BAC Information

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BAC

Clone NameB6Ng01-072L07
Chromosome13 (Build37)
Map Location 44,463,994 - 44,565,673
singlet/doubletdoublet
Overlap geneEG667157
Upstream geneSirt5, Nol7, Ranbp9, LOC637627, Ccdc90a, Rnf182, LOC100039403, Cd83, LOC100039432, A730030A06, EG637868
Downstream geneJarid2, Dtnbp1, Hsp25-ps1, LOC100039502, LOC667204, LOC100039533, Mylip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072L07.bB6Ng01-072L07.g
ACCDH890046DH890047
length1,2071,048
definitionDH890046|Mus musculus domesticus DNA, BAC clone: B6Ng01-072L07, 5' end.DH890047|Mus musculus domesticus DNA, BAC clone: B6Ng01-072L07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,463,994 - 44,465,222)(44,564,621 - 44,565,673)
sequence
gaattcagctggatctttaaaaaaccaactcctttggggctcttttctta
ccctatcccccccaccgttttcacagcagaatttatcacttcctccctcc
taagtcaccgtgtgccactacaaggcaaatgcattctcatactcaattag
gcaaaaaagcagaaaagtctcaaagaaatccaagtctgtctgtccatcca
ctccccctccttaacactgagctgtggttaaagcagcactgatattggga
atggctgaaactttactacgccaggctttgtcttcttctaaacctgtgcg
ctggccctctcctctttgtctcctctatcagtctgtgcagtctacagaag
acctaggccgggtcattttgtccttagctctcccaacctacaaggacagt
agttttccatatatactggagagtttatttggttttgtttagttgctgta
gggctgagatggaacacagggccttgtcgcatgccccactaacgttctat
cactgagctgtgttcagtccacagtacattgatgggaactcagtgactcc
aggtctatgattttcatgcagatcagggaactcggtagccatcctacaga
aaccatccaagctggctttgcaagggagatatctcaaaggctgggaatat
agcttgatagtagatggttatctagcacatataaggctccaggttcagtc
cacagcaccgcaaaaaatatcataaaaaccaacggtagataggaacaatg
gagatactgcatctgtggcaggatgccagaagcacaggaagccattgtcc
tgtgctgtgagtccatgctcactcacgtgcctgcatcctttggatttccc
ttttctcagagaagagaaaggcgtttctgttccatattttctctcactta
aggactggtccagcctcaacaacctgtgccaagaagcagacagcgtagcc
gtaagactttttcccccctagataaaagtatcattatgcattcaccccag
aagatgaaggcacatttgtccggttccaacagcaagcaagaaaaacccct
gctgagcagaattgaagaaagatctctgcaattaatccgcgaatgggact
ggtaaacctcttccaagtccagcaagggatctgaacaagcgctgcagaaa
taacaggtgcgcaagaacgtgagacaaaagagaatcctcataacatcaat
caagccc
gaattcacctctaaccaaaaactgagatgaacatatgtccgataaattca
tagaagcaacagtaacaacgacctaactccctgtttttcacccgacctga
caaatactttttactcttttctcctttctgtatacctggatgtttgtcag
cattagctcaagagctggccccggggccattcctgtggggctgttgctta
gaagagttcagtggccaagttctggtaaaagactggtaaataattctgcc
caggtgtaaggggctttccttggaggtgataggttttggggcccgctttc
ctgggaggtgacaggtcttggggcccagcgtgtcattacttagcctgtag
atctgattttctttgaaaacaaaacaaaacccctcaaaaaccctgtgttt
ggaacttcccgtgctgagcccacgccagtcttgaggtttcctaagacttg
ctgagtaaaaacagtactcactatgagtgtcttcctctgccttcctctcc
gggaagactggggatacagtgaccttgtggtaccgtggtgatgtttctct
gcaccttgattttttttctttccatcagagtccttgtggctcaataggta
tgagaggggtgtgttttatggaagaacatgggtacagcccgactgtttcc
ccggtcatctgctatgtatttactaacttcctcaagccaggccagggaaa
cacaaactctctaatgcttctcagtggattgtgcaaataaaaacaagccg
gtcagctctagaagtctccaaagagcttggattcatatccctgagaactc
agagaccatcccctgccaaagagagtgtctgacgtggagggaagggtgac
tggatacagctatgccgcagagacacggccttgtgactgcctccttcaga
cagccttttgtggcctggtgtcttaggctatttcacaaactgctcacatc
tctgctttggccctctgatttaagtgcggttattagtacatgggtaagag
agaagaatgtccaaggatttgtagccaaaagaggctttctcccgagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_44463994_44465222
seq2: B6Ng01-072L07.b_42_1248

seq1  GAATTCAGCTGGATCTTTAAAAAACCAACTCCTTTGGGGCTCTTTTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTGGATCTTTAAAAAACCAACTCCTTTGGGGCTCTTTTCTTA  50

seq1  CCCTATCCCCCCCACCGTTTTCACAGCAGAATTTATCACTTCCTCCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATCCCCCCCACCGTTTTCACAGCAGAATTTATCACTTCCTCCCTCC  100

seq1  TAAGTCACCGTGTGCCACTACAAGGCAAATGCATTCTCATACTCAATTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCACCGTGTGCCACTACAAGGCAAATGCATTCTCATACTCAATTAG  150

seq1  GCAAAAAAGCAGAAAAGTCTCAAAGAAATCCAAGTCTGTCTGTCCATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAAGCAGAAAAGTCTCAAAGAAATCCAAGTCTGTCTGTCCATCCA  200

seq1  CTCCCCCTCCTTAACACTGAGCTGTGGTTAAAGCAGCACTGATATTGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCTCCTTAACACTGAGCTGTGGTTAAAGCAGCACTGATATTGGGA  250

seq1  ATGGCTGAAACTTTACTACGCCAGGCTTTGTCTTCTTCTAAACCTGTGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGAAACTTTACTACGCCAGGCTTTGTCTTCTTCTAAACCTGTGCG  300

seq1  CTGGCCCTCTCCTCTTTGTCTCCTCTATCAGTCTGTGCAGTCTACAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCTCTCCTCTTTGTCTCCTCTATCAGTCTGTGCAGTCTACAGAAG  350

seq1  ACCTAGGCCGGGTCATTTTGTCCTTAGCTCTCCCAACCTACAAGGACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGCCGGGTCATTTTGTCCTTAGCTCTCCCAACCTACAAGGACAGT  400

seq1  AGTTTTCCATATATACTGGAGAGTTTATTTGGTTTTGTTTAGTTGCTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCCATATATACTGGAGAGTTTATTTGGTTTTGTTTAGTTGCTGTA  450

seq1  GGGCTGAGATGGAACACAGGGCCTTGTCGCATGCCCCACTAACGTTCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGAGATGGAACACAGGGCCTTGTCGCATGCCCCACTAACGTTCTAT  500

seq1  CACTGAGCTGTGTTCAGTCCACAGTACATTGATGGGAACTCAGTGACTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGCTGTGTTCAGTCCACAGTACATTGATGGGAACTCAGTGACTCC  550

seq1  AGGTCTATGATTTTCATGCAGATCAGGGAACTCGGTAGCCATCCTACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTATGATTTTCATGCAGATCAGGGAACTCGGTAGCCATCCTACAGA  600

seq1  AACCATCCAAGCTGGCTTTGCAAGGGAGATATCTCAAAGGCTGGGAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCCAAGCTGGCTTTGCAAGGGAGATATCTCAAAGGCTGGGAATAT  650

seq1  AGCTTGATAGTAGATGGTTATCTAGCACATATAAGGCTCCAGGTTCAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGATAGTAGATGGTTATCTAGCACATATAAGGCTCCAGGTTCAGTC  700

seq1  CACAGCACCGCAAAAAATATCATAAAAACCAACGGTAGATAGGAACAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCACCGCAAAAAATATCATAAAAACCAACGGTAGATAGGAACAATG  750

seq1  GAGATACTGCATCTGTGGCAGGATGCCAGAAGCACAGGAAGCCATTGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACTGCATCTGTGGCAGGATGCCAGAAGCACAGGAAGCCATTGTCC  800

seq1  TGTGCTGTGAGTCCATGCTCACTCACGTGCCTGCATCCTTTGGATTTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGTGAGTCCATGCTCACTCACGTGCCTGCATCCTTTGGATTTCCC  850

seq1  TTTTCTCAGAGAAGAGAAAGGCGTTTCTGTTCCATATTTTCTCTCACTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAGAGAAGAGAAAGGCGTTTCTGTTCCATATTTTCTCTCACTTA  900

seq1  AGGACTGGTCCAGCCTCAACAACCTGTGCCAAGAAGCAGACAGCGTAGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGGTCCAGCCTCAACAACCTGTGCCAAGAAGCAGACAGCGTAGCC  950

seq1  GTAAGGACTTTTTCCCCCCTAGATAAATGTATCATTATGCATTCACCCCA  1000
      |||| |||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTAA-GACTTTTTCCCCCCTAGATAAAAGTATCATTATGCATTCACCCCA  999

seq1  GAGGATG-AGGCACATTGTTCCGTTTCCAACAGCCAGCAAGAAAAACCCC  1049
      || |||| |||||||||  |||| |||||||||| |||||||||||||||
seq2  GAAGATGAAGGCACATTTGTCCGGTTCCAACAGCAAGCAAGAAAAACCCC  1049

seq1  TGCTGAGCAGAA-TGAAGAAAG-TCTCTGCAATTAATCGGCAGAGTGGAA  1097
      |||||||||||| ||||||||| ||||||||||||||| || || ||| |
seq2  TGCTGAGCAGAATTGAAGAAAGATCTCTGCAATTAATCCGC-GAATGGGA  1098

seq1  CTGTTAACCTTCTCCCAGGTTCCCAAGCACAGGGATCCTGACCAGGCGGC  1147
      ||| ||| | ||| ||| ||   | |||| |||||| |||| || || ||
seq2  CTGGTAAACCTCTTCCAAGT---CCAGCA-AGGGAT-CTGAACAAGC-GC  1142

seq1  TGCAGAAATTAACCAGGGGTTGGCGGCCAAGGACGGGTAGAGCAGAGGGA  1197
      |||||||||  | ||||     |||  |||| ||| | |||  | || | 
seq2  TGCAGAAAT--AACAGG----TGCG--CAAGAACGTG-AGACAAAAGAG-  1182

seq1  GAAATCTCTCATTAACAATCCCAATCAAGCCC  1229
        |||| |||| |||||    |||||||||||
seq2  --AATC-CTCA-TAACA---TCAATCAAGCCC  1207

seq1: chr13_44564621_44565673
seq2: B6Ng01-072L07.g_65_1112 (reverse)

seq1  AGCTCGGGGAGAAAGCTCCTTTTTGCTTCCAAATCCCTGGACCTTTCTCT  50
      ||||| ||||||||||  ||||| || | ||||||| ||||| ||  |||
seq2  AGCTC-GGGAGAAAGCCTCTTTTGGC-TACAAATCCTTGGACATTCTTCT  48

seq1  CTCTTACCCATGTACTAATTACCGCACTTAAATCAGAGGGCCAAAGCAGA  100
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTCTTACCCATGTACTAATAACCGCACTTAAATCAGAGGGCCAAAGCAGA  98

seq1  GATGGTGAGCAGTTTGTGAAATAGGCCCTAAGACACCAGGCCACAAAAGG  150
      ||| ||||||||||||||||||||  ||||||||||||||||||||||||
seq2  GAT-GTGAGCAGTTTGTGAAATAG--CCTAAGACACCAGGCCACAAAAGG  145

seq1  CTGTCTGAAGGAGGCAGTCACAAGGCCGTGTCTCTGCGGCATAGCTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGAAGGAGGCAGTCACAAGGCCGTGTCTCTGCGGCATAGCTGTAT  195

seq1  CCAGTCACCCTTCCCTCCACGTCAGACACTCTCTTTGGCAGGGGATGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCACCCTTCCCTCCACGTCAGACACTCTCTTTGGCAGGGGATGGTC  245

seq1  TCTGAGTTCTCAGGGATATGAATCCAAGCTCTTTGGAGACTTCTAGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTCTCAGGGATATGAATCCAAGCTCTTTGGAGACTTCTAGAGCT  295

seq1  GACCGGCTTGTTTTTATTTGCACAATCCACTGAGAAGCATTAGAGAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGGCTTGTTTTTATTTGCACAATCCACTGAGAAGCATTAGAGAGTTT  345

seq1  GTGTTTCCCTGGCCTGGCTTGAGGAAGTTAGTAAATACATAGCAGATGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCCCTGGCCTGGCTTGAGGAAGTTAGTAAATACATAGCAGATGAC  395

seq1  CGGGGAAACAGTCGGGCTGTACCCATGTTCTTCCATAAAACACACCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGAAACAGTCGGGCTGTACCCATGTTCTTCCATAAAACACACCCCTC  445

seq1  TCATACCTATTGAGCCACAAGGACTCTGATGGAAAGAAAAAAAATCAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACCTATTGAGCCACAAGGACTCTGATGGAAAGAAAAAAAATCAAGG  495

seq1  TGCAGAGAAACATCACCACGGTACCACAAGGTCACTGTATCCCCAGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGAAACATCACCACGGTACCACAAGGTCACTGTATCCCCAGTCTT  545

seq1  CCCGGAGAGGAAGGCAGAGGAAGACACTCATAGTGAGTACTGTTTTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGAGAGGAAGGCAGAGGAAGACACTCATAGTGAGTACTGTTTTTACT  595

seq1  CAGCAAGTCTTAGGAAACCTCAAGACTGGCGTGGGCTCAGCACGGGAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGTCTTAGGAAACCTCAAGACTGGCGTGGGCTCAGCACGGGAAGT  645

seq1  TCCAAACACAGGGTTTTTGAGGGGTTTTGTTTTGTTTTCAAAGAAAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACACAGGGTTTTTGAGGGGTTTTGTTTTGTTTTCAAAGAAAATCA  695

seq1  GATCTACAGGCTAAGTAATGACACGCTGGGCCCCAAGACCTGTCACCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTACAGGCTAAGTAATGACACGCTGGGCCCCAAGACCTGTCACCTCC  745

seq1  CAGGAAAGCGGGCCCCAAAACCTATCACCTCCAAGGAAAGCCCCTTACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGCGGGCCCCAAAACCTATCACCTCCAAGGAAAGCCCCTTACAC  795

seq1  CTGGGCAGAATTATTTACCAGTCTTTTACCAGAACTTGGCCACTGAACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAGAATTATTTACCAGTCTTTTACCAGAACTTGGCCACTGAACTC  845

seq1  TTCTAAGCAACAGCCCCACAGGAATGGCCCCGGGGCCAGCTCTTGAGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGCAACAGCCCCACAGGAATGGCCCCGGGGCCAGCTCTTGAGCTA  895

seq1  ATGCTGACAAACATCCAGGTATACAGAAAGGAGAAAAGAGTAAAAAGTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGACAAACATCCAGGTATACAGAAAGGAGAAAAGAGTAAAAAGTAT  945

seq1  TTGTCAGGTCGGGTGAAAAACAGGGAGTTAGGTCGTTGTTACTGTTGCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGGTCGGGTGAAAAACAGGGAGTTAGGTCGTTGTTACTGTTGCTT  995

seq1  CTATGAATTTATCGGACATATGTTCATCTCAGTTTTTGGTTAGAGGTGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAATTTATCGGACATATGTTCATCTCAGTTTTTGGTTAGAGGTGAA  1045

seq1  TTC  1053
      |||
seq2  TTC  1048