BAC Information

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BAC

Clone NameB6Ng01-089A17
Chromosome13 (Build37)
Map Location 67,495,731 - 67,628,729
singlet/doubletdoublet
Overlap gene2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87
Upstream gene2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456
Downstream geneZfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089A17.bB6Ng01-089A17.g
ACCDH901733DH901734
length1,114818
definitionDH901733|Mus musculus domesticus DNA, BAC clone: B6Ng01-089A17, 5' end.DH901734|Mus musculus domesticus DNA, BAC clone: B6Ng01-089A17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,495,731 - 67,496,623)(67,627,916 - 67,628,729)
sequence
gaattcaaatgtaattcattcatagagacaatactgaagtaagtgactaa
taccaatgttccattatacagtcctctgtacatgtcaaagtttagcctaa
aacagggagctcaaacaaatttatagtcaccttaaagtttactcagtatg
gcataatattcaaaatccggtgtggtttataaactggttaatgaaactga
acgcttgagtgaagaaggctaacataccactgagcttgcatgacagaaca
catccagggtagaagaacacgattactattagcacactgtccaatgggac
acagacctatcagaggaaatgcatgctagcctcatcataggataaggaag
catggggaacaggacttgccagcatctgctgcgcctgtctccctctgacc
tgtaagccagactaggaactcctactcctaatctgcagggaagatggatt
actcctcctgtctcacaaggcaggggatggatcctctcatgctgaggagg
atcttggactcagcaccacagtctagatgtctcaaatgcaagcactcaat
gcaattaccctgcacacagtgtctctttatatgaaaactgaggatactgt
gtacagaggaacctcctaccaacactgccacccgaatggtatgggaacta
catgcaagttcaaatggccctgccctgtccgttgctttcatttctcctcc
ccctaccaaagctaatccctgccctggagctgagtctgattctataagca
gtcctcagcagactgtgagacaatattcgacagatgctacataagatcag
tgagaaatgaaatgtccaaggggactcctgtttgtctgaatttatccaac
tgcttcccagcccaatttgtcctaatcaacagaatggaaattgatgagct
ccctgcttctgcctgcctctgtggtcatgggaacgtatcattgatttttt
ttttttttttgagacagggtttctctgtataggcttggctgtctggaact
cactctgtagaacaggctggcctcgaactcagaaatcggctgctctggct
ccggagtgctgggattaaaggcgtggttgccacaacgccggcggtatcat
gaatttattaacca
gaattcatctgaaaggagaaagtccagtgggaaaatagcatttaaggaga
gcttgacctctgtttacttttttttccccatggtctcccttgagcttgtt
atttctctaaggtctcaaggacaggcacctggagttctgcagttcctcag
caggagtgttggtttttagagacacaaaggcagggaggatgtctcctcag
aatgtcctcattaagggggagttttatgggtagtgccattctaatgctag
aggtggggggagggagtttcaggctgctgcaggaggacacagcacagaaa
ccagctgtctgtgtagcatacttgtctagggctagagggaagatgggagc
ttctggccaggggggtggggggtgggagcaaaaaatgcagagacaaactg
tgcacaacactaaagtatctctctagtatcagcaattcggaggttacaac
acatgcttaatcactgcaaggagaactaagtaggaaaagagaagttgagt
tctccacagtgataaaaataccatggatagtggtagcacatgcctttaat
ccccgcacttgggaagcagaatcagggggatctttgagtccaatgcaaag
cctggtctacagagcaagataccccatgcctaatgcagagagaaattcta
caatgggatgatggaccagaagtccgtacaatgcttaagaactgtgccct
ccttgggagagaagcagaaagagatactcacaggctcagagaccacctgc
tgttaaacacttctctgtttgtggtgaaccagggagacgtgggtgagttc
tgggtatagtcctcataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67495731_67496623
seq2: B6Ng01-089A17.b_263_1154

seq1  CATACCACTGAGCTTGCATGACAGAACACATCCAGGGTAGAAGAACACGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCACTGAGCTTGCATGACAGAACACATCCAGGGTAGAAGAACACGA  50

seq1  TTACTATTAGCACACTGTCCAATGGGACACAGACCTATCAGAGGAAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATTAGCACACTGTCCAATGGGACACAGACCTATCAGAGGAAATGC  100

seq1  ATGCTAGCCTCATCATAGGATAAGGAAGCATGGGGAACAGGACTTGCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGCCTCATCATAGGATAAGGAAGCATGGGGAACAGGACTTGCCAG  150

seq1  CATCTGCTGCGCCTGTCTCCCTCTGACCTGTAAGCCAGACTAGGAACTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCTGCGCCTGTCTCCCTCTGACCTGTAAGCCAGACTAGGAACTCC  200

seq1  TACTCCTAATCTGCAGGGAAGATGGATTACTCCTCCTGTCTCACAAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCTAATCTGCAGGGAAGATGGATTACTCCTCCTGTCTCACAAGGCA  250

seq1  GGGGATGGATCCTCTCATGCTGAGGAGGATCTTGGACTCAGCACCACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGGATCCTCTCATGCTGAGGAGGATCTTGGACTCAGCACCACAGT  300

seq1  CTAGATGTCTCAAATGCAAGCACTCAATGCAATTACCCTGCACACAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATGTCTCAAATGCAAGCACTCAATGCAATTACCCTGCACACAGTGT  350

seq1  CTCTTTATATGAAAACTGAGGATACTGTGTACAGAGGAACCTCCTACCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATATGAAAACTGAGGATACTGTGTACAGAGGAACCTCCTACCAA  400

seq1  CACTGCCACCCGAATGGTATGGGAACTACATGCAAGTTCAAATGGCCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCACCCGAATGGTATGGGAACTACATGCAAGTTCAAATGGCCCTG  450

seq1  CCCTGTCCGTTGCTTTCATTTCTCCTCCCCCTACCAAAGCTAATCCCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCCGTTGCTTTCATTTCTCCTCCCCCTACCAAAGCTAATCCCTGC  500

seq1  CCTGGAGCTGAGTCTGATTCTATAAGCAGTCCTCAGCAGACTGTGAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGCTGAGTCTGATTCTATAAGCAGTCCTCAGCAGACTGTGAGACA  550

seq1  ATATTCGACAGATGCTACATAAGATCAGTGAGAAATGAAATGTCCAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATATTCGACAGATGCTACATAAGATCAGTGAGAAATGAAATGTCCAAGGG  600

seq1  GACTCCTGTTAGTCTGAATTTATCCAACTGCTTCCCAGCCCAATTTGTCC  650
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTGTTTGTCTGAATTTATCCAACTGCTTCCCAGCCCAATTTGTCC  650

seq1  TAATCAACAGAATGGAAATTGATGAGCTCCCTGCTTCTGCCTGCCTCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAACAGAATGGAAATTGATGAGCTCCCTGCTTCTGCCTGCCTCTGT  700

seq1  -GTCATGGGAACGTATCATTGA-TTTTTTTTTTTTTTTGAGACAGGGTTT  748
       ||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGTCATGGGAACGTATCATTGATTTTTTTTTTTTTTTTGAGACAGGGTTT  750

seq1  CTCTGTATAGCCTTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGC  798
      |||||||||| ||||||||| ||||||||||||||||||| |||||||||
seq2  CTCTGTATAGGCTTGGCTGT-CTGGAACTCACTCTGTAGAACAGGCTGGC  799

seq1  CTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAA  848
      ||||||||||||||| || ||| ||||| |||| ||||||||||||||||
seq2  CTCGAACTCAGAAAT-CGGCTG-CTCTGGCTCCGGAGTGCTGGGATTAAA  847

seq1  GGCGTG--TGCCACAACGCCCGGCCGTATCATTGATTTTATTAACCA  893
      ||||||  |||||||||| ||||| |||||| ||| |||||||||||
seq2  GGCGTGGTTGCCACAACG-CCGGCGGTATCA-TGAATTTATTAACCA  892

seq1: chr13_67627916_67628729
seq2: B6Ng01-089A17.g_68_885 (reverse)

seq1  TTATGAGAACTATA-CCAGAACATCACCCACGTCTCCCTGGTTCACCACA  49
      ||||||| |||||| ||||||| |||||||||||||||||||||||||||
seq2  TTATGAGGACTATACCCAGAAC-TCACCCACGTCTCCCTGGTTCACCACA  49

seq1  AACAGAGAAGTGTTTAACAGCAGGTGGTCTCTGAGCCTGTGAGTATCTC-  98
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AACAGAGAAGTGTTTAACAGCAGGTGGTCTCTGAGCCTGTGAGTATCTCT  99

seq1  TTCTGCTTCTCTCCCAAGGAGGGCACAGTTCTT-AGCATTGTACGGACTT  147
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCTGCTTCTCTCCCAAGGAGGGCACAGTTCTTAAGCATTGTACGGACTT  149

seq1  CTGGTCCATCAT-CCATTGTAGAATTTCTCTCTGCATTAGGCATGGGGTA  196
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTGGTCCATCATCCCATTGTAGAATTTCTCTCTGCATTAGGCATGGGGTA  199

seq1  TCTTGCTCTGTAGACCAGGC-TTGCATTGGACTCAAAGATCCCCCTGATT  245
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCTTGCTCTGTAGACCAGGCTTTGCATTGGACTCAAAGATCCCCCTGATT  249

seq1  CTGCTTCCCAAGTGCGGGGATTAAAGGCATGTGCTACCACTATCCATGGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCCAAGTGCGGGGATTAAAGGCATGTGCTACCACTATCCATGGT  299

seq1  ATTTTTATCACTGTGGAGAACTCAACTTCTCTTTTCCTACTTAGTTCTCC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATCACTGTGGAGAACTCAACTTCTCTTTTCCTACTTAGTTCTCC  349

seq1  TTGCAGTGATTAAGCATGTGTTGTAACCTCCGAATTGCTGATACTAGAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTGATTAAGCATGTGTTGTAACCTCCGAATTGCTGATACTAGAGA  399

seq1  GATACTTTAGTGTTGTGCACAGTTTGTCTCTGCATTTTTTGCTCCCACCC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTTAGTGTTGTGCACAGTTTGTCTCTGCATTTTTTGCTCCCACCC  449

seq1  CCCACCCCCCTGGCCAGAAGCTCCCATCTTCCCTCTAGCCCTAGACAAGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCCCTGGCCAGAAGCTCCCATCTTCCCTCTAGCCCTAGACAAGT  499

seq1  ATGCTACACAGACAGCTGGTTTCTGTGCTGTGTCCTCCTGCAGCAGCCTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTACACAGACAGCTGGTTTCTGTGCTGTGTCCTCCTGCAGCAGCCTG  549

seq1  AAACTCCCTCCCCCCACCTCTAGCATTAGAATGGCACTACCCATAAAACT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCCTCCCCCCACCTCTAGCATTAGAATGGCACTACCCATAAAACT  599

seq1  CCCCCTTAATGAGGACATTCTGAGGAGACATCCTCCCTGCCTTTGTGTCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTAATGAGGACATTCTGAGGAGACATCCTCCCTGCCTTTGTGTCT  649

seq1  CTAAAAACCAACACTCCTGCTGAGGAACTGCAGAACTCCAGGTGCCTGTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAACCAACACTCCTGCTGAGGAACTGCAGAACTCCAGGTGCCTGTC  699

seq1  CTTGAGACCTTAGAGAAATAACAAGCTCAAGGGAGACCATGGGGAAAAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGACCTTAGAGAAATAACAAGCTCAAGGGAGACCATGGGGAAAAAA  749

seq1  AAGTAAACAGAGGTCAAGCTCTCCTTAAATGCTATTTTCCCACTGGACTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAACAGAGGTCAAGCTCTCCTTAAATGCTATTTTCCCACTGGACTT  799

seq1  TCTCCTTTCAGATGAATTC  814
      |||||||||||||||||||
seq2  TCTCCTTTCAGATGAATTC  818