BAC Information

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BAC

Clone NameB6Ng01-064K16
Chromosome13 (Build37)
Map Location 75,394,022 - 75,559,352
singlet/doubletdoublet
Overlap genenone
Upstream geneAhrr, Pdcd6, Sdha, Ccdc127, AI595366, Zfp72, LOC666670, LOC634386, LOC100042547, LOC666683, LOC547136, BC012278, LOC434490, Arts1, Cast, LOC622204, EG544954, Pcsk1
Downstream geneLOC672443, LOC666764, LOC100042606, LOC100042986, Ell2, LOC666786, Glrx, Rhobtb3, LOC666553, LOC622313, Spata9, Rfesd, LOC100043008, Gpr150, Arsk, AK129128, Gm276, Mctp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064K16.bB6Ng01-064K16.g
ACCDH884381DH884382
length1,074949
definitionDH884381|Mus musculus domesticus DNA, BAC clone: B6Ng01-064K16, 5' end.DH884382|Mus musculus domesticus DNA, BAC clone: B6Ng01-064K16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,558,268 - 75,559,352)(75,394,022 - 75,394,796)
sequence
gaattctccaagtaggctaggctggctgcccagcaagttccagagatgtg
catgactctgcctccccagtactggcttagaaacatgtgccatcactcct
ggctcttttaaatgtgttttgggggttgaattcaaggttctcatatttat
gtaggaagtattctaccaagttagttatctctccagccctcacactaatg
agtttatcattcatccactttccttcataaaaataactgcatatcttaga
cacaatgcctgtcttgtgctctgtcccatgctcttcttatagagtgctct
gtatgtctatatgccatgagttctcagtagtagtgttaaataaaaagaac
aacaccaatagtactactgagctcttcaattacttggaactcaatagaat
gatattgttttaaagaagttgtttaataattccctttaactttagggctg
tagcatctgaacttctttcttacagggtcacaatttatagctattccctt
acacatgaattcaaggaactttaacttcctgatgtatttgttttgcagtc
attaaaaatgatcaaacatatggttgaatgaattttgtaacctagaaaat
tttaattcttactattattgtagtgatgggtataattacaattaattaaa
ataatctactctgcaacacacctacagggtaaagtctactgaagcaccaa
tagattgtcctaaagttcagcttgtccctcactctctgtttggagagaga
aacaagcagttcagttttgaagactctgtctctttaaacaaattgtgagc
tggtgagctacatggctcttttgattacatgttgaaaccacactaagtct
ctaaatccaagagaatattgcagtctggtcctttgtgctgaatgctcaaa
tgagtgcctcaggaaccaatccaaagcaaatcgctgttgatagtactgaa
ggatgaatcactgtcctctgagaggctctgcatcatcaacccaaatggag
atcactttgctcagatggcaggctgaattttgctgaacccagccagcctc
caagtcagaacgaagaagccctca
gaattcatgtgtttcctctttaagtgcttctaactgcttacctgtgttct
cctgtatttctttaagggggttgtttgtatccctttttaattattttaga
gctttattgtagaaagacagagagaaagagagaaggtagaagaaagcgag
aagccagccatggctacatggagagaagggggaaattgagggggaaaagg
aaagctagagacgagagtaagaaaggtgagagctcttatattttggttgt
gagcctagcctttaatgggtgggaatgaaaagtgaaacataaaaaaataa
ataaaaactaggcctttaggcccaggcttgagaatgtgacctttgtgact
caatgctccaaggtatgctaatcataaaacagatagggacattcctccac
ccacctgcttcctgggttcagggagtgtttgttcaaaaaggaccaccctg
accattcatagaacctgctatgcaaatgtgctattgttaggagctagtga
tcactggaaaattttgcctctaggtatggttaatatagccttacattatg
taagaaaaatttttattgtcaatactgtcaatattgtcttcaatataaga
aactaagactttgaatttttcagtgtatattgtttcttaaatggaaagtc
attcattagcaaatgcctctgaagggaagtttactacaaatcacaatgag
ctttaagttttgggagtattgttgctccacaaaagattcagatacaatat
ctttttaatatttagggtcttagtaatcctagaaaaattgtggtatagaa
aatttaagaaagaaaagatgatttacttacttcaaattcttttcaaaagc
ttctaggagagatgttaattggtttatactcacttaaactcactatttgc
tgatgttatcaggaagatgcaaaatcacttggtggtaaaacaaaaggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_75558268_75559352
seq2: B6Ng01-064K16.b_47_1120 (reverse)

seq1  TGAGGGCTCTTTCTGTTCTGAACTTGGGAGGCTGGCTGTGGCTCATGCAC  50
      ||||||||  ||| |||||| |||| |||||||||||| || ||| ||| 
seq2  TGAGGGCTTCTTC-GTTCTG-ACTT-GGAGGCTGGCTG-GGTTCA-GCA-  44

seq1  AAATTCAGCTTGCCATCTGAGCAAAGTGATCT-CATTTGGGTTGATGATG  99
      ||||||||| |||||||||||||||||||||| |||||||||||||||| 
seq2  AAATTCAGCCTGCCATCTGAGCAAAGTGATCTCCATTTGGGTTGATGAT-  93

seq1  GCAGAGCCTCTCAGAGGACAGTGATTCATTCTGTCAGTTACTATCAACAG  149
      ||||||||||||||||||||||||||||| || |||| ||||||||||||
seq2  GCAGAGCCTCTCAGAGGACAGTGATTCATCCT-TCAG-TACTATCAACAG  141

seq1  CGATTTGCTTCTGGATTGGTTCCTGGAGGCACTCATTTGAGCATTCAGCA  199
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  CGATTTGCTT-TGGATTGGTTCCT-GAGGCACTCATTTGAGCATTCAGCA  189

seq1  CAAAGGACCAGACTGCAATATTCTCTTGGATTTTAGAGACTTAGTGTGGT  249
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAAAGGACCAGACTGCAATATTCTCTTGGA-TTTAGAGACTTAGTGTGGT  238

seq1  TTCAACATGTAATCAAAAGAGCCATGTAGCTCACCAGCTCACAATTTGTT  299
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCAACATGTAATCAAAAGAGCCATGTAGCTCACCAGCTCACAATTTG-T  287

seq1  TTAAAGAGACAGAGTCTTCAAAACTGAACTGCTTGTTTCTCTCTCCAAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGACAGAGTCTTCAAAACTGAACTGCTTGTTTCTCTCTCCAAAC  337

seq1  AGAGAGTGAGGGACAAGCTGAACTTTAGGACAATCTATTGGTGCTTCAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTGAGGGACAAGCTGAACTTTAGGACAATCTATTGGTGCTTCAGT  387

seq1  AGACTTTACCCTGTAGGTGTGTTGCAGAGTAGATTATTTTAATTAATTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTACCCTGTAGGTGTGTTGCAGAGTAGATTATTTTAATTAATTGT  437

seq1  AATTATA-CCATCACTACAATAATAGTAAGAATTAAAATTTTCTAGGTTA  498
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATACCCATCACTACAATAATAGTAAGAATTAAAATTTTCTAGGTTA  487

seq1  CAAAATTCATTCAACCATATGTTTGATCATTTTTAATGACTGCAAAACAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTCATTCAACCATATGTTTGATCATTTTTAATGACTGCAAAACAA  537

seq1  ATACATCAGGAAGTTAAAGTTCCTTGAATTCATGTGTAAGGGAATAGCTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCAGGAAGTTAAAGTTCCTTGAATTCATGTGTAAGGGAATAGCTA  587

seq1  TAAATTGTGACCCTGTAAGAAAGAAGTTCAGATGCTACAGCCCTAAAGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGTGACCCTGTAAGAAAGAAGTTCAGATGCTACAGCCCTAAAGTT  637

seq1  AAAGGGAATTATTAAACAACTTCTTTAAAACAATATCATTCTATTGAGTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAATTATTAAACAACTTCTTTAAAACAATATCATTCTATTGAGTT  687

seq1  CCAAGTAATTGAAGAGCTCAGTAGTACTATTGGTGTTGTTCTTTTTATTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTAATTGAAGAGCTCAGTAGTACTATTGGTGTTGTTCTTTTTATTT  737

seq1  AACACTACTACTGAGAACTCATGGCATATAGACATACAGAGCACTCTATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTACTACTGAGAACTCATGGCATATAGACATACAGAGCACTCTATA  787

seq1  AGAAGAGCATGGGACAGAGCACAAGACAGGCATTGTGTCTAAGATATGCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGCATGGGACAGAGCACAAGACAGGCATTGTGTCTAAGATATGCA  837

seq1  GTTATTTTTATGAAGGAAAGTGGATGAATGATAAACTCATTAGTGTGAGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTTATGAAGGAAAGTGGATGAATGATAAACTCATTAGTGTGAGG  887

seq1  GCTGGAGAGATAACTAACTTGGTAGAATACTTCCTACATAAATATGAGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGAGATAACTAACTTGGTAGAATACTTCCTACATAAATATGAGAA  937

seq1  CCTTGAATTCAACCCCCAAAACACATTTAAAAGAGCCAGGAGTGATGGCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAATTCAACCCCCAAAACACATTTAAAAGAGCCAGGAGTGATGGCA  987

seq1  CATGTTTCTAAGCCAGTACTGGGGAGGCAGAGTCATGCACATCTCTGGAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTCTAAGCCAGTACTGGGGAGGCAGAGTCATGCACATCTCTGGAA  1037

seq1  CTTGCTGGGCAGCCAGCCTAGCCTACTTGGAGAATTC  1085
      |||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGGGCAGCCAGCCTAGCCTACTTGGAGAATTC  1074

seq1: chr13_75394022_75394796
seq2: B6Ng01-064K16.g_67_839

seq1  GAATTCATGTGTTTCCTCTTTAAGTGCTTCTAACTGCTTACCTGTGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTGTTTCCTCTTTAAGTGCTTCTAACTGCTTACCTGTGTTCT  50

seq1  CCTGTATTTCTTTAAGGGGGTTGTTTGTATCCCTTTTTAATTATTTTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATTTCTTTAAGGGGGTTGTTTGTATCCCTTTTTAATTATTTTAGA  100

seq1  GCTTTATTGTAGAAAGACAGAGAGAAAGAGAGAAGGTAGAAGAAAGCGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATTGTAGAAAGACAGAGAGAAAGAGAGAAGGTAGAAGAAAGCGAG  150

seq1  AAGCCAGCCATGGCTACATGGAGAGAAGGGGGAAATTGAGGGGGAAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGCCATGGCTACATGGAGAGAAGGGGGAAATTGAGGGGGAAAAGG  200

seq1  AAAGCTAGAGACGAGAGTAAGAAAGGTGAGAGCTCTTATATTTTGGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAGAGACGAGAGTAAGAAAGGTGAGAGCTCTTATATTTTGGTTGT  250

seq1  GAGCCTAGCCTTTAATGGGTGGGAATGAAAAGTGAAACATAAAAAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTAGCCTTTAATGGGTGGGAATGAAAAGTGAAACATAAAAAAATAA  300

seq1  ATAAAAACTAGGCCTTTAGGCCCAGGCTTGAGAATGTGACCTTTGTGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACTAGGCCTTTAGGCCCAGGCTTGAGAATGTGACCTTTGTGACT  350

seq1  CAATGCTCCAAGGTATGCTAATCATAAAACAGATAGGGACATTCCTCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTCCAAGGTATGCTAATCATAAAACAGATAGGGACATTCCTCCAC  400

seq1  CCACCTGCTTCCTGGGTTCAGGGAGTGTTTGTTCAAAAAGGACCACCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGCTTCCTGGGTTCAGGGAGTGTTTGTTCAAAAAGGACCACCCTG  450

seq1  ACCATTCATAGAACCTGCTATGCAAATGTGCTATTGTTAGGAGCTAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTCATAGAACCTGCTATGCAAATGTGCTATTGTTAGGAGCTAGTGA  500

seq1  TCACTGGAAAATTTTGCCTCTAGGTATGGTTAATATAGCCTTACATTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGAAAATTTTGCCTCTAGGTATGGTTAATATAGCCTTACATTATG  550

seq1  TAAGAAAAATTTTTATTGTCAATACTGTCAATATTGTCTTCAATATAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAAATTTTTATTGTCAATACTGTCAATATTGTCTTCAATATAAGA  600

seq1  AACTAAGACTTTGAATTTTTCAGTGTATATTGTTTCTTAAATGGAAAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGACTTTGAATTTTTCAGTGTATATTGTTTCTTAAATGGAAAGTC  650

seq1  ATTCATTAGCAAATGCCTCTGAAGGGAAGTTTACTACAAATCACAATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTAGCAAATGCCTCTGAAGGGAAGTTTACTACAAATCACAATGAG  700

seq1  CTTTAAAGTTTTGGGAGTAATTGTTGCTCCACAAAAGATTCAGATACAAT  750
      |||| ||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTTT-AAGTTTTGGGAGT-ATTGTTGCTCCACAAAAGATTCAGATACAAT  748

seq1  ATCTTTTTAATATTTAGGGTCTTAG  775
      |||||||||||||||||||||||||
seq2  ATCTTTTTAATATTTAGGGTCTTAG  773