BAC Information

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BAC

Clone NameB6Ng01-090C05
Chromosome13 (Build37)
Map Location 28,613,655 - 28,614,002
singlet/doubletsinglet
Overlap genenone
Upstream genePrl8a9, Prl8a1, Prl7b1, Prl7a1, Prl7a2, RP23-135A24.2-001, Prl7d1, Prl7c1, Prl2a1, OTTMUSG00000000651, LOC666321, LOC195243, LOC100041036, Prl4a1, Prl5a1, LOC100042388, LOC100042393, LOC100042399, Ppia-ps13_297.1
Downstream geneLOC626683, 2610307P16Rik, Sox4, LOC100041135, Cdkal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090C05.bB6Ng01-090C05.g
ACCDH902520DH902521
length3481,231
definitionDH902520|Mus musculus domesticus DNA, BAC clone: B6Ng01-090C05, 5' end.DH902521|Mus musculus domesticus DNA, BAC clone: B6Ng01-090C05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
agttgaattttccatgatctcaagggaaatggttttcccattgttaatca
cagatatcctcaactgcagtgaggactgtaactaacaaggatcaactggg
tagagttcacttatattttcatgtatgtttagatttgggtggtgtgtatg
catatatgaatgtatgttcatgagtgagtatgaatgtgtgcgtgcgtgcg
tgtgtgtgtgtgtgtgtgtgtgtgtgtatccatatccagctttatagctc
ctggagatttgaactctggtcttcatgcttctatagcaataattcttcat
ttttaatcactgaggcatctttcctatcccaaatttacttatttcttt
gaattcaatgtgtaccttgagcttcagtaatgtttgttttacaaatgtgg
gtgcccttgcatttggggcatggatgttcagaattgaaagttcatcttgg
tgaatttttcctttgatgagtatgtagtgtccttccccatattttttttt
ataagttttggttgaaagtctactttattagatattagaatctactccag
cttgtttcttgagaccatttgcttggaaattttttctagcctttcacttt
gaggtagtgtctgtctttgtcactgaggtgtgtttcctgtatgcagcaaa
atgctgggtcctatttacatatcgagtctgttagcctatgtctttttatt
ggggaattgagtccattgatgttgagagatattaggaaccaatgattgtt
ctttctgttatttttgtttttagagatgaaattctgtttgtgtggttttc
ttcttttgggtgtgttgtaaaaagattaatttctttgtttttcttgagtg
tagtttcccttgttgtgttggagttttccttctattatcctctgtagggc
tggattagtggaaataacttgtttaaatttggttttgtcttataatatct
tagtttctacatctatggtaactgagaattttttctgggtacagtagact
ggtctggcatttgcgttttcttagggtttgtatgacatctgcccaagatt
gtctggcttttagagtctctgttgagaagccttgtgtaattcttataggt
ctgcctttatatgtaacttgaccttttttccttaccactttcaatattct
ttctttgttctgtgcacttgatgttttgactattatgtgatgggagattt
cttttctggtcccatctgtttggtaggtttcttgtaaatttatgggtatc
tcattcttttgtttagggaagttttcttctataattttgttgaagttgtt
gctggctctttagttgggaatcttcactctcttctatacctatattctta
gtcagctctttcttctttcttcatctcttcttcttcttctcgtgcttcgt
cctactcgttctctgtagaattttcttattacattcatgttaactctttc
tagtttcctctcgaactcatgcccccttccttcctgtcacacccaccact
tctattctgcctgaatgcccatatggtattaccttacggaacaaggctct
ctcttcgacttagtgacgcgcagagaggcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_28613655_28614002
seq2: B6Ng01-090C05.b_54_401 (reverse)

seq1  AAAGATATAAGTAAATTTGGGATAGGAAAGATGCCTCAGTGATTAAAAAT  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATAAGTAAATTTGGGATAGGAAAGATGCCTCAGTGATTAAAAAT  50

seq1  GAAGAATTATTGCTATAGAAGCATGAAGACCTGAGTTCAAATCTCCAGGA  100
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAAGAATTATTGCTATAGAAGCATGAAGACCAGAGTTCAAATCTCCAGGA  100

seq1  GCTATAAAGCTGGATATGGATACACACACACACACACACACACACACACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAAAGCTGGATATGGATACACACACACACACACACACACACACACG  150

seq1  CACGCACGCACACATTCATACTCACTCATGAACATACATTCATATATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCACGCACACATTCATACTCACTCATGAACATACATTCATATATGCA  200

seq1  TACACACCACCCAAATCTAAACATACATGAAAATATAAGTGAACTCTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACCACCCAAATCTAAACATACATGAAAATATAAGTGAACTCTACC  250

seq1  CAGTTGATCCTTGTTAGTTACAGTCCTCACTGCAGTTGAGGATATCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGATCCTTGTTAGTTACAGTCCTCACTGCAGTTGAGGATATCTGTG  300

seq1  ATTAACAATGGGAAAACCATTTCCCTTGAGATCATGGAAAATTCAACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACAATGGGAAAACCATTTCCCTTGAGATCATGGAAAATTCAACT  348