BAC Information

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BAC

Clone NameB6Ng01-073P02
Chromosome13 (Build37)
Map Location 38,803,438 - 38,951,210
singlet/doubletdoublet
Overlap genenone
Upstream geneRreb1, Ssr1, Cage1, Riok1, Dsp, 6530403A03Rik, Bmp6, Txndc5, Muted, Eef1e1, LOC621102
Downstream geneSlc35b3, EG666867, LOC100041779, LOC382747, A230103O09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073P02.bB6Ng01-073P02.g
ACCDH890926DH890927
length853302
definitionDH890926|Mus musculus domesticus DNA, BAC clone: B6Ng01-073P02, 5' end.DH890927|Mus musculus domesticus DNA, BAC clone: B6Ng01-073P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,950,362 - 38,951,210)(38,803,438 - 38,803,739)
sequence
gaattctcagctgagtaaacacctccatatccttttgcctgtgggcaagc
tatggggtggggcattttcttccttagcaattgatgttagtgggcccagc
tcactgcaggcattgccacctcggagggaggtcctgggtagtataagaag
aaggctgagtaagccatgaggattaagtcagtacagagtttctccaggcc
ctctgtgtcagttcctgcctctgggttcttacccagagtcctttgccttg
gcttctctcaatggactgtgccccgagagtggtaaaatagaacaaaccgt
tttctcctcaagttgcttttggtcgtggtgttttattacagtgatagaaa
ccttaactaagatattttccatcaaccagagtcatgcatcccataaatca
tttttaaagcttaggtattgtcttagtcagggtttctattcaattgaccc
cttgtcaacttgacacacaaacacatcactagtaagcctcaacccttaag
ttcttattcatccccaagatctaaataactttataagtcccacagtcttt
acatattaaaagtccaatcactttaaaatatccaatatcttttaaaatct
ttcaaagtctctttaactggggactccaataaaaataccttctttccttc
aagaggaaaaaatatcagggcacagttcacaataaaaagcaaaaaaatca
atctccaaccatccaatgtctgggatccaactcacaatcttctggtctcc
tccaagggcttgggtcacttcttccagccatgccctttgtagcacacaca
ttgccttctaggctcagatgcctgtactccattgctgctgtcttccacta
taa
ttttatggcagccctggaaattccatatggctgctccagcacaattagaa
gtggggggagtagtacgtcatctttcaatggattgacgtaaactttttac
cgttacctagaattagagggatcttattgaggcgtgactaaaggggccac
tgtaacagcaatgaaaaggataaatatttgaaaatacgcaagagtcaatg
gtgaggaaaataggtatttgtctttacatctaattacaacttttgattaa
tttttgttatttaaagttagtgtgtgtgtgtgtgtgtgtgtgtgtgtaga
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_38950362_38951210
seq2: B6Ng01-073P02.b_32_885 (reverse)

seq1  TTATAGTGGAAGACAGCAGCAATGGAGTACAGGCATCTGGAGCCTAGAGG  50
      |||||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  TTATAGTGGAAGACAGCAGCAATGGAGTACAGGCATCT-GAGCCTAGAAG  49

seq1  GCAATGTGTGTGCTACAAAGGGCATGGCTGG-AGAAGTGACCCAAGCCCT  99
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCAATGTGTGTGCTACAAAGGGCATGGCTGGAAGAAGTGACCCAAGCCCT  99

seq1  TGGAGGAGACCAGAAGATTGTGAGTTGGATCCCAGACATTGGATGGTTGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAGACCAGAAGATTGTGAGTTGGATCCCAGACATTGGATGGTTGG  149

seq1  AGATTGATTTTTTTGCTTTTTATTGTG-ACTGTGCCCTGATATTTTTTCC  198
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGATTGATTTTTTTGCTTTTTATTGTGAACTGTGCCCTGATATTTTTTCC  199

seq1  TCTTGAAGG-AAGAAGGTA-TTTTATTGGAGTCCCCAGTT-AAGAGACTT  245
      ||||||||| ||||||||| |||||||||||||||||||| |||||||||
seq2  TCTTGAAGGAAAGAAGGTATTTTTATTGGAGTCCCCAGTTAAAGAGACTT  249

seq1  TGAAAGATTTTAAAAGATATTGGATATTTTAAAGTGATTGGACTTTTAAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGATTTTAAAAGATATTGGATATTTTAAAGTGATTGGACTTTTAAT  299

seq1  ATGTAAAGACTGTGGGACTTTTAAAGTTATTTAGATCTTGGGGATGAATA  345
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATGTAAAGACTGTGGGACTTATAAAGTTATTTAGATCTTGGGGATGAATA  349

seq1  AGAACTTAAGGGTTGAGGCTTACTAGTGATGTGTTTGTGTGTCAAGTTGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTAAGGGTTGAGGCTTACTAGTGATGTGTTTGTGTGTCAAGTTGA  399

seq1  CAAGGGGTCAATTGAATAGAAACCCTGACTAAGACAATACCTAAGCTTTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGTCAATTGAATAGAAACCCTGACTAAGACAATACCTAAGCTTTA  449

seq1  AAAATGATTTATGGGATGCATGACTCTGGTTGATGGAAAATATCTTAGTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATTTATGGGATGCATGACTCTGGTTGATGGAAAATATCTTAGTT  499

seq1  AAGGTTTCTATCACTGTAATAAAACACCACGACCAAAAGCAACTTGAGGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTCTATCACTGTAATAAAACACCACGACCAAAAGCAACTTGAGGA  549

seq1  GAAAACGGTTTGTTCTATTTTACCACTCTCGGGGCACAGTCCATTGAGAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACGGTTTGTTCTATTTTACCACTCTCGGGGCACAGTCCATTGAGAG  599

seq1  AAGCCAAGGCAAAGGACTCTGGGTAAGAACCCAGAGGCAGGAACTGACAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAAGGCAAAGGACTCTGGGTAAGAACCCAGAGGCAGGAACTGACAC  649

seq1  AGAGGGCCTGGAGAAACTCTGTACTGACTTAATCCTCATGGCTTACTCAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGCCTGGAGAAACTCTGTACTGACTTAATCCTCATGGCTTACTCAG  699

seq1  CCTTCTTCTTATACTACCCAGGACCTCCCTCCGAGGTGGCAATGCCTGCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTCTTATACTACCCAGGACCTCCCTCCGAGGTGGCAATGCCTGCA  749

seq1  GTGAGCTGGGCCCACTAACATCAATTGCTAAGGAAGAAAATGCCCCACCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTGGGCCCACTAACATCAATTGCTAAGGAAGAAAATGCCCCACCC  799

seq1  CATAGCTTGCCCACAGGC-AAATCATATGGAGGTGTTTACTCAGCTGAGA  844
      |||||||||||||||||| |||  ||||||||||||||||||||||||||
seq2  CATAGCTTGCCCACAGGCAAAAGGATATGGAGGTGTTTACTCAGCTGAGA  849

seq1  ATTCC  849
      |||||
seq2  ATTCC  854

seq1: chr13_38803438_38803739
seq2: B6Ng01-073P02.g_76_377

seq1  TTTTATGGCAGCCCTGGAAATTCCATATGGCTGCTCCAGCACAATTAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGGCAGCCCTGGAAATTCCATATGGCTGCTCCAGCACAATTAGAA  50

seq1  GTGGGGGGAGTAGTACGTCATCTTTCAATGGATTGACGTAAACTTTTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGGAGTAGTACGTCATCTTTCAATGGATTGACGTAAACTTTTTAC  100

seq1  CGTTACCTAGAATTAGAGGGATCTTATTGAGGCGTGACTAAAGGGGCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTACCTAGAATTAGAGGGATCTTATTGAGGCGTGACTAAAGGGGCCAC  150

seq1  TGTAACAGCAATGAAAAGGATAAATATTTGAAAATACGCAAGAGTCAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACAGCAATGAAAAGGATAAATATTTGAAAATACGCAAGAGTCAATG  200

seq1  GTGAGGAAAATAGGTATTTGTCTTTACATCTAATTACAACTTTTGATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAAAATAGGTATTTGTCTTTACATCTAATTACAACTTTTGATTAA  250

seq1  TTTTTGTTATTTAAAGTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTATTTAAAGTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGA  300

seq1  GG  302
      ||
seq2  GG  302