BAC Information

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BAC

Clone NameB6Ng01-067F06
Chromosome13 (Build37)
Map Location 13,624,936 - 13,625,987
singlet/doubletsinglet
Overlap genenone
Upstream geneEro1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1
Downstream geneLyst, LOC100039831, Gng4, EG665000, EG665008, LOC630894, LOC100040205, B3galnt2, Tbce, Ggps1, LOC100040243, Arid4b, LOC100039916, Hecw1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067F06.bB6Ng01-067F06.g
ACCDH886250DH886251
length3491,050
definitionDH886250|Mus musculus domesticus DNA, BAC clone: B6Ng01-067F06, 5' end.DH886251|Mus musculus domesticus DNA, BAC clone: B6Ng01-067F06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agtcttcatttttacaacaaacactaacatatccagaagactctgttatt
attacccagctatgtagacattaaaatggctgagttattcaattatataa
aaattgcctttctgggtgaagaggtttgcagccccataggaagaacaata
tgaaccaaccagtaccccagagctcccagggactaaaccaccaaccaaag
agtacacatggtgccactcatggctccaatcacatatgtagcagaggatg
gcgtagatcaatgggaggagaggtcctccgtcctgtgacggctctatgcc
ccagtgtaggggacgccggagtggggaggcaggagtgggtgggctggtt
gaattcactctgagccagtacatgcaagccctcagcacaggccaaagggt
gtggtgtattcttggacatcctcatctattagcaccatcttaacaggatt
atcaaactagcttagttctggaacatcgatacctgtttgggacctacgtc
tgatctgactgatgcctctagcttttgctttccagatatagcaagcgcac
caatggactaggctgagatgtgctgacacaaactttaggccagagttttt
gtcaatgtgatgcagacccagacatatctgtgaagaatctcaactgaaga
acttctcccatcaggttggcctatgggtaagccagtagggcattttgtta
attgctaattggtaccggagggcctatcctaccagggataggctgtgcca
tctctggacagctgggcctgggctctacaggaaagtagctgaggagctgt
ggggaggaaggcagtaagcagtgttccttcatggcctctgcttcacttcc
tgcctccaggaccccgtcttgagctcctgtcctggggtctcatgatgatg
ggcagtaacctgtaaggtgaaataagcactttccagcccaggttgctttg
ggtaatgtttatcccagcaacagaaacctaactaggacgttccacctagg
cgtatctctgtgagcacaggaaaccaaacccttccccactcctctcctga
tgggaagaagctcttgaatttcttgtgactattttccagtgtgctgcatt
caggatcacttccttgttctagaaactggggcatgggagtgtgtagacat
gattctgtcaaaacacctagaagaggggcatgggcttgcatgaacatgca
tgcgtatatctttgcaatgcacacaaggcatacacacatgtgtccatgtg
agcacgcgtgatcccatccttggtggcttcagagttctttctgtgacttt
cacttcatgactccttactcagtccttagcttgtgccagcttgttcactt
tggcaggaattagtgctcttttgaaacagattcttatcggatggcaccag

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_13624936_13625987
seq2: B6Ng01-067F06.g_67_1116

seq1  GAATTCACTCTGAGCCAGTACATGCAAGCCCTCAGCACAGGCCAAAGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGAGCCAGTACATGCAAGCCCTCAGCACAGGCCAAAGGGT  50

seq1  GTGGTGTATTCTTGGACATCCTCATCTATTAGCACCATCTTAACAGGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTATTCTTGGACATCCTCATCTATTAGCACCATCTTAACAGGATT  100

seq1  ATCAAACTAGCTTAGTTCTGGAACATCGATACCTGTTTGGGACCTACGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACTAGCTTAGTTCTGGAACATCGATACCTGTTTGGGACCTACGTC  150

seq1  TGATCTGACTGATGCCTCTAGCTTTTGCTTTCCAGATATAGCAAGCGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGACTGATGCCTCTAGCTTTTGCTTTCCAGATATAGCAAGCGCAC  200

seq1  CAATGGACTAGGCTGAGATGTGCTGACACAAACTTTAGGCCAGAGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGACTAGGCTGAGATGTGCTGACACAAACTTTAGGCCAGAGTTTTT  250

seq1  GTCAATGTGATGCAGACCCAGACATATCTGTGAAGAATCTCAACTGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGTGATGCAGACCCAGACATATCTGTGAAGAATCTCAACTGAAGA  300

seq1  ACTTCTCCCATCAGGTTGGCCTATGGGTAAGCCAGTAGGGCATTTTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCCCATCAGGTTGGCCTATGGGTAAGCCAGTAGGGCATTTTGTTA  350

seq1  ATTGCTAATTGGTACCGGAGGGCCTATCCTACCAGGGATAGGCTGTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAATTGGTACCGGAGGGCCTATCCTACCAGGGATAGGCTGTGCCA  400

seq1  TCTCTGGACAGCTGGGCCTGGGCTCTACAGGAAAGTAGCTGAGGAGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGACAGCTGGGCCTGGGCTCTACAGGAAAGTAGCTGAGGAGCTGT  450

seq1  GGGGAGGAAGGCAGTAAGCAGTGTTCCTTCATGGCCTCTGCTTCACTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGAAGGCAGTAAGCAGTGTTCCTTCATGGCCTCTGCTTCACTTCC  500

seq1  TGCCTCCAGGACCCCGTCTTGAGCTCCTGTCCTGGGGTCTCATGATGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCAGGACCCCGTCTTGAGCTCCTGTCCTGGGGTCTCATGATGATG  550

seq1  GGCAGTAACCTGTAAGGTGAAATAAGCACTTTCCAGCCCAGGTTGCTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTAACCTGTAAGGTGAAATAAGCACTTTCCAGCCCAGGTTGCTTTG  600

seq1  GGTAATGTTTATCCCAGCAACAGAAACCTAACTAGGACGTTCCACCTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGTTTATCCCAGCAACAGAAACCTAACTAGGACGTTCCACCTAGG  650

seq1  CGTATCTCTGTGAGCACAGGAAACCAAACCCTTCCCCACTCCTCTCCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATCTCTGTGAGCACAGGAAACCAAACCCTTCCCCACTCCTCTCCTGA  700

seq1  TGGGAAGAAGCTCTTGAATTTCTTGTGACTATTTTCCAGTGTGCTGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGAAGCTCTTGAATTTCTTGTGACTATTTTCCAGTGTGCTGCATT  750

seq1  CAGGATCACTTCCTTGTTCTAGAAACT-GGGCATGGGAGTGTGTAGACAT  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CAGGATCACTTCCTTGTTCTAGAAACTGGGGCATGGGAGTGTGTAGACAT  800

seq1  GATTCTGTCAAAACACCTAGAAGAGGGGCATGGGCTTGCATGAACATGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGTCAAAACACCTAGAAGAGGGGCATGGGCTTGCATGAACATGCA  850

seq1  TGCGTATATCTTTGCAATGCACACAAGGCATACACACATGTGTCCATGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTATATCTTTGCAATGCACACAAGGCATACACACATGTGTCCATGTG  900

seq1  AGCACGCGTGATCCCATCCTTGGTGGCTGCAGAGTTCCTTTCTGTGACTT  949
      |||||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  AGCACGCGTGATCCCATCCTTGGTGGCTTCAGAGTT-CTTTCTGTGACTT  949

seq1  TCACTTCATGACTCCTTACTCAGTCCTTAGC-TGTGCCCAGCTTGTTCAC  998
      ||||||||||||||||||||||||||||||| |||| |||||||||||||
seq2  TCACTTCATGACTCCTTACTCAGTCCTTAGCTTGTG-CCAGCTTGTTCAC  998

seq1  TTTGGCAGGAATTAGGAGCTCCTTTTGAAACAGATCCTTATCAGATGGCA  1048
      |||||||||||||| | ||| |||||||||||||| |||||| |||||||
seq2  TTTGGCAGGAATTA-GTGCT-CTTTTGAAACAGATTCTTATCGGATGGCA  1046

seq1  CCAG  1052
      ||||
seq2  CCAG  1050