BAC Information

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BAC

Clone NameB6Ng01-075I15
Chromosome13 (Build37)
Map Location 50,060,827 - 50,201,074
singlet/doubletdoublet
Overlap geneLOC625110, LOC676907, LOC667546, LOC667552
Upstream geneBC010304, C030044B11Rik, Wnk2, Ninj1, 1110007C09Rik, Susd3, Fgd3, Bicd2, Ippk, Cenpp, Tes3-ps, Ecm2, Aspn, Omd, Ogn, Nol8, Iars, LOC667488, LOC670357, EG638833, Gm272, EG667503, EG667507, LOC100040099
Downstream geneLOC100040085, LOC100040159, LOC100040176, LOC100040118, Gm906, 2310081J21Rik, LOC676954, LOC667625, LOC667632, EG667637, Fbxw17, Gm806, EG639044, Gm904, LOC100040315, EG667693, LOC100040161, LOC100040190, EG667712, LOC676997, EG667717, Spin1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075I15.bB6Ng01-075I15.g
ACCDH892073DH892074
length1,146395
definitionDH892073|Mus musculus domesticus DNA, BAC clone: B6Ng01-075I15, 5' end.DH892074|Mus musculus domesticus DNA, BAC clone: B6Ng01-075I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,199,917 - 50,201,074)(50,060,827 - 50,061,227)
sequence
gaattctcaacagggaatacttcaatattctttgccttcaggtagttaag
attatagcaatactgagatgacattttacttaatgacaatggctgagatc
aaacaatgagaaattttagcaaagttgagggaagggacatgtcagaagct
gctattgggtgtgtaaactggtgtttaaacagcatggtgggaattggtac
agagtctcctaaaaatagaactaccataagcccaggtgtaccatttctga
gcatgggctcaaaggatgcagtctgcatcctgccaaggacatccatgcac
atccatggtgactgtggtatactcccaatggcaagacaatcaggcatttt
aaaaagacctaaatgaattctatcagagtttgctaatttgaaaaattgga
tatgtaaaggaaagtatccaaacactactgagcatttaaactatcatagg
cggtttagttcttaattagccacaagcattcttatggccaggaaatgaaa
ttcattttcataaaattctgtacctgaagacaaaaaggtacattagtttt
gattatatgaaataataacaaatctaaataaataagtgacaaaaggaagt
tttgtgtctgacttgacacaatctgtgattacagaatgaacagacagggt
tctgcagacagaagacaatgtgacagtgacaataccaaagaaacaacaca
agttccacagagaagctcactttgtcaaaaactaagaaactgatctactc
aagtaggtatcttctaggaggcaaacgtacaatgtaactttctggttgac
acctgaaatacacctgaaagaatgtttggctgaagcagacacaggtgaaa
gaatgtttcctataggaaacatgaaatgacgaataatgtttagatggaac
attaatatgatcctaaagaaagtgggagcttgaggtttggtatgcctagc
tccattttgctactcatagcagtgtaaagcttgtattggttcacattaca
ttgctgagctcacccatggagtcctctacagagaactcacaagacttcta
gtgaaatctgaagatttgctgctccttgaactcagacttcattgcagcct
cccagaatcggctgcaatcaactgcccttgctgactcttgttgtgg
acgtagaagaccaaaaatgagaatgtcacttagagtcttaccaggcagag
agaaattgtgtggttatattttcagacatctttctattaaatgatggcaa
gagcacatgtgaactttggagcatgtcaggcttagttagataatatctaa
tgcttcttattgctttctatctttgggttagatcatagattctgagcatt
aaattaaattaaaaagcagtatccctaaaatgggaataatattggtatat
aacataaggactttgtgttttggtgagacttaaatgataaaatgtgtata
aattgctcagcatagagccaggaacatagggattacccaagtgcatgggt
actcaccatagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_50199917_50201074
seq2: B6Ng01-075I15.b_45_1190 (reverse)

seq1  CCAC-ACAAGAGTCAGCAAGGGCAGTTGAATGCAGCCGATTCTGTGAGGC  49
      |||| |||||||||||||||||||||||| |||||||||||||| |||||
seq2  CCACAACAAGAGTCAGCAAGGGCAGTTGATTGCAGCCGATTCTGGGAGGC  50

seq1  TGCCAATGAAGTCTGAGTCCAAGGAAGCAGCAAAATCCTCAGGAATCTCA  99
      || ||||||||||||||| ||||| |||||| ||||| ||||  || |||
seq2  TG-CAATGAAGTCTGAGTTCAAGG-AGCAGC-AAATCTTCAG--ATTTCA  95

seq1  CTAGAAGTTCTTTGGTGAGGTTCTCTGTAAGAGGACTCCATGGGTGAAGC  149
      ||||||| ||||  |||| ||||||||| ||||||||||||||||| |||
seq2  CTAGAAG-TCTT--GTGA-GTTCTCTGT-AGAGGACTCCATGGGTG-AGC  139

seq1  TCAGCAATTGTAATGTGAACCAATACAAGCTTTACACCTGCTATGAGTAG  199
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  TCAGCAA-TGTAATGTGAACCAATACAAGCTTTACA-CTGCTATGAGTAG  187

seq1  CAAAATGGAGCTAGGCATACCAAACCTCAAGCTCCCACTTTCTTTAGGAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGGAGCTAGGCATACCAAACCTCAAGCTCCCACTTTCTTTAGGAT  237

seq1  CATATTAATGTTCCATCTAAACATTATTCGTCATTTCATGTTTCCTATAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTAATGTTCCATCTAAACATTATTCGTCATTTCATGTTTCCTATAG  287

seq1  GAAACATTCTTTCACCTGTGTCTGCTTCAGCCAAACATTCTTTCAGGTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATTCTTTCACCTGTGTCTGCTTCAGCCAAACATTCTTTCAGGTGT  337

seq1  ATTTCAGGTGTCAACCAGAAAGTTACATTGTACGTTTGCCTCCTAGAAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGGTGTCAACCAGAAAGTTACATTGTACGTTTGCCTCCTAGAAGA  387

seq1  TACCTACTTGAGTAGATCAGTTTCTTAGTTTTTGACAAAGTGAGCTTCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTACTTGAGTAGATCAGTTTCTTAGTTTTTGACAAAGTGAGCTTCTC  437

seq1  TGTGGAACTTGTGTTGTTTCTTTGGTATTGTCACTGTCACATTGTCTTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAACTTGTGTTGTTTCTTTGGTATTGTCACTGTCACATTGTCTTCT  487

seq1  GTCTGCAGAACCCTGTCTGTTCATTCTGTAATCACAGATTGTGTCAAGTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCAGAACCCTGTCTGTTCATTCTGTAATCACAGATTGTGTCAAGTC  537

seq1  AGACACAAAACTTCCTTTTGTCACTTATTTATTTAGATTTGTTATTATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAAAACTTCCTTTTGTCACTTATTTATTTAGATTTGTTATTATTT  587

seq1  CATATAATCAAAACTAATGTACCTTTTTGTCTTCAGGTACAGAATTTTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAATCAAAACTAATGTACCTTTTTGTCTTCAGGTACAGAATTTTAT  637

seq1  GAAAATGAATTTCATTTCCTGGCCATAAGAATGCTTGTGGCTAATTAAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAATTTCATTTCCTGGCCATAAGAATGCTTGTGGCTAATTAAGA  687

seq1  ACTAAACCGCCTATGATAGTTTAAATGCTCAGTAGTGTTTGGATACTTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACCGCCTATGATAGTTTAAATGCTCAGTAGTGTTTGGATACTTTC  737

seq1  CTTTACATATCCAATTTTTCAAATTAGCAAACTCTGATAGAATTCATTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACATATCCAATTTTTCAAATTAGCAAACTCTGATAGAATTCATTTA  787

seq1  GGTCTTTTTAAAATGCCTGATTGTCTTGCCATTGGGAGTATACCACAGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTTTAAAATGCCTGATTGTCTTGCCATTGGGAGTATACCACAGTC  837

seq1  ACCATGGATGTGCATGGATGTCCTTGGCAGGATGCAGACTGCATCCTTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGATGTGCATGGATGTCCTTGGCAGGATGCAGACTGCATCCTTTG  887

seq1  AGCCCATGCTCAGAAATGGTACACCTGGGCTTATGGTAGTTCTATTTTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCATGCTCAGAAATGGTACACCTGGGCTTATGGTAGTTCTATTTTTA  937

seq1  GGAGACTCTGTACCAATTCCCACCATGCTGTTTAAACACCAGTTTACACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACTCTGTACCAATTCCCACCATGCTGTTTAAACACCAGTTTACACA  987

seq1  CCCAATAGCAGCTTCTGACATGTCCCTTCCCTCAACTTTGCTAAAATTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATAGCAGCTTCTGACATGTCCCTTCCCTCAACTTTGCTAAAATTTC  1037

seq1  TCATTGTTTGATCTCAGCCATTGTCATTAAGTAAAATGTCATCTCAGTAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTTGATCTCAGCCATTGTCATTAAGTAAAATGTCATCTCAGTAT  1087

seq1  TGCTATAATCTTAACTACCTGAAGGCAAAGAATATTGAAGTATTCCCTGT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATAATCTTAACTACCTGAAGGCAAAGAATATTGAAGTATTCCCTGT  1137

seq1  TGAGAATTC  1158
      |||||||||
seq2  TGAGAATTC  1146

seq1: chr13_50060827_50061227
seq2: B6Ng01-075I15.g_67_467

seq1  GAATTCACGTAGAAGACCAAAAATGAGAATGTCACTTAGAGTCTTACCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGTAGAAGACCAAAAATGAGAATGTCACTTAGAGTCTTACCAG  50

seq1  GCAGAGAGAAATTGTGTGGTTATATTTTCAGACATCTTTCTATTAAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAGAAATTGTGTGGTTATATTTTCAGACATCTTTCTATTAAATGA  100

seq1  TGGCAAGAGCACATGTGAACTTTGGAGCATGTCAGGCTTAGTTAGATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGAGCACATGTGAACTTTGGAGCATGTCAGGCTTAGTTAGATAAT  150

seq1  ATCTAATGCTTCTTATTGCTTTCTATCTTTGGGTTAGATCATAGATTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATGCTTCTTATTGCTTTCTATCTTTGGGTTAGATCATAGATTCTG  200

seq1  AGCATTAAATTAAATTAAAAAGCAGTATCCCTAAAATGGGAATAATATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTAAATTAAATTAAAAAGCAGTATCCCTAAAATGGGAATAATATTG  250

seq1  GTATATAACATAAGGACTTTGTGTTTTGGTGAGACTTAAATGATAAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATAACATAAGGACTTTGTGTTTTGGTGAGACTTAAATGATAAAATG  300

seq1  TGTATAAATTGCTCAGCATAGAGCCAGGAACATAGGGATTACCCAAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAATTGCTCAGCATAGAGCCAGGAACATAGGGATTACCCAAGTGC  350

seq1  ATGGGTACTCACCATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTACTCACCATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  400

seq1  G  401
      |
seq2  G  401