BAC Information

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BAC

Clone NameB6Ng01-067B17
Chromosome13 (Build37)
Map Location 49,054,183 - 49,054,842
singlet/doubletsinglet
Overlap geneBC010304
Upstream gene4931429P17Rik, Id4, LOC667351, Zfp169, A830005F24Rik, AW456874, Barx1, Phf2, EG667415
Downstream geneC030044B11Rik, Wnk2, Ninj1, 1110007C09Rik, Susd3, Fgd3, Bicd2, Ippk, Cenpp, Tes3-ps, Ecm2, Aspn, Omd, Ogn, Nol8, Iars, LOC667488, LOC670357, EG638833, Gm272, EG667503, EG667507, LOC100040099
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067B17.bB6Ng01-067B17.g
ACCDH886097DH886098
length424660
definitionDH886097|Mus musculus domesticus DNA, BAC clone: B6Ng01-067B17, 5' end.DH886098|Mus musculus domesticus DNA, BAC clone: B6Ng01-067B17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agagaccattcattagaagctttttctactgggatgtctcccactgggtg
actgatgtagatactctctctctctctacctggcagcatccccccattca
tattttctctctctctctctctctctctctctctctctctctctctctct
ctctgtgtgtgtgtgtgtgtgagtgctccctctcactctctgtctctgta
tttctctcacttaacctctccccaccccccacccaccgtcccgtgaaaac
tctattcgatctatgtgtgtgggtgggggcgcgaggggacacagccatct
acttactggtgaaaaaaactcaacctctacaacctttggtatgtgcttgg
taaaattataactaaaccctttttttctcgcgggggggcgggtgcatctt
taagggggggggacggaggccggt
gaattctacttcctcctgtcacaaagcctgagggagggagcttcagtgct
gggtgtgtcgaactcagcaggtagtgtatgaataggccagggattgttct
agaagctagatgacagacaaggtcctcagagaagtcactttccatagggg
gaaaaataagtaaaagcaaagtaaactaagctatactgatacctggggag
ttttaaaatattgtatgttaactctggttccattccattcgttccattcg
gtttggttttttaagacagggtttcttcgcgtagccttggctgtcctaga
actcactctgtagtccaggttggcctcgaactcacagagatccacctgcc
tctgcctcctgagtgctgaggttaaagacgtgccaccactgcccagaggg
ttggttatttcttaaagtattcttactactatttacttatgtgtacattt
atgtctggatatgagtgaggacagagggtgtgggactgccctggagctga
agtcacaggcagctgtgggctgctacatgtgggtgctaggactaaactcg
ggtcctccacatgaacagcacatgctctgaagcactgtgccatgctccag
tcccaaactctggttgactgatatgtctaataggtttgggggtttatatt
tggttggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_49054183_49054842
seq2: B6Ng01-067B17.g_65_724

seq1  GAATTCTACTTCCTCCTGTCACAAAGCCTGAGGGAGGGAGCTTCAGTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTTCCTCCTGTCACAAAGCCTGAGGGAGGGAGCTTCAGTGCT  50

seq1  GGGTGTGTCGAACTCAGCAGGTAGTGTATGAATAGGCCAGGGATTGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGTCGAACTCAGCAGGTAGTGTATGAATAGGCCAGGGATTGTTCT  100

seq1  AGAAGCTAGATGACAGACAAGGTCCTCAGAGAAGTCACTTTCCATAGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTAGATGACAGACAAGGTCCTCAGAGAAGTCACTTTCCATAGGGG  150

seq1  GAAAAATAAGTAAAAGCAAAGTAAACTAAGCTATACTGATACCTGGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATAAGTAAAAGCAAAGTAAACTAAGCTATACTGATACCTGGGGAG  200

seq1  TTTTAAAATATTGTATGTTAACTCTGGTTCCATTCCATTCGTTCCATTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATATTGTATGTTAACTCTGGTTCCATTCCATTCGTTCCATTCG  250

seq1  GTTTGGTTTTTTAAGACAGGGTTTCTTCGCGTAGCCTTGGCTGTCCTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTTTTTAAGACAGGGTTTCTTCGCGTAGCCTTGGCTGTCCTAGA  300

seq1  ACTCACTCTGTAGTCCAGGTTGGCCTCGAACTCACAGAGATCCACCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCTGTAGTCCAGGTTGGCCTCGAACTCACAGAGATCCACCTGCC  350

seq1  TCTGCCTCCTGAGTGCTGAGGTTAAAGACGTGCCACCACTGCCCAGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCTGAGTGCTGAGGTTAAAGACGTGCCACCACTGCCCAGAGGG  400

seq1  TTGGTTATTTCTTAAAGTATTCTTACTACTATTTACTTATGTGTACATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTATTTCTTAAAGTATTCTTACTACTATTTACTTATGTGTACATTT  450

seq1  ATGTCTGGATATGAGTGAGGACAGAGGGTGTGGGACTGCCCTGGAGCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGGATATGAGTGAGGACAGAGGGTGTGGGACTGCCCTGGAGCTGA  500

seq1  AGTCACAGGCAGCTGTGGGCTGCTACATGTGGGTGCTAGGACTAAACTCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACAGGCAGCTGTGGGCTGCTACATGTGGGTGCTAGGACTAAACTCG  550

seq1  GGTCCTCCACATGAACAGCACATGCTCTGAAGCACTGTGCCATGCTCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTCCACATGAACAGCACATGCTCTGAAGCACTGTGCCATGCTCCAG  600

seq1  TCCCAAACTCTGGTTGACTGATATGTCTAATAGGTTTGGGGGTTTATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAACTCTGGTTGACTGATATGTCTAATAGGTTTGGGGGTTTATATT  650

seq1  TGGTTGGTTG  660
      ||||||||||
seq2  TGGTTGGTTG  660