTATTCCCTGTCTTAAAAACGCTTCAATGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATGCAAATCTAACTATTCCCTGTCTTAAAAACGCTTCAATGATT  400

seq1  CTCCTTCCACTTTGGCATAACGACCATGATGTTGACCTGTCCAATAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCACTTTGGCATAACGACCATGATGTTGACCTGTCCAATAAAGC  450

seq1  TCCTGATCAGGTTCCCTGCTCCCCTTCTTTCCCTCTGTCTCTTCCTCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATCAGGTTCCCTGCTCCCCTTCTTTCCCTCTGTCTCTTCCTCCCT  500

seq1  AAGTCTCGCATAACCTGCTCTGTTGTTCAGCAACATTATAATGCTCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCGCATAACCTGCTCTGTTGTTCAGCAACATTATAATGCTCCTCC  550

seq1  ATTCCCCTCACTTTTCTTTCTTTTGCAAACATCTTCCTATTCCAGGATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCTCACTTTTCTTTCTTTTGCAAACATCTTCCTATTCCAGGATTG  600

seq1  TGCCCTCTCACTTGTCATTGAAGATGCCAGCTGTTTTGTATTTTCATACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCTCACTTGTCATTGAAGATGCCAGCTGTTTTGTATTTTCATACA  650

seq1  AATTAACTGGAATTC  665
      |||||||||||||||
seq2  AATTAACTGGAATTC  665


seq1: chr13_8342923_8343985
seq2: B6Ng01-060F15.g_68_1128

seq1  GAATTCAACTTTAAGGTGACCATGCTGCCCTAGTGTCTTTTGACAGTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTTAAGGTGACCATGCTGCCCTAGTGTCTTTTGACAGTCAG  50

seq1  TTCCTGGGTGGTCCTATGGAGATTCCCCTCAGAGTGGCTGCATGCATGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGGTGGTCCTATGGAGATTCCCCTCAGAGTGGCTGCATGCATGGA  100

seq1  GAATACCCTACCTTTCCCGGATGCTTCTCACCATCCTTTCTAGATTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACCCTACCTTTCCCGGATGCTTCTCACCATCCTTTCTAGATTCCTT  150

seq1  ACTACCTATGAAACCCACCATGTCTATGCATCATTCACTTCTAGATGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCTATGAAACCCACCATGTCTATGCATCATTCACTTCTAGATGGGC  200

seq1  TGCTGGTCTATTTACGAAGGTATTGGCAAGGCTGTGTGTGTCAGTTACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTCTATTTACGAAGGTATTGGCAAGGCTGTGTGTGTCAGTTACCT  250

seq1  TACAGGACTCCCACAAAGACATGTAAGATTTGTTTCCCAGGTGGTTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGACTCCCACAAAGACATGTAAGATTTGTTTCCCAGGTGGTTCTAT  300

seq1  ATCCCACCAATTTGACAATAAAGAATTACCATCACATTGGGCAATGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACCAATTTGACAATAAAGAATTACCATCACATTGGGCAATGGAGA  350

seq1  ATTGCTTTAAAGAGGATAAAAATTGCAGTCATGTAAATATCTATGTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTAAAGAGGATAAAAATTGCAGTCATGTAAATATCTATGTTATT  400

seq1  TTTGCTACATACACACATAACCCTCCAAAAAACCTGAATAGAAGAGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTACATACACACATAACCCTCCAAAAAACCTGAATAGAAGAGAAAA  450

seq1  CCACCCAGAGGGCTTTAGTTGAAAAGCTTTATTTTCATTTCATTACTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCAGAGGGCTTTAGTTGAAAAGCTTTATTTTCATTTCATTACTGTC  500

seq1  ACTTGAAAGACTTTAATGAAGGCTTACAGCTCTTCAAAAGAAAGGCACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAAGACTTTAATGAAGGCTTACAGCTCTTCAAAAGAAAGGCACCA  550

seq1  TCAGCATGAACTATAATTATTTTATGCTCTTTGCTTATATAATCATAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATGAACTATAATTATTTTATGCTCTTTGCTTATATAATCATAATT  600

seq1  CCCTGAGCCTATGGTCGGTAGTTCTGGTGAACTTACATGAGACTAGTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGCCTATGGTCGGTAGTTCTGGTGAACTTACATGAGACTAGTAGC  650

seq1  CCCCTGAGCAGAAGGCTCATTTGTTGTCTAGAACAGTGCACTACCATTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAGCAGAAGGCTCATTTGTTGTCTAGAACAGTGCACTACCATTGC  700

seq1  AGAAATTTTATCATTATGTCCCTGAACACAATTCACTAAGGTGGTTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTTATCATTATGTCCCTGAACACAATTCACTAAGGTGGTTATTA  750

seq1  GCACCAGGGAGATGTAATAGAGAAAAGGCGCAGAGCCGGGGAGGTGGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAGGGAGATGTAATAGAGAAAAGGCGCAGAGCCGGGGAGGTGGTTA  800

seq1  ATGCAATAAAGTGCTTGCCACTCAAGAATGAGGGCCTGAGTTTGGATCAC  850
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  ATGCAATAAAGTGCTTGCCACTCAAGAATGAGGGTCTGAGTTTGGATCAT  850

seq1  CAGCGCTTCTATAAAAAACAGGGTCCGAT-GTTGTGG-TTCTGTGAC-CC  897
      |||||||||||| |||||||||||||||| ||||||| ||||||||| | 
seq2  CAGCGCTTCTAT-AAAAACAGGGTCCGATGGTTGTGGTTTCTGTGACTCT  899

seq1  CAG-CCCTGGGGAGGGAGAGACAGACAGACTCCTGGGTTGAGTCAATGTT  946
      ||| | ||||||||||||||||||||||||||  ||||||||||| ||||
seq2  CAGTCTCTGGGGAGGGAGAGACAGACAGACTCTGGGGTTGAGTCATTGTT  949

seq1  GAGCTTCTGATTCAGTTGGAGACCCATCTCAAAGGAATAAGATTGGGAAG  996
      ||||||||||||||||||||||| |||||||| |||   |||||||  ||
seq2  GAGCTTCTGATTCAGTTGGAGACTCATCTCAAGGGA--TAGATTGG--AG  995

seq1  AAACTTAGGGACCATCAAGGTTAACATCTGACCTACATA-TGTGTATATT  1045
       |||||| ||||||||||||||||||||||||||||||| ||||||||||
seq2  -AACTTA-GGACCATCAAGGTTAACATCTGACCTACATATTGTGTATATT  1043

seq1  CAACACACATACAA-CGTG  1063
      |||||| ||||||| ||||
seq2  CAACAC-CATACAATCGTG  1061


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