BAC Information

Click to search

BAC

Clone NameB6Ng01-083L08
Chromosome13 (Build37)
Map Location 95,603,303 - 95,604,453
singlet/doubletsinglet
Overlap geneTbca
Upstream geneArsb, Cycs-ps3, Lhfpl2, Scamp1, LOC435378, ENSMUSG00000042857, Ap3b1
Downstream geneOtp, Wdr41, Pde8b, Zbed3, Aggf1, Crhbp, S100z, F2rl1, F2r, Iqgap2, F2rl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083L08.bB6Ng01-083L08.g
ACCDH897893DH897894
length1,1481,158
definitionDH897893|Mus musculus domesticus DNA, BAC clone: B6Ng01-083L08, 5' end.DH897894|Mus musculus domesticus DNA, BAC clone: B6Ng01-083L08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattcattgccttttttctgtgtgtttgttgttttggttgggagg
ggttgctatttgcttggtttgtttcttttaccaggggctctgtatgtagc
cctggctgtcctggaatcccctggttagagcagtctggcctcctgcgtct
gctggaggaagtgctgctgtttacatctgcttctttttctatatttttga
ggtaagcacacttagctttgatgatgtcaacattcagtgcagtgtgtttc
cctctccccattagtaaggtctggctacatttttagcctcagcctcccag
gtgtgaggagcaaaggtgtgccactactgccctgctgagggattacatcg
cagttaggtgctgtgctgagtgtgactgtgggtttagatttgttgtgttt
tcactgtagtttgatctaggatgtgctttgctgcagtgtgtcatagggct
gcaacctctcttgtagtgttctgtttcttggctgatagctttctgtgctg
gtgtttagttctttcccatctttgctcatttttgtctagtatttctataa
attgttgaatgtaagtgtggaaatccccatctgtttacgtgcatttatca
gtttatctgttcagttcatacacagtcatgttaccttgatgtgcttataa
cagtatgataatgtgacacctgttttatccctgacagcatttcttgatct
gcagcagtcagtgttgcaggactcttcgctgtacagtattaatgtcttca
ctgttactcttgttttgtaatgtttccacatcttttttccatccttttat
tttctgtttctttattatgtctgaagtgaccttcttatagagagtatatg
gtcaggtacagtcagtctgtccgggctttacatggaatgtttgcaccatt
tatgtctcatgacacttgtttggggtatcagagtagagtggacaccaccc
cttcctttttccctcagtggattcagaaataatcagacaacacaagtcaa
atgggtccgtagcttaccacattgagtgttggtaacgttctgcaccattt
aagcgaggactagttaatgtttgcagtgaatttctagagttcatctgaca
gcagtatgactgtcatgggccttcgagacagctgactcataggttgtt
gaattctcatctgaggaataccgaatggctgagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctctcaacagtcagaatggctaagatcaggtgacagcagatgct
ggtgaggatgtggagaaagaggaacactcctccattgttggtgggattgc
aagcttgtacaaccactctggaaatcagtctggcagttcctcagaaaatt
ggacatggtactatcggaggatcccacagtacctctcctggccatatatc
cagaagatgttccaactagtaagaaagatacatgctccactatgttcata
gcagccttatttataatagccagaagctggaaagaacccagatgcccctc
aacagaggaatggatacaaaaaatgtggtacatttacacaatggagtact
actcagctattaaaaagaatgaatttatgaaattcctaggcaaatggatg
gatctggagggcattatcctgagtgaagtaactcaatcacaaaagaactc
aaatgatatgtactcactgataagtggatcttagcctagaaacttagaat
acccaagatataagttacaatttgcaaaacacatgaaactcaagaacaat
gaagaccaaagtgtggacactttgccccttcttagaattgggaacaaaat
acccatggaaggagttacagagacacagtttggagctgagacgaaaggat
ggaccatctagagactgccatatccagggatccatcccaaaatcagcctc
caaacgctgacaccattttcatacactagcaagattttgctgaaaggacc
cagatagagctgtctcttgtgtgactatgccagggcctagcaaacacaga
agtggatgctcagggtcagctattggatggagcacagggccccaatggag
gagctagagaaagtaaccaaggagctaaaggatcttgcaccctataggtt
gatcacatatgactaccagtacccccagagctctgtctctagctgcatat
gtagcagagatgctagtcgcatcagtggaagagaggcccaatgtcggcac
tttatctgtctcagttacaggaggccagggcagaaattggaatgtgttgt
gttgggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_95603303_95604453
seq2: B6Ng01-083L08.b_45_1192

seq1  GAATTCATTCATTGCCTTTTTTCTGTGTGTTTGTTGTTTTGGTTGGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCATTGCCTTTTTTCTGTGTGTTTGTTGTTTTGGTTGGGAGG  50

seq1  GGTTGCTATTTGCTTGGTTTGTTTCTTTTACCAGGGGCTCTGTATGTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTATTTGCTTGGTTTGTTTCTTTTACCAGGGGCTCTGTATGTAGC  100

seq1  CCTGGCTGTCCTGGAATCCCCTGGTTAGAGCAGTCTGGCCTCCTGCGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTCCTGGAATCCCCTGGTTAGAGCAGTCTGGCCTCCTGCGTCT  150

seq1  GCTGGAGGAAGTGCTGCTGTTTACATCTGCTTCTTTTTCTATATTTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGGAAGTGCTGCTGTTTACATCTGCTTCTTTTTCTATATTTTTGA  200

seq1  GGTAAGCACACTTAGCTTTGATGATGTCAACATTCAGTGCAGTGTGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGCACACTTAGCTTTGATGATGTCAACATTCAGTGCAGTGTGTTTC  250

seq1  CCTCTCCCCATTAGTAAGGTCTGGCTACATTTTTAGCCTCAGCCTCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCCATTAGTAAGGTCTGGCTACATTTTTAGCCTCAGCCTCCCAG  300

seq1  GTGTGAGGAGCAAAGGTGTGCCACTACTGCCCTGCTGAGGGATTACATCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGGAGCAAAGGTGTGCCACTACTGCCCTGCTGAGGGATTACATCG  350

seq1  CAGTTAGGTGCTGTGCTGAGTGTGACTGTGGGTTTAGATTTGTTGTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAGGTGCTGTGCTGAGTGTGACTGTGGGTTTAGATTTGTTGTGTTT  400

seq1  TCACTGTAGTTTGATCTAGGATGTGCTTTGCTGCAGTGTGTCATAGGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTAGTTTGATCTAGGATGTGCTTTGCTGCAGTGTGTCATAGGGCT  450

seq1  GCAACCTCTCTTGTAGTGTTCTGTTTCTTGGCTGATAGCTTTCTGTGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTCTCTTGTAGTGTTCTGTTTCTTGGCTGATAGCTTTCTGTGCTG  500

seq1  GTGTTTAGTTCTTTCCCATCTTTGCTCATTTTTGTCTAGTATTTCTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTAGTTCTTTCCCATCTTTGCTCATTTTTGTCTAGTATTTCTATAA  550

seq1  ATTGTTGAATGTAAGTGTGGAAATCCCCATCTGTTTACGTGCATTTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGAATGTAAGTGTGGAAATCCCCATCTGTTTACGTGCATTTATCA  600

seq1  GTTTATCTGTTCAGTTCATACACAGTCATGTTACCTTGATGTGCTTATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCTGTTCAGTTCATACACAGTCATGTTACCTTGATGTGCTTATAA  650

seq1  CAGTATGATAATGTGACACCTGTTTTATCCCTGACAGCATTTCTTGATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATGATAATGTGACACCTGTTTTATCCCTGACAGCATTTCTTGATCT  700

seq1  GCAGCAGTCAGTGTTGCAGGACTCTTCGCTGTACAGTATTAATGTCTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGTCAGTGTTGCAGGACTCTTCGCTGTACAGTATTAATGTCTTCA  750

seq1  CTGTTACTCTTGTTTTGTAATGTTTCCACATCTTTTTTCCATCCTTTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACTCTTGTTTTGTAATGTTTCCACATCTTTTTTCCATCCTTTTAT  800

seq1  TTTCTGTTTCTTTATTATGTCTGAAGTGACCTTCTTATAGAGAGTATATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTCTTTATTATGTCTGAAGTGACCTTCTTATAGAGAGTATATG  850

seq1  GTCAGGTACAGTCAGTCTGTCCGGGCTTTACATGGAATGTTTGCACCATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGTACAGTCAGTCTGTCCGGGCTTTACATGGAATGTTTGCACCATT  900

seq1  TATGTCTCATGACACTTGTTTGGGGTATCAGAGTAGAGTGGACACCACCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTCATGACACTTGTTTGGGGTATCAGAGTAGAGTGGACACCACCC  950

seq1  CTCCCTTTTTCCCTCAGTGGATTCAGAAATAATCAGACAAACACAAGTCA  1000
      || ||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTTCCTTTTTCCCTCAGTGGATTCAGAAATAATCAGAC-AACACAAGTCA  999

seq1  AATGGGTCCGTAGCTTACCACATTGAGTG-TGGTAACGTCCTGCACCATT  1049
      ||||||||||||||||||||||||||||| ||||||||| ||||||||||
seq2  AATGGGTCCGTAGCTTACCACATTGAGTGTTGGTAACGTTCTGCACCATT  1049

seq1  TAAGGCGAGGACTAGTCAATG-TTGCAGTG-ATTTCTAGAGTTCCATCTG  1097
      ||| |||||||||||| |||| |||||||| |||||||||||| ||||||
seq2  TAA-GCGAGGACTAGTTAATGTTTGCAGTGAATTTCTAGAGTT-CATCTG  1097

seq1  ACAAGCAAGTATGACTGTCATGGGCTTCAGAGACAGCTGACACTATAGGT  1147
      || ||| |||||||||||||||||| |  |||||||||||| | ||||||
seq2  AC-AGC-AGTATGACTGTCATGGGCCTTCGAGACAGCTGACTC-ATAGGT  1144

seq1  TGTT  1151
      ||||
seq2  TGTT  1148