BAC Information

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BAC

Clone NameB6Ng01-074B08
Chromosome6 (Build37)13 (Build37)
Map Location 18,835,520 - 18,835,96828,392,941 - 28,394,006
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074B08.bB6Ng01-074B08.g
ACCDH891030DH891031
length4711,059
definitionDH891030|Mus musculus domesticus DNA, BAC clone: B6Ng01-074B08, 5' end.DH891031|Mus musculus domesticus DNA, BAC clone: B6Ng01-074B08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,520 - 18,835,968)(28,392,941 - 28,394,006)
sequence
gaattctttgttagttctgagccgcattttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcggaaactttggagtttcat
taggtcccatttgtcgattctcgatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttaaatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacacaataacaaccagatgtgccagcaccaattgttgaaaatc
cacagctggatcttatgaaga
gaattcaattctcagtgcccacttaaaaaacagtgagatttgagtgggta
atacctagttgtaatccttgatgtggccaggggaggaggcaaagttagga
aattcttatgaggaagtaagagagaaaaatgaaaaacttcatagtgagtg
agataacttgtctcaaaaccaaattacagaaggattaaggaagatactag
acattgacctctggtgtcacatgtaccacatgcctacattcagacatgtg
atatcacacgagcgtgcgagagcgcgcgggcgcgcgcacacacacacaca
cacacaattaccacaagccatgcctactccaacaaagccacgtctactca
aacagagccacatccacagtgacacacctacttcaacaaggccatgtcta
ctccaaggaggccacatctacaatgacctacctacctactctttgtgcac
acactatccattcttagtttctaaggtcaatcttgtccaagattgcatga
aggttgttcttctttggtttggcttcctctcataatttaaggagtcccaa
gtctgcaacaatgagccttttggagatgtcttatctttcttttttctttt
ttgttttttttcctttattctttttttattagatattttctttatataca
tttcaaatttcaaatgctataccgaacgttccctataccctccccccacc
ctgctcccctacacacccactcccactttttggccctgacattcccctgt
actggggcatataaaatttgcaaaaccatggggcctctcttcccaatgat
ggatgactaggccatgtctgctacatatgaagctagagacatgcgctctg
tggtactggttagttcatattgtcgtgcacctataggggtgcggacccct
tcacctccttaggagctttctctagcttctccattgggggagcctgagat
acatctatagatgacagtgagctgcacttttgtagtggcagacactggca
tctctcaaacacacagctatatagggtcccatcacaaaatctagatagca
ttgcaatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835520_18835968
seq2: B6Ng01-074B08.b_39_487 (reverse)

seq1  ATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCTTGTAGAAGAAT  50
      ||||||||||||||||||||||||| |||||||||||  |||||||||||
seq2  ATTTTCAACAATTGGTGCTGGCACATCTGGTTGTTATTGTGTAGAAGAAT  50

seq1  GTGAATCGATCCATACTTATCTCCATGTACTAAGGTCAAATCTAAGTGGA  100
      | |||||||||||||||||||||| |||||||||||||||| ||||||||
seq2  GCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATTTAAGTGGA  100

seq1  TCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAA  150

seq1  GTGGGGAAAAGCCTTGAAGATATGGGCAGAGGGGAAAAGTTCCTGAACAG  200
      |||||||||||||||||||||||||||| ||||||||| |||||||||||
seq2  GTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAG  200

seq1  AACAGCAATGGC-TGTGCTGTGAGGTAGAGAATCGACAAATGGGACCTAA  249
      |||||||||||| |||||||| || | |||||||||||||||||||||||
seq2  AACAGCAATGGCTTGTGCTGTAAGATCGAGAATCGACAAATGGGACCTAA  250

seq1  TGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAA  299
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGAAACTCCAAAGTTTCCGCAAGGCAAAAGACACCGTCAATAAGACAAAA  300

seq1  AGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAG  350

seq1  GGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAA  400

seq1  AATCAAATAACCCCATTAATAAATGGGGCTCAGAACTGAACAAAGAATTC  449
      ||||||||||||||||||| ||||| ||||||||||| ||||||||||||
seq2  AATCAAATAACCCCATTAAAAAATGCGGCTCAGAACT-AACAAAGAATTC  449

seq1: chr13_28392941_28394006
seq2: B6Ng01-074B08.g_67_1125

seq1  GAATTCAATTCTCAGTGCCCACTTAAAAAACAGTGAGATTTGAGTGGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCTCAGTGCCCACTTAAAAAACAGTGAGATTTGAGTGGGTA  50

seq1  ATACCTAGTTGTAATCCTTGATGTGGCCAGGGGAGGAGGCAAAGTTAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAGTTGTAATCCTTGATGTGGCCAGGGGAGGAGGCAAAGTTAGGA  100

seq1  AGTTCTTATGAGGAAGTAAGAGAGAAAAATGAGAAACTTCATAGTTAGTG  150
      | |||||||||||||||||||||||||||||| |||||||||||| ||||
seq2  AATTCTTATGAGGAAGTAAGAGAGAAAAATGAAAAACTTCATAGTGAGTG  150

seq1  AGATAGCTTGTCTCAAAACCAAATTACAGAAGGATTAAGGAAGATACTAG  200
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACTTGTCTCAAAACCAAATTACAGAAGGATTAAGGAAGATACTAG  200

seq1  ACATTGACCTCTGGTGTCACATGTACCACATGCCTACATTCAGACATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGACCTCTGGTGTCACATGTACCACATGCCTACATTCAGACATGTG  250

seq1  ATATCACACGAGCGTGCGAGAGCGCGCGGGCGCGCGCACACACACACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACACGAGCGTGCGAGAGCGCGCGGGCGCGCGCACACACACACACA  300

seq1  CACACAATTACCACAAGCCATGCCTACTCCAACAAAGCCACGTCTACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAATTACCACAAGCCATGCCTACTCCAACAAAGCCACGTCTACTCA  350

seq1  AACAGAGCCACATCCACAGTGACACACCTACTTCAACAAGGCCATGTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGCCACATCCACAGTGACACACCTACTTCAACAAGGCCATGTCTA  400

seq1  CTCCAAGGAGGCCACATCTACAATGACCTACCTACCTACTCTTTGTGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGGAGGCCACATCTACAATGACCTACCTACCTACTCTTTGTGCAC  450

seq1  ACACTATCCATTCTTAGTTTCTAAGGTCAATCTTGTCCAAGATTGCATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATCCATTCTTAGTTTCTAAGGTCAATCTTGTCCAAGATTGCATGA  500

seq1  AGGTTGTTCTTCTTTGGTTTGGCTTCCTCTCATAATTTAAGGAGTCCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGGTTGTTCTTCTTTGGTTTGGCTTCCTCTCATAATTTAAGGAGTCCCAA  550

seq1  GTCTGCAGCAATGAGCCTTTTGGAGATGTCTT-TCTTTCTTTTTTCTTTT  599
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  GTCTGCAACAATGAGCCTTTTGGAGATGTCTTATCTTTCTTTTTTCTTTT  600

seq1  TTGTTTTTTTTCCTTT-TTCTTTTTTTATTAGATATTTTCTTTATATACA  648
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTGTTTTTTTTCCTTTATTCTTTTTTTATTAGATATTTTCTTTATATACA  650

seq1  TTTCAAATTTCAAATGCTATACCGAAGGTTCCCTATACCCTCCCCCCACC  698
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTCAAATTTCAAATGCTATACCGAACGTTCCCTATACCCTCCCCCCACC  700

seq1  CTGCTCCCCTACACACCCACTCCCACTTTTTGGCCCTGACATTCCCCTGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCCCTACACACCCACTCCCACTTTTTGGCCCTGACATTCCCCTGT  750

seq1  ACTGGGGCATATAAAATTTGCAATACCAAGGGGCCTCTCTTCCCAATGAT  798
      ||||||||||||||||||||||| |||| |||||||||||||||||||||
seq2  ACTGGGGCATATAAAATTTGCAAAACCATGGGGCCTCTCTTCCCAATGAT  800

seq1  GGCTGACTAGGCCATCGTCTGCTACATATGAAGCTAGAGACATGCGCTCT  848
      || |||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGATGACTAGGCCAT-GTCTGCTACATATGAAGCTAGAGACATGCGCTCT  849

seq1  GGCGGTACTGGTTAGTTCATATTGTTGTGCCACCTATAGGGTTGCGGACC  898
       | |||||||||||||||||||||| ||| ||||||||||| ||||||||
seq2  -GTGGTACTGGTTAGTTCATATTGTCGTG-CACCTATAGGGGTGCGGACC  897

seq1  CCTTCAGCTCCTTAGGTGCTTTCTCTAGCTTCTCCATTGGGGG-CCCTGT  947
      |||||| ||||||||| ||||||||||||||||||||||||||  |||| 
seq2  CCTTCACCTCCTTAGGAGCTTTCTCTAGCTTCTCCATTGGGGGAGCCTGA  947

seq1  GTTCCATCTTATAGATGACTGTGAGCATCCACTTTTGTATTTGCCAGGCA  997
      | | |||| |||||||||| |||||| | ||||||||||  || ||| ||
seq2  GATACATC-TATAGATGACAGTGAGC-TGCACTTTTGTA-GTGGCAGACA  994

seq1  CTGGCATCCCTCATACGAGACAGCTATATCAGGGTCCCTTCAGCAAAATC  1047
      |||||||| |||| || | |||||||||| |||||||| ||| |||||||
seq2  CTGGCATCTCTCAAAC-ACACAGCTATAT-AGGGTCCCATCA-CAAAATC  1041

seq1  TTGCTAGCATATGCAATAG  1066
      | | |||||| ||||||||
seq2  TAGATAGCAT-TGCAATAG  1059