BAC Information

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BAC

Clone NameB6Ng01-070M23
Chromosome13 (Build37)
Map Location 66,137,351 - 66,219,615
singlet/doubletdoublet
Overlap geneLOC100042434
Upstream gene4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746
Downstream geneLOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070M23.bB6Ng01-070M23.g
ACCDH888690DH888691
length1,0691,154
definitionDH888690|Mus musculus domesticus DNA, BAC clone: B6Ng01-070M23, 5' end.DH888691|Mus musculus domesticus DNA, BAC clone: B6Ng01-070M23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,218,600 - 66,219,615)(66,137,351 - 66,138,417)
sequence
gaattcaatgactctgaagcctcaggtagtattggtgtcatgagcatatg
tcatcctggaaaacagaatataacctatagattttgtcaaatttcaaaat
tgaagatgtgaataaagaattgcacagaagcatatgcttattgtacaaaa
acatgataggtggctgatgtggtgtctatacctactaacaggacagaaag
ggtttcacagagaaattttatctcaaacaacaaaatccaaaataataaaa
ttaaaaacataaaaccaccaggcttgcaaaatagcttagcattgaatagc
aaatgtgtctactgtatcttatgtgatttagggacagagaccaaatggtg
aatgtatgggtgcatgagaagaaagaccctcactccccttcaaatgtcac
ccaaggaaacaaaaatgatagaaagaacccatagttctgcactgaagttc
ctacaaagaattatacattaactgcagttctgtattcaattgcagaaaca
tgaggtacaccagtttaaaccataacattaataaaattttgctaaaaatt
tgaattatgaaaattatgaatcagtttaaaccacaacgctgtagacacaa
agaacatatttgtcctgtcaaagagaaatgcagaggcaaagctggatcag
agactgagggaatggccatgaaaacttgcccaaatagagacatatcccat
tttatttgtaacaactagaaactgcaaacaatccagatgtccctcacccg
aaatacgtatacagaaaatgtggtttatttacaaaatggaatactaataa
gctattaaaaacaaggacatcatgaattttccagaccaatggatacaggt
agaaactatcatcctgagtgaggtaacccagaaacaaaatgacatgaata
tatgtactcacttacaagtgaacattaaccataaagtacaggatatccac
actatattccatagaatcaaagaagctaaacagagaaaagccctaatgag
cattgttgaatctcattcaaaggggataaaacagtcagaggaggcagatg
gaagaaagaagagagactg
gaattccattcattttcctgactctctgaccatctcttgtctctcacaac
acctgttcctggccactcgcccttccccttacttatccactctcccatcc
agttctctctctttcttccatctgcctcctctgactgttttattcccctt
ttgaatgagattcaacaatgcttattagggcttttcttcttgtttagctt
ctttggttctatggaatatactgtggatatcctgtactttatggttaatg
ttcacttgtaagtgagtacatatattcatgtcattttgtttctgggttac
ctcactcaggatgatagtttctacctgtatccattggcctggaaaattca
tgatgtccttgcttttaatagcttattagtattccattttgtaaataaac
cacattttctgtatatgtatttcgggtgagggacatctggattgtttgca
gtttctagttgttacaaataaaataggatatgtctctatttgggcaagtt
ttcattggccattccctcagtctctgatccagctttgcctctgcatttct
ctttgacaggacaaatatgttctttgtgtctacagcgttgtggtttaaac
tgattcataattttcataattcaaaaatttagcaaaattttattaatgtt
acagtttaaactggtgtacctcatgtttctgcaattgaatacagaactgc
agttaatgtataattctttgtaggaacttcagtgcagaactatgggttct
ttcaatcatttttgtttccttgggtgacatttgcaggggagtgagggtct
ttcttctcatgcacccatactttcaccatttgttctctgtccctaaagca
cataagatacagtagacacatttgctattcaatgctaaactattttgcaa
tcctggtggtttatattttaaatttattattttggatttattgttgaggt
aaatttctctgtgaaaccctttttgtcctgttagtagtatagacacacat
cagacacctatcatgtttttgtacaataagcatatgcttctttgcaattc
tttattccatctcaatttgaaatttgaaaaaattatataggtatatttct
gtttcaagatagacacatatgcctcattaacaccaatacactgaagcttc
agag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66218600_66219615
seq2: B6Ng01-070M23.b_103_1114 (reverse)

seq1  CAGTTCTCTC-TCTTTCTTCCATCTGCCTCCTCTGACTGTTTTATTCCCC  49
      ||| |||||| ||||||||||||||||||||||||||||||||||  |||
seq2  CAG-TCTCTCTTCTTTCTTCCATCTGCCTCCTCTGACTGTTTTAT--CCC  47

seq1  TTTTGAATGAGATTCAACAATGCTCATTAGGGCTTTTCTTCTTGTTTAGC  99
       ||||||||||||||||||||||||||||||||||||||   ||||||||
seq2  CTTTGAATGAGATTCAACAATGCTCATTAGGGCTTTTCT--CTGTTTAGC  95

seq1  TTCTTTGGTTCTATGGAATATAGTGTGGATATCCTGTACTTTATGGTTAA  149
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGATTCTATGGAATATAGTGTGGATATCCTGTACTTTATGGTTAA  145

seq1  TGTTCACTTGTAAGTGAGTACATATATTCATGTCATTTTGTTTCTGGGTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACTTGTAAGTGAGTACATATATTCATGTCATTTTGTTTCTGGGTT  195

seq1  ACCTCATTCAGGATGATAGTTTCTACCTGTATCCATTGGCCTGGAAAATT  249
      |||||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  ACCTCACTCAGGATGATAGTTTCTACCTGTATCCATTGGTCTGGAAAATT  245

seq1  CATGATGTCCTTGTTTTTAATAGCTTATTAGTATTCCATTTTGTAAATAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGTCCTTGTTTTTAATAGCTTATTAGTATTCCATTTTGTAAATAA  295

seq1  ACCACATTTTCTGTATACGTATTTCGGGTGAGGGACATCTGGATTGTTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATTTTCTGTATACGTATTTCGGGTGAGGGACATCTGGATTGTTTG  345

seq1  CAGTTTCTAGTTGTTACAAATAAAATAGGATATGTCTCTATTTGGGCAAG  399
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAGTTTCTAGTTGTTACAAATAAAATGGGATATGTCTCTATTTGGGCAAG  395

seq1  TTTTCATTGGCCATTCCCTCAGTCTCTGATCCAGCTTTGCCTCTGCATTT  449
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCA-TGGCCATTCCCTCAGTCTCTGATCCAGCTTTGCCTCTGCATTT  444

seq1  CTCTTTGACAGGACAAATATGTTCTTTGTGTCTACAGCGTTGTGGTTTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGACAGGACAAATATGTTCTTTGTGTCTACAGCGTTGTGGTTTAA  494

seq1  ACTGATTCATAATTTTCATAATTCAAAATTTTAGCAAAATTTTATTAATG  549
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACTGATTCATAATTTTCATAATTCAAATTTTTAGCAAAATTTTATTAATG  544

seq1  TTACAGTTTAAACTGGTGTACCTCATGTTTCTGCAATTGAATACAGAACT  599
      |||  |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTTTAAACTGGTGTACCTCATGTTTCTGCAATTGAATACAGAACT  594

seq1  GCAGTTAATGTATAATTCTTTGTAGGAACTTCAGTGCAGAACTATGGGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTAATGTATAATTCTTTGTAGGAACTTCAGTGCAGAACTATGGGTT  644

seq1  CTTTCTATCATTTTTGTTTCCTTGGGTGACATTTGCAGGGGAGTGAGGGT  699
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTTTCTATCATTTTTGTTTCCTTGGGTGACATTTGAAGGGGAGTGAGGGT  694

seq1  CTTTCTTCTCATGCACCCATACATTCACCATTTGTTCTCTGTCCCTAAAG  749
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  CTTTCTTCTCATGCACCCATACATTCACCATTTGGTCTCTGTCCCTAAAT  744

seq1  CACATAAGATACAGTAGACACATTTGCTATTCAATGCTAAACTATTTTGC  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CACATAAGATACAGTAGACACATTTGCTATTCAATGCTAAGCTATTTTGC  794

seq1  AAGCCTGGTGGTTTTATATTTTTAAATTTATTATTTTGGATTTTGTTGTT  849
      ||||||||||||||||| ||||||| ||||||||||||||||||||||||
seq2  AAGCCTGGTGGTTTTATGTTTTTAATTTTATTATTTTGGATTTTGTTGTT  844

seq1  TGAGGTAAAATTTCTCTGTGAAACCCTTTTTGTCCTGTTAGTAGGTATAG  899
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGAGATAAAATTTCTCTGTGAAACCCTTTCTGTCCTGTTAGTAGGTATAG  894

seq1  ACACCACATCAGACACCTATCATGTTTTTGTACAATAAGCATATGCTTCT  949
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACACCACATCAGCCACCTATCATGTTTTTGTACAATAAGCATATGCTTCT  944

seq1  GTGCAATTCTTTATTCACATCTTCAATTTTGAAATTTGACAAAATATATA  999
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTGCAATTCTTTATTCACATCTTCAATTTTGAAATTTGACAAAATCTATA  994

seq1  GG-TATATTCTGTTTTCC  1016
      || |||||||||||||||
seq2  GGTTATATTCTGTTTTCC  1012

seq1: chr13_66137351_66138417
seq2: B6Ng01-070M23.g_162_1221

seq1  CCATCCAGTTCTCTCTCTTTCTTCCATCTGCCTCCTCTGACTGTTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGTTCTCTCTCTTTCTTCCATCTGCCTCCTCTGACTGTTTTATT  50

seq1  CCCCTTTTGAATGAGATTCAACAATGCTCATTAGGGCTTTTCTTCTTGTT  100
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCCCTTTTGAATGAGATTCAACAATGCTTATTAGGGCTTTTCTTCTTGTT  100

seq1  TAGCTTCTTTGGTTCTATGGAATATAGTGTGGATATCCTGTACTTTATGG  150
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TAGCTTCTTTGGTTCTATGGAATATACTGTGGATATCCTGTACTTTATGG  150

seq1  TTAATGTTCACTTGTAAGTGAGTACATATATTCATGTCATTTTGTTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTCACTTGTAAGTGAGTACATATATTCATGTCATTTTGTTTCTG  200

seq1  GGTTACCTCATTCAGGATGATAGTTTCTACCTGTATCCATTGGCCTGGAA  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGTTACCTCACTCAGGATGATAGTTTCTACCTGTATCCATTGGCCTGGAA  250

seq1  AATTCATGATGTCCTTGTTTTTAATAGCTTATTAGTATTCCATTTTGTAA  300
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AATTCATGATGTCCTTGCTTTTAATAGCTTATTAGTATTCCATTTTGTAA  300

seq1  ATAAACCACATTTTCTGTATACGTATTTCGGGTGAGGGACATCTGGATTG  350
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATAAACCACATTTTCTGTATATGTATTTCGGGTGAGGGACATCTGGATTG  350

seq1  TTTGCAGTTTCTAGTTGTTACAAATAAAATAGGATATGTCTCTATTTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGTTTCTAGTTGTTACAAATAAAATAGGATATGTCTCTATTTGGG  400

seq1  CAAGTTTTCATTGGCCATTCCCTCAGTCTCTGATCCAGCTTTGCCTCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTTCATTGGCCATTCCCTCAGTCTCTGATCCAGCTTTGCCTCTGC  450

seq1  ATTTCTCTTTGACAGGACAAATATGTTCTTTGTGTCTACAGCGTTGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTTTGACAGGACAAATATGTTCTTTGTGTCTACAGCGTTGTGGT  500

seq1  TTAAACTGATTCATAATTTTCATAATTCAAAAATTTAGCAAAATTTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTGATTCATAATTTTCATAATTCAAAAATTTAGCAAAATTTTATT  550

seq1  AATGTTACAGTTTAAACTGGTGTACCTCATGTTTCTGCAATTGAATACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTACAGTTTAAACTGGTGTACCTCATGTTTCTGCAATTGAATACAG  600

seq1  AACTGCAGTTAATGTATAATTCTTTGTAGGAACTTCAGTGCAGAACTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCAGTTAATGTATAATTCTTTGTAGGAACTTCAGTGCAGAACTATG  650

seq1  GGTTCTTTCTATCATTTTTGTTTCCTTGGGTGACATTTGCAGGGGAGTGA  700
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTTCAATCATTTTTGTTTCCTTGGGTGACATTTGCAGGGGAGTGA  700

seq1  GGGTCTTTCTTCTCATGCACCCATACATTCACCATTTGTTCTCTGTCCCT  750
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGGTCTTTCTTCTCATGCACCCATACTTTCACCATTTGTTCTCTGTCCCT  750

seq1  AAAGCACATAAGATACAGTAGACACATTTGCTATTCAATGCTAAACTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACATAAGATACAGTAGACACATTTGCTATTCAATGCTAAACTATT  800

seq1  TTGCAAGCCTGGTGGTTTTATATTTTTAAATTTATTATTTTGGATTTTGT  850
      |||||| |||||||| |||||| ||||||||||||||||||||| ||| |
seq2  TTGCAATCCTGGTGG-TTTATA-TTTTAAATTTATTATTTTGGA-TTTAT  847

seq1  TGTTTGAGGTAAAATTTCTCTGTGAAACCCTTTTTGTCCTGTTAGTAGGT  900
      || ||||||| |||||||||||||||||||||||||||||||||||| ||
seq2  TG-TTGAGGT-AAATTTCTCTGTGAAACCCTTTTTGTCCTGTTAGTA-GT  894

seq1  ATAGACACCACATCAGACACCTATCATGTTTTTGTACAATAAGCATATGC  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACA-CACATCAGACACCTATCATGTTTTTGTACAATAAGCATATGC  943

seq1  TTCTGTGCAATTCTTTATTCACATCTTCAATTTTGAAATTTGACAAAA-T  999
      |||| ||||||||||||||| |||| |||| |||||||||||| |||| |
seq2  TTCTTTGCAATTCTTTATTC-CATC-TCAA-TTTGAAATTTGAAAAAATT  990

seq1  ATATAGGTATA-TTCTGTTTTCCAGGAT---GACATATG-CTCA-TGACA  1043
      ||||||||||| ||||||||  || |||    ||||||| |||| | |||
seq2  ATATAGGTATATTTCTGTTT--CAAGATAGACACATATGCCTCATTAACA  1038

seq1  CCAATACAACCTGAGGCTTCAGAG  1067
      ||||||||  |||| |||||||||
seq2  CCAATACA--CTGAAGCTTCAGAG  1060