BAC Information

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BAC

Clone NameB6Ng01-079G03
Chromosome13 (Build37)
Map Location 68,884,204 - 68,885,331
singlet/doubletsinglet
Overlap geneAdcy2
Upstream geneLOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik
Downstream geneLOC666205, LOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260, 3110006E14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079G03.bB6Ng01-079G03.g
ACCDH894806DH894807
length1,1021,145
definitionDH894806|Mus musculus domesticus DNA, BAC clone: B6Ng01-079G03, 5' end.DH894807|Mus musculus domesticus DNA, BAC clone: B6Ng01-079G03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactcagcagatatctgcagttgttgattaaagaaaagactacta
ttttcagagatacaagctctgtagttcatggtgattttctggtccatatt
tcttgagtccagttgctgtactcttgattcacgattctttcctccattcc
acaacaattacggaggctttccatggaccacttacaggtccatggacctt
tataagtctcagcccatttaattagccccacagcccagtgaagcagacac
tgctgtctgtcccatgtctaataagaggagaatgaaaagctgagacatca
tcacaacttactctccgaatttacagtgacagttaacggttaacggcttc
taaccagtgtccagaaaacaatgacagcaggagtgggcacaggagtggct
gacacaaccttagatagagacctgattgtcccatacaaaagccttgggta
tggtggaactttattttaaactctattttcagtgggagatggaactttcc
ataaagtatgctgaagtcagagactggaatactgcactgagcaaagctgc
ttctgtgtgagcaccagcagcttcaggaacatttccgtctccagttgttt
cttagcaagccagcccagctcaggctagcagctcttctgccttgagactg
caccatccttcatgtaaacctgctttgggacaccacatcgtactatgagt
atgtgcaactttcactttccaatcaatgtgagataaaaaacattgcatgc
agagcatgataccagaatgatttctttggaaagattgggattctggaaga
gagagtttcatgctccactcatgagcacatagatgactcctgaagcaggc
acatgtattttccttttatggatgcagaacagagttgctggtcacagagg
tgagcagggcatcttcagtactgaggcaagtttccaaatctttgttcatc
tgtcccatagaagtgtctcatgcatctcccgggacagctagcaggaacag
ctttcagtgctgcacttgtactcaggagcagattagtgtgcacacatctc
aggacagctcagtgctgactcacgctgtttcccgtggcactaatgatctt
tc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgttccactat
gttcatagcagcattatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatta
aagggtggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaca
cagaagtgatgcccacagtcagctaatggatggatcacagggctccatgg
agagctagagaagtacccaagagctatggatctgcaccctatagtgatca
catatgactacagtacccggagctcttgactctagctgcatatgtatcaa
agatgctagtcgcatcactgaagagagccaatgaacacaacttaatggcc
tgacatgcacgcagtcaaagggatggccgatagagattaggtgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68884204_68885331
seq2: B6Ng01-079G03.b_46_1147

seq1  GAATTCACTCAGCAGATATCTGCAGTTGTTGATTAAAGAAAAGACTACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAGCAGATATCTGCAGTTGTTGATTAAAGAAAAGACTACTA  50

seq1  TTTTCAGAGATACAAGCTCTGTAGTTCATGGTGATTTTCTGGTCCATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGAGATACAAGCTCTGTAGTTCATGGTGATTTTCTGGTCCATATT  100

seq1  TCTTGAGTCCAGTTGCTGTACTCTTGATTCACGATTCTTTCCTCCATTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGTCCAGTTGCTGTACTCTTGATTCACGATTCTTTCCTCCATTCC  150

seq1  ACAACAATTACGGAGGCTTTCCATGGACCACTTACAGGTCCATGGACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAATTACGGAGGCTTTCCATGGACCACTTACAGGTCCATGGACCTT  200

seq1  TATAAGTCTCAGCCCATTTAATTAGCCCCACAGCCCAGTGAAGCAGACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTCTCAGCCCATTTAATTAGCCCCACAGCCCAGTGAAGCAGACAC  250

seq1  TGCTGTCTGTCCCATGTCTAATAAGAGGAGAATGAAAAGCTGAGACATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTGTCCCATGTCTAATAAGAGGAGAATGAAAAGCTGAGACATCA  300

seq1  TCACAACTTACTCTCCGAATTTACAGTGACAGTTAACGGTTAACGGCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACTTACTCTCCGAATTTACAGTGACAGTTAACGGTTAACGGCTTC  350

seq1  TAACCAGTGTCCAGAAAACAATGACAGCAGGAGTGGGCACAGGAGTGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGTGTCCAGAAAACAATGACAGCAGGAGTGGGCACAGGAGTGGCT  400

seq1  GACACAACCTTAGATAGAGACCTGATTGTCCCATACAAAAGCCTTGGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAACCTTAGATAGAGACCTGATTGTCCCATACAAAAGCCTTGGGTA  450

seq1  TGGTGGAACTTTATTTTAAACTCTATTTTCAGTGGGAGATGGAACTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAACTTTATTTTAAACTCTATTTTCAGTGGGAGATGGAACTTTCC  500

seq1  ATAAAGTATGCTGAAGTCAGAGACTGGAATACTGCACTGAGCAAAGCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTATGCTGAAGTCAGAGACTGGAATACTGCACTGAGCAAAGCTGC  550

seq1  TTCTGTGTGAGCACCAGCAGCTTCAGGAACATTTCCGTCTCCAGTTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTGAGCACCAGCAGCTTCAGGAACATTTCCGTCTCCAGTTGTTT  600

seq1  CTTAGCAAGCCAGCCCAGCTCAGGCTAGCAGCTCTTCTGCCTTGAGACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCAAGCCAGCCCAGCTCAGGCTAGCAGCTCTTCTGCCTTGAGACTG  650

seq1  CACCATCCTTCATGTAAACCTGCTTTGGGACACCACATCGTACTATGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCCTTCATGTAAACCTGCTTTGGGACACCACATCGTACTATGAGT  700

seq1  ATGTGCAACTTTCACTTTCCAATCAATGTGAGATAAAAAACATTGCATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCAACTTTCACTTTCCAATCAATGTGAGATAAAAAACATTGCATGC  750

seq1  AGAGCATGATACCAGAATGATTTCTTTGGAAAGATTGGGATTCTGGAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATGATACCAGAATGATTTCTTTGGAAAGATTGGGATTCTGGAAGA  800

seq1  GAGAGTTTCATGCTCCACTCATGAGCACATAGATGACTCCTGAAGCAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTTCATGCTCCACTCATGAGCACATAGATGACTCCTGAAGCAGGC  850

seq1  ACATGTATTTTCC-TTTATGGATGCAGAACAGAGTTGCTGGTCACAGAGG  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACATGTATTTTCCTTTTATGGATGCAGAACAGAGTTGCTGGTCACAGAGG  900

seq1  TGAGCAGGGCATCTTCAGTACTGAGGCAAGTTTCCAAATCTTTGTTCATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGGGCATCTTCAGTACTGAGGCAAGTTTCCAAATCTTTGTTCATC  950

seq1  TGTCCCCATAGAAGGTGTCTCATGCCATCCTCCCGGGACAGCCTAGCAGG  999
      ||| ||||||||| |||||||||| ||| |||||||||||| ||||||||
seq2  TGT-CCCATAGAA-GTGTCTCATG-CAT-CTCCCGGGACAG-CTAGCAGG  995

seq1  GAACCAGCCTTCCAGTGCTGCACTTGTACTCAGGGAGCAGGATTTAGTGT  1049
        | ||| ||| |||||||||||||||||||| |||||||   |||||| 
seq2  --AACAG-CTTTCAGTGCTGCACTTGTACTCA-GGAGCAG--ATTAGTG-  1038

seq1  TGCACACATCCTCAGGGACCAGCCTTCCAGTGCTGGACTCCAACGCTGGT  1099
      ||||||||| ||||||   ||||    ||||||| |||||  ||||||  
seq2  TGCACACAT-CTCAGG--ACAGC---TCAGTGCT-GACTC--ACGCTG--  1077

seq1  TTTCCCCGTGAGCACTAAATGGATCTTTC  1128
       || |||||| |||||||   ||||||||
seq2  -TTTCCCGTG-GCACTAA--TGATCTTTC  1102