MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-085L10
Chromosome	13 (Build37)
Map Location	86,170,745 - 86,171,876
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100042857, LOC100042862, Ccnh, Rasa1, LOC435373, LOC675662
Downstream gene	Cox7c, LOC100042887, LOC100042893
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042857 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100042862 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Ccnh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66671 MGI:1913921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rasa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218397 MGI:97860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435373 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435373
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	LOC675662 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675662
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Cox7c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12867 MGI:103226
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042887 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	LOC100042893 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100042862 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264378 GeneID:100042862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Unknown (protein for IMAGE:4910858) transcript_id : XM_001478943.1

name	Ccnh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384405 GeneID:66671 MGI:1913921
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin H transcript_id : NM_023243.3

name	Rasa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130145 GeneID:218397 MGI:97860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS p21 protein activator 1 transcript_id : NM_145452.2

name	Cox7c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93102385 GeneID:12867 MGI:103226
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome c oxidase, subunit VIIc transcript_id : NM_007749.3

name	LOC100042887 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264383 GeneID:100042887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : similar to pol protein transcript_id : XM_001478997.1

name	LOC100042862 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264379 GeneID:100042862
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478993.1

name	Ccnh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963599 CCDS:CCDS26666.1 GeneID:66671 MGI:1913921
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0004693 - cyclin-dependent protein kinase activity [Evidence ISS]; GO:0016301 - kinase activity [Evidence IDA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : cyclin H protein_id : NP_075732.1

name	Rasa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703900 CCDS:CCDS26667.1 GeneID:218397 MGI:97860
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005099 - Ras GTPase activator activity [Evidence ISS] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence ISS]; GO:0007155 - cell adhesion [Evidence ISS]; GO:0009790 - embryonic development [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence ISS]; GO:0007162 - negative regulation of cell adhesion [Evidence ISS]; GO:0001953 - negative regulation of cell-matrix adhesion [Evidence ISS]; GO:0043524 - negative regulation of neuron apoptosis [Evidence IMP]; GO:0045768 - positive regulation of anti-apoptosis [Evidence ISS]; GO:0030833 - regulation of actin filament polymerization [Evidence ISS]; GO:0008360 - regulation of cell shape [Evidence ISS]; GO:0051252 - regulation of RNA metabolism [Evidence ISS]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0001570 - vasculogenesis [Evidence IMP] codon_start : 1 note : p120-rasGAP; GTPase-activating protein product : RAS p21 protein activator 1 protein_id : NP_663427.1

name	Cox7c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680991 CCDS:CCDS26668.1 GeneID:12867 MGI:103226
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : cytochrome c oxidase, subunit VIIc protein_id : NP_031775.1

name	LOC100042887 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264384 GeneID:100042887
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001479047.1

name	LOC100042857 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042857
definition	number : 1 pseudo : _no_value

name	LOC100042857 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042857
definition	number : 2 pseudo : _no_value

name	LOC100042857 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042857
definition	number : 3 pseudo : _no_value

name	LOC100042857 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042857
definition	number : 4 pseudo : _no_value

name	LOC675662 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675662
definition	number : 1 pseudo : _no_value

name	LOC100042893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042893
definition	number : 1 pseudo : _no_value

name	LOC100042893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042893
definition	number : 2 pseudo : _no_value

name	LOC100042893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042893
definition	number : 3 pseudo : _no_value

name	LOC100042893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042893
definition	number : 4 pseudo : _no_value

name	LOC435373 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264382 GeneID:435373
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to high mobility group protein homolog HMG4 pseudo : _no_value transcript_id : XR_034009.1

clone name	MSMg01-530E16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-174L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144B02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-263L09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-298H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539B10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-341P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447A13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-545G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053N01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-433L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019E10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-085L10.b	B6Ng01-085L10.g
ACC	DH899311	DH899312
length	1,215	1,115
definition	DH899311\|Mus musculus domesticus DNA, BAC clone: B6Ng01-085L10, 5' end.	DH899312\|Mus musculus domesticus DNA, BAC clone: B6Ng01-085L10, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctgtgaccaccacagtggcatgcctgtaatatatactagtgcaat aatggcaaaaaaaaaaaaaaaaaaaagaatataaccaaccactttttgat tgactttaagacccactccatgaggtggaatccacatctgacactgatag gtaatgctccttcgagaaaaacctcctgctaatattctgattaatcacct agtagtataacaattcctaatgatatactgctttgtctagtgtatttctt aacccgcaccagagaaagtttgtcttgtatgaggtggtatttaacaaaga ctcacaagtacacaaggtgcagagagtaaaagactcctgagaactcaatc ctgaatgggttattttatctcactctatcttcatgtctcagagatctaag tggatgaagaaactaaaatattataatggccagagattgtagataactac aaggaaaaagaaacttccagacataacagctgatgcaaatacgaagtcac ctgcgtctgtgacagtgttcacatgaactgcacaaacaaaagccagacaa aaccactggcaagaggaagaggaagtgtgagcacaaagttcaaaccctga cccagaacccttttgaattcagcacctgcgaggagaaagaaaatcatttt tctccaacagaatgactggatatataaaccagactccggggtaaaggtca tgctcagtttaacgcaacacaaaacttattccaagatttttaatgtgctt tatttgttggggttttgaggtttttgtctttgatgtttttaagagagaga gagaaacagagatcaagaagttcattgggtaggaagatggggcaatctga gaaaaaaggaaagaatatcatcaaaatatgttgcattttaaaaataaatt ttaaatattaataatatccaaataaatccaagcttatccatataagacta tatacttcatgttggagaaatgtgtcattaggcttctgaaacctcaagcc caccccttagtagatatcctttaaacagctggtagctactagatcatgaa cgaagagatcagatcatatcacatcccatacattttaactacttcagatt aaagaaaagatcggacttattagagattgaattatgtactggaaatgatg tgttcctagggcgtcaaccctcagcctcgaacatctattgcctaatggta cccggcctaggtcag	gttgttactcagactgacttggtaaattggaattggtatcaaaaacaata aaataaatttgacagttttctcttttaggaactaaacaaaggctttcaag gtgtgagtgtgtttaattttattaaaggaaattaaatggagtttgaaaca gcagttgtgaagtctttctaggtacaaagactatcccacttttaaagggg atctgttgctcccttaaggaactcaggttttatgaatgtaagtctctcat ggatgatacatactgaagctttctccatcaatcaataggatgtatcatag cacataagatgagatgacatgacctctatgtcttattcttttcttcttgg tttcagcttgtgaacaggggtccataggggtgtgcctttaatacccaaga atcaatttgccaataaaaataaaggagagaaattctcttcttctatgaaa tgcatttcctccaaaaatgagggaaataaatgaggactgtatatgttgta tagttttaatctattcctgtggtacttcacaagttgtttgtttttcttca cctgtaatttactttgacatctgtggaagactatttgaagcatgactagt tgcaattttctagcactcaatagtgatataattaggggttttgcaggcat tgtagacttaattgacatgtaaacaatatgcttatggatgataagtacag gataatttacatatcaaaaatcaaacataaataagctttttgcttcttaa gtcttctgacagatccttttgatggcttattttttttcttataattatat tatcagtgtaggcttggctcaaaatatgaatatttattttgtccttggta aacactcaagtgatatgttgaaaactaaataaaaagccaatttatacatt tagaagtaaagcaagcaaatgagaaagagttgaatgttttcacgaataga aagttatttgcaaaataaatacttattcttgagggaatgtggattttcca gtgtctcttctcacagtgtagtgcaattccatgtcagaagccagctggag attgaatatctacgtttagagatgcagattcttagatggctgacacattt gacctgattgtcttt
quality values	Open. Hide. 61 49 37 49 61 61 49 49 49 61 59 59 43 38 61 59 43 59 59 61 61 59 61 59 52 59 61 61 59 59 55 50 45 52 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 55 59 59 59 59 30 55 59 55 59 59 43 43 61 61 59 44 55 59 59 55 55 55 59 61 61 61 61 61 61 61 59 59 61 61 59 59 59 52 61 59 59 59 52 55 59 59 59 52 59 61 61 49 59 44 55 59 61 61 59 61 59 44 59 59 61 61 59 61 61 59 59 61 61 61 61 59 59 59 61 59 59 59 59 61 59 59 59 59 61 61 61 39 59 44 59 59 59 61 59 59 59 59 59 59 59 61 59 59 59 59 59 59 59 59 59 59 61 61 59 59 59 59 59 59 52 59 59 61 61 59 59 61 52 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 52 59 59 59 44 55 59 59 55 59 59 59 59 59 59 52 59 59 59 59 61 59 61 59 61 61 59 61 61 59 59 49 59 52 59 52 45 23 59 26 41 52 49 61 61 59 59 59 52 59 59 59 61 59 59 59 59 61 36 59 43 59 59 41 59 59 59 61 61 61 61 61 52 59 45 59 59 59 59 52 59 59 59 59 59 59 59 52 59 52 59 49 59 37 44 45 59 28 59 37 59 52 41 59 61 59 59 44 59 59 59 59 59 59 59 59 36 59 59 59 59 59 59 59 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 59 59 61 59 59 59 59 59 59 61 59 59 61 59 59 59 59 59 23 59 38 59 52 43 59 59 59 52 59 61 59 61 61 61 61 55 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 55 61 61 61 61 61 52 61 52 61 55 55 61 55 55 55 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 47 50 61 61 61 61 61 61 61 55 50 61 61 61 61 61 61 61 55 61 61 61 61 61 52 61 61 61 61 61 53 61 61 61 61 61 61 53 61 53 61 61 61 61 61 53 53 50 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 53 61 53 52 61 61 61 61 61 50 61 61 61 61 61 57 57 53 57 53 57 57 57 42 57 47 47 47 57 50 53 57 39 57 57 50 57 57 57 57 57 53 53 57 57 50 57 53 47 53 47 47 47 57 42 47 47 47 34 36 57 47 35 47 47 53 53 47 47 53 57 46 32 52 53 33 53 53 45 52 57 50 57 50 43 46 30 57 52 28 57 47 47 45 53 57 57 50 37 52 50 52 57 57 57 57 53 50 46 43 24 41 52 42 39 57 37 34 57 50 50 50 57 46 31 33 52 37 52 52 53 52 47 38 37 25 24 53 40 39 34 20 21 47 46 46 36 57 46 30 37 57 20 44 32 37 52 27 50 40 35 33 32 57 52 35 36 38 31 37 33 30 52 36 37 31 57 57 36 36 45 53 36 40 37 33 42 31 41 37 48 21 57 57 57 31 13 17 26 34 15 53 40 53 57 57 48 46 57 41 40 27 41 53 57 57 38 20 57 46 37 32 44 15 9 9 47 51 51 34 30 22 44 32 51 31 30 32 30 32 35 51 46 46 48 29 48 34 48 31 47 29 36 29 48 29 36 28 47 51 29 30 28 34 48 23 23 28 34 35 36 28 48 48 29 25 9 13 24 29 29 30 51 41 30 35 26 33 39 35 29 23 9 31 46 46 40 28 33 28 38 41 33 29 36 29 46 51 51 51 51 29 17 24 27 51 33 17 28 33 28 29 28 34 24 29 31 28 51 46 28 28 24 28 29 16 26 30 28 28 29 51 44 28 28 51 51 51 29 27 28 51 29 28 51 51 29 36 44 38 28 28 33 28 21 24 27 22 25 28 21 22 28 29 20 38 16 19 21 51 19 26 28 20 19 17 31 33 38 11 22 29 19 32 19 31 22 14 20 8 14 34 17 29 10 32 10 15 21 33 20 26 20 18 21 32 17 17 17 13 22 11 5 44 24 23 30 15 24 17 26 19 20 16 8 29 20 20 31 10 25 19 27 17 39 12 19 12 22 30 25 29 20 23 30 11 13 20 34 29 30 9 9 14 12 19 6 9 6 8 9 29 8 21 12 36 14 21 29 7 9 17 24 17 29 29 27 15 16 20 29 25 17 27 17 26 9 22 20 13 23 15 10 12 13 7 4 6 3 3 4 4 10 23 14 11 9 21 22 11 11 6 5 16 20 6 10 7 20 7 22 18 4 12 12 16 6 7 36 36 16 4 7 10 14 12 5 3 13 5 6 11 4 5 16 8 24 9 5 5 2 3 4 12 16 22 10 6 6 7 9 12 5 3 5 5 4 4 8 4 12 8 3 3 7 14 3 6 4 1 3 5 14 11 8 3 3 14 30 8 3 4 4 4 15 6 9 5 7 10 20 4 2 9 1 4 4 5 6 4 20 4 8 4 4 18 4 10 5 4 3 20 4 3 13 6 7 7 9 3 4 17 4 4 3 3 4 3 3 6 9 17 4 1 4 16 21 6 18 14 4 6 8 3 4 3 1 3 4 3	Open. Hide. 30 26 31 44 59 59 61 61 61 59 59 59 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 49 36 28 28 28 49 45 61 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 55 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 55 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 59 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 55 55 53 53 52 53 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 43 52 53 61 61 61 50 61 61 57 53 53 47 57 52 57 47 53 40 57 57 57 57 53 53 57 47 45 53 57 57 57 52 57 47 47 53 53 53 53 57 57 57 57 53 53 52 57 57 53 57 53 53 47 53 57 50 53 30 52 53 53 57 57 53 57 57 47 53 50 53 57 53 47 47 57 52 53 52 53 50 31 45 52 52 57 57 53 53 47 50 52 33 53 57 52 33 52 53 42 53 43 57 53 42 50 52 50 50 42 57 52 57 57 57 41 27 57 57 53 41 42 42 38 52 30 18 31 57 41 29 52 36 52 30 37 53 30 52 35 52 43 50 50 37 41 53 41 52 57 34 38 36 53 34 39 34 38 37 52 43 50 44 53 53 32 33 53 39 24 44 53 42 42 29 53 33 53 53 38 36 47 28 24 53 53 22 39 24 53 27 53 40 37 57 57 57 48 41 33 28 53 30 40 34 40 41 57 28 41 34 33 35 37 33 57 57 57 40 33 34 41 41 33 32 35 37 37 33 32 38 38 30 30 29 28 30 25 23 24 40 25 30 48 32 51 51 43 24 30 24 30 33 26 31 23 32 32 51 51 51 51 46 46 9 13 17 34 44 28 29 29 29 33 32 24 22 27 39 31 28 37 33 33 24 27 10 33 34 35 29 28 19 20 22 29 35 34 28 46 46 43 29 28 14 25 36 29 24 24 28 37 21 9 9 51 46 33 26 21 33 26 21 22 14 32 14 29 51 29 25 28 29 13 20 27 29 28 16 14 29 18 22 29 38 17 27 29 33 51 46 28 27 33 27 41 32 14 7 41 46 39 20 15 27 26 21 21 33 51 29 17 26 15 20 26 8 38 31 27 9 30 31 20 22 46 51 31 14 24 20 26 12 7 13 41 19 28 34 21 16 24 51 25 15 29 15 23 29 22 26 34 17 17 12 51 51 28 26 9 34 14 33 23 19 14 19 34 51 39 13 31 19 25 31 51 29 21 33 28 51 51 23 24 17 51 21 17 12 30 26 25 17 16 24 8 5 25 13 26 22 34 29 8 23 8 8 9 19 25 29 23 44 44 23 19 26 14 7 6 10 8 27 17 17 13 17 30 7 12 9 8 6 10 4 15 8 29 13 12 30 24 16 4 8 17 6 27 20 17 26 10 4 4 7 30 21 8 8 6 5 7 4 10 18 19 10 8 5 19 10 8 33 29 4 10 5 20 6 20 29 5 26 36 23 5 11 6 10 8 7 24 5 3 6 15 11 8 24 5 8 5 12 7 4 10 7 25 10 23 9 6 4 5 4 23 31 24 23 19 24 23 5 2 2 1 4 14 4 9 6 24 17

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_86170745_86171876
seq2: B6Ng01-085L10.g_81_1195

seq1  GTTGTTACTCAGACTGACTTGGTAAATTGGAATTGGTATCAAAAACAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTACTCAGACTGACTTGGTAAATTGGAATTGGTATCAAAAACAATA  50

seq1  AAATAAATTTGACAGTTTTCTCTTTTAGGAACTAAACAAAGGCTTTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATTTGACAGTTTTCTCTTTTAGGAACTAAACAAAGGCTTTCAAG  100

seq1  GTGTGAGTGTGTTTAATTTTATTAAAGGAAATTAAATGGAGTTTGAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGTGTGTTTAATTTTATTAAAGGAAATTAAATGGAGTTTGAAACA  150

seq1  GCAGTTGTGAAGTCTTTCTAGGTACAAAGACTATCCCACTTTTAAAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTGTGAAGTCTTTCTAGGTACAAAGACTATCCCACTTTTAAAGGGG  200

seq1  ATCTGTTGCTCCCTTAAGGAACTCAGGTTTTATGAATGTAAGTCTCTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTGCTCCCTTAAGGAACTCAGGTTTTATGAATGTAAGTCTCTCAT  250

seq1  GGATGATACATACTGAAGCTTTCTCCATCAATCAATAGGATGTATCATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATACATACTGAAGCTTTCTCCATCAATCAATAGGATGTATCATAG  300

seq1  CACATAAGATGAGATGACATGACCTCTATGTCTTATTCTTTTCTTCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAGATGAGATGACATGACCTCTATGTCTTATTCTTTTCTTCTTGG  350

seq1  TTTCAGCTTGTGAACAGGGGTCCATAGGGGTGTGCCTTTAATACCCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCTTGTGAACAGGGGTCCATAGGGGTGTGCCTTTAATACCCAAGA  400

seq1  ATCAATTTGCCAATAAAAATAAAGGAGAGAAATTCTCTTCTTCTATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTTGCCAATAAAAATAAAGGAGAGAAATTCTCTTCTTCTATGAAA  450

seq1  TGCATTTCCTCCAAAAATGAGGGAAATAAATGAGGACTGTATATGTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTCCTCCAAAAATGAGGGAAATAAATGAGGACTGTATATGTTGTA  500

seq1  TAGTTTTAATCTATTCCTGTGGTACTTCACAAGTTGTTTGTTTTTCTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTAATCTATTCCTGTGGTACTTCACAAGTTGTTTGTTTTTCTTCA  550

seq1  CCTGTAATTTACTTTGACATCTGTGGAAGACTATTTGAAGCATGACTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAATTTACTTTGACATCTGTGGAAGACTATTTGAAGCATGACTAGT  600

seq1  TGCAATTTTCTAGCACTCAATAGTGATATAATTAGGGGTTTTGCAGGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTTTCTAGCACTCAATAGTGATATAATTAGGGGTTTTGCAGGCAT  650

seq1  TGTAGACTTAATTGACATGTAAACAATATGCTTATGGATGATAAGTACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACTTAATTGACATGTAAACAATATGCTTATGGATGATAAGTACAG  700

seq1  GATAATTTACATATCAAAAATCAAACATAAATAAGCTTTTTGCTTCTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTTACATATCAAAAATCAAACATAAATAAGCTTTTTGCTTCTTAA  750

seq1  GTCTTCTGACAGATCCTTTTGATGGCTTATTTTTTTTCTTATAATTATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTGACAGATCCTTTTGATGGCTTATTTTTTTTCTTATAATTATAT  800

seq1  TATCAGTGTAGGCTTGGCTCAAAATATGAATATTTATTTTGTCCTTGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTGTAGGCTTGGCTCAAAATATGAATATTTATTTTGTCCTTGGTA  850

seq1  AACACTCAAGTGATATGTTGAAAACTAAATAAAAAGCCAATTTATACAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AACACTCAAGTGATATGTTGAAAACTAAATAAAAAGCCAATTTATAC-AT  899

seq1  TTAGAAGTAAAAGCAAGCAAATGAGAAAGAGTTGAATGTTTTCACGAATA  950
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGT-AAAGCAAGCAAATGAGAAAGAGTTGAATGTTTTCACGAATA  948

seq1  GAAAAGTTATTTGCAAAATAAATACTTATTCTTGAGGGGAATGTGGATTT  1000
      | ||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  G-AAAGTTATTTGCAAAATAAATACTTATTCTTGA-GGGAATGTGGATTT  996

seq1  TCCAGTGTCTCTTCCTCACAGTGTAGTGCAATTCCATGTCAGAAGCCAGG  1050
      ||||||||||||| |||||||||||||||||||||||||||||||||| |
seq2  TCCAGTGTCTCTT-CTCACAGTGTAGTGCAATTCCATGTCAGAAGCCA-G  1044

seq1  CTGGAGTTGAAATATCCTACGTTTTTAGAGGATGCAGATCCTTAGGAATG  1100
      |||||| |  ||||| |||||  |||||| ||||||||| |||||  |||
seq2  CTGGAGATTGAATAT-CTACG--TTTAGA-GATGCAGATTCTTAG--ATG  1088

seq1  CCTGGACACATTTTGACCCTGTTTTTGTCTTT  1132
       || |||||| |||||||   |  ||||||||
seq2  GCT-GACACA-TTTGACC---TGATTGTCTTT  1115

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information