BAC Information

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BAC

Clone NameB6Ng01-069J20
Chromosome13 (Build37)
Map Location 67,693,110 - 67,694,214
singlet/doubletsinglet
Overlap geneZfp87
Upstream geneMzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp748
Downstream geneA530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272, LOC100042223
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069J20.bB6Ng01-069J20.g
ACCDH887871DH887872
length1,0801,060
definitionDH887871|Mus musculus domesticus DNA, BAC clone: B6Ng01-069J20, 5' end.DH887872|Mus musculus domesticus DNA, BAC clone: B6Ng01-069J20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttgtgtttagaaagtgatgatggagaacagaaggcctttcca
cacacttcacacttgtatggtttctctccagtatgcatttttgtatggct
aaaaagtcttgatggataatggaaggccttgtcacacacttcacacttgt
agggtttttttcctgtatgaataatcttgtgtttagaaagtagtgatgaa
taatggaaggccttgccacatacttcacacttgtagggtttttctcctgt
atgaattatcttgtgatgagaaagttttgatggaacatgaaatgcctggt
cacatatgtcacacttatagggtttttctcctgtatgaattatcttgtgt
ttagaaagtaatgatggataatggaaggccttgccacaaacttcacactt
gtagggtttttctcccgtatgaattttcttgtgtgcagatagtgatgatg
gaaatcggaaggccttcccacattctttacacttgtatggtttctctcct
gtgtgaattctcttgtgtttagatagtgatggtggaaaacagaacgcctt
tccacatacttcacacttgtatggcttttctcctgtatgaattctcttat
gcgtggaaagtcttgatggataatagaaggccttcccacatacttcacac
ttatagagtttttctcctgtatgaattgtcctgtgtttagaaagcagtga
tgaaacatggaaggccttgccacatacttcacatttgtagggcttctctc
ctctacaaattttcttatgtttagaaagtcttgaaggataaacgaaggca
ttgctacataattcactgttataataattatctcccatatgaattctctg
tgtttagaaagtgatgacagagaacgggaaagccttttcacatacttcac
acttgtatggttctctcctgtatgcatttttgcatgggtagaagtcttga
gggatatcgaagcttgcacatactcacacttgtaggattctcttctgtat
gattatcttgtgctagaaggatgaaatgcgaggcttcccacattttcact
tgattggttctctactgatgatttcttatg
gaattctttgtgcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttatttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttactgacagtgtcttttgctttgcagaagctttgcaacttta
tgaggtcccatctgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggtttttccctac
tttctcctctataagttttagtgtctctggttatatgtggagttccttga
tccacttagatttgaccttagtatgaggagataagaatggatcaattcgc
attcttctacatgataacctccagttatgcagcaccatttgttgaaaatg
ctgtcttttttctactggatggttttagctcccttgtcaaagataaaagt
ggccataggtttgtgggttcatctcagggtcttcaattctgttccattgg
tctacttgtctgtcgctataccagtatcatgcagtttttatcacaattgc
tctgtagtacagctttaggtcaggaatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttttattccagatga
atttgcagattgccctttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
gactatattgatcctgcaatccatgagcatggggagatcttttcatcttc
tgagatcttctttaatttctttcttcagagacttggagttcttatcaatc
agaatctttcactttcttagttaagagtcacgcaagaatattttatttat
ttgtgactaatgaagaaggtggttgtttccctaattctttttcattattc
tgaagtttataaaactcttgcactaaccgtctcgtctgggccttttttgc
tgggagacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67693110_67694214
seq2: B6Ng01-069J20.b_50_1129

seq1  GAATTCTCTTGTGTTTAGAAAGTGATGATGGAGAACAGAAGGCCTTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGTGTTTAGAAAGTGATGATGGAGAACAGAAGGCCTTTCCA  50

seq1  CACACTTCACACTTGTATGGTTTCTCTCCAGTATGCATTTTTGTATGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTCACACTTGTATGGTTTCTCTCCAGTATGCATTTTTGTATGGCT  100

seq1  AAAAAGTCTTGATGGATAATGGAAGGCCTTGTCACACACTTCACACTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTCTTGATGGATAATGGAAGGCCTTGTCACACACTTCACACTTGT  150

seq1  AGGGTTTTTTTCCTGTATGAATAATCTTGTGTTTAGAAAGTAGTGATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTTTTTCCTGTATGAATAATCTTGTGTTTAGAAAGTAGTGATGAA  200

seq1  TAATGGAAGGCCTTGCCACATACTTCACACTTGTAGGGTTTTTCTCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGAAGGCCTTGCCACATACTTCACACTTGTAGGGTTTTTCTCCTGT  250

seq1  ATGAATTATCTTGTGATGAGAAAGTTTTGATGGAACATGAAATGCCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTATCTTGTGATGAGAAAGTTTTGATGGAACATGAAATGCCTGGT  300

seq1  CACATATGTCACACTTATAGGGTTTTTCTCCTGTATGAATTATCTTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATGTCACACTTATAGGGTTTTTCTCCTGTATGAATTATCTTGTGT  350

seq1  TTAGAAAGTAATGATGGATAATGGAAGGCCTTGCCACAAACTTCACACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAGTAATGATGGATAATGGAAGGCCTTGCCACAAACTTCACACTT  400

seq1  GTAGGGTTTTTCTCCCGTATGAATTTTCTTGTGTGCAGATAGTGATGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGTTTTTCTCCCGTATGAATTTTCTTGTGTGCAGATAGTGATGATG  450

seq1  GAAATCGGAAGGCCTTCCCACATTCTTTACACTTGTATGGTTTCTCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCGGAAGGCCTTCCCACATTCTTTACACTTGTATGGTTTCTCTCCT  500

seq1  GTGTGAATTCTCTTGTGTTTAGATAGTGATGGTGGAAAACAGAACGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAATTCTCTTGTGTTTAGATAGTGATGGTGGAAAACAGAACGCCTT  550

seq1  TCCACATACTTCACACTTGTATGGCTTTTCTCCTGTATGAATTCTCTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATACTTCACACTTGTATGGCTTTTCTCCTGTATGAATTCTCTTAT  600

seq1  GCGTGGAAAGTCTTGATGGATAATAGAAGGCCTTCCCACATACTTCACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGAAAGTCTTGATGGATAATAGAAGGCCTTCCCACATACTTCACAC  650

seq1  TTATAGAGTTTTTCTCCTGTATGAATTGTCCTGTGTTTAGAAAGCAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGAGTTTTTCTCCTGTATGAATTGTCCTGTGTTTAGAAAGCAGTGA  700

seq1  TGAAACATGGAAGGCCTTGCCACATACTTCACATTTGTAGGGCTTCTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACATGGAAGGCCTTGCCACATACTTCACATTTGTAGGGCTTCTCTC  750

seq1  CTCTACAAATTTTCTTATGTTTAGAAAGTCTTGAAGGATAAACGAAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAAATTTTCTTATGTTTAGAAAGTCTTGAAGGATAAACGAAGGCA  800

seq1  TTGCTACATAATTCACTGTTATAATAATTATCTCCCATATGAATTCTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTGCTACATAATTCACTGTTATAATAATTATCTCCCATATGAATTCT-CT  849

seq1  GTGTTTAGAAAGTGATGACAGAGAAC-GGAAAGCCTTTTCACATACTTCA  899
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTGTTTAGAAAGTGATGACAGAGAACGGGAAAGCCTTTTCACATACTTCA  899

seq1  CACTTGTATGGTTTCTCTCCTGTATGCATTTTTGCATGGGTAGAAAGTCT  949
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  CACTTGTATGG-TTCTCTCCTGTATGCATTTTTGCATGGGTAG-AAGTCT  947

seq1  TGAGGGATAATCGAAAGCCTTGCCACATACTTCACACTTGTAAGGATTCT  999
      |||||||| ||||||   |||| ||||||| |||||||||| ||||||||
seq2  TGAGGGAT-ATCGAA--GCTTG-CACATAC-TCACACTTGT-AGGATTCT  991

seq1  CTTCTGTATGAATTATCTTGTGCTTAGAAAGGAGTGATAAAATGCGGAAG  1049
      |||||||||| |||||||||||| |||||      ||| |||||||  ||
seq2  CTTCTGTATG-ATTATCTTGTGC-TAGAA-----GGATGAAATGCG--AG  1032

seq1  GCCTTCCCACATATTTCACACTTGTATGGTTTCTCTACTGAATGGATTTT  1099
      | |||||||||| ||   |||||| || | |||||||||| |||   |||
seq2  G-CTTCCCACATTTT---CACTTG-ATTGGTTCTCTACTG-ATG--ATTT  1074

seq1  CTTATG  1105
      ||||||
seq2  CTTATG  1080