BAC Information

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BAC

Clone NameB6Ng01-092I15
Chromosome13 (Build37)
Map Location 40,232,049 - 40,382,349
singlet/doubletdoublet
Overlap geneOfcc1
Upstream geneEG666867, LOC100041779, LOC382747, A230103O09Rik
Downstream geneLOC666894, LOC100039048, Tcfap2a, EG621629, EG637157, LOC100039105, Gcnt2, Pak1ip1, Tmem14c, Mak, EG621771, Gcm2, LOC637277, Elovl2, LOC268650, BC024659
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092I15.bB6Ng01-092I15.g
ACCDH904276DH904277
length727670
definitionDH904276|Mus musculus domesticus DNA, BAC clone: B6Ng01-092I15, 5' end.DH904277|Mus musculus domesticus DNA, BAC clone: B6Ng01-092I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,381,623 - 40,382,349)(40,232,049 - 40,232,716)
sequence
gaattcattttcctcaaatttgacaatgagttggataaatgcatgaacct
ctacctagacgaaattctatcgtcaaatacttgcattttgttttattttt
ctcagtaagccaaatttttaaagtcaccttatgccgagtacccaaggttt
gcgttcagacatgtgtcgtcctaatttccagttattttcaaaaattagtt
ctgcctcttctgaaacaggtttaaaaaattgaaagttactttctttcgtt
gctaatttttataagcaaacatcttcataactgttttataggtctgatag
cttggagatcattcggccaagcctcagttctaagttctacggcattgcaa
ggtttccttaaagggtatataatgttgctcttaaaaatgtgtacgaactc
aatctagggactctgacacaagaagatggagaggttgttatcagatcagt
cacaacagaataaaaaccataagctcccctccctcgtagccttagcccct
ccccctccccccccccccaccatgatattctcattagttctcactactgt
tgttccccacctgatctgacacgaagtgctcagagcagacaggtgcaaat
tgcaagcttttcactgtggctgtttttctttaaattgacaaagtaataga
gcccagggaacaaaacaggttcacagggaggaaagtctaaacagggacag
ggcagctggctggggggaggtgggggt
gaattccatggctgtgtttaaacggccaaatgagtggttatttatgtaat
taactaaatggacattatacgctttctccccaaagtccctggtttcagag
gaaaaaaaaaattaaattaaagcgtcctagtggacaatgtcttttttgac
ctaaaataaaatgagacttctccttttctgtaggggaaaattgtaagaca
acccatcaacaccagtagttgtctgaagccatgggtgcaaccaaattctg
tatattatgtttttcctttacatacttacccatggtcaagttaaatgcat
atattaagaacagcaaggcattaaaaactgtctaatagcagagtagacca
attataggaagatactatagtaaagatacggggcaggggggtgggggaga
tagcctttatttccaaatatcttataggaccttaagctcattcttctgat
ggtaatgccagactgtgcaatgctaatgtgacaagacagcagaggtgaca
ggcaccacatgtactcttaggccagtgtgcaaagattacttgaacataca
ccctgtgatcctgtgacaatcaatctggtgactgagcttgcaaagtaact
aagaaagggtggtactcttaggttggaaatgacaatccaagcaatgattc
atagcttgggctggacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_40381623_40382349
seq2: B6Ng01-092I15.b_43_769 (reverse)

seq1  ACCCCCACCTCCCCCCAGCCAGCTGCCCTGTCCCTGTTTAGACTTTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACCTCCCCCCAGCCAGCTGCCCTGTCCCTGTTTAGACTTTCCTC  50

seq1  CCTGTGAACCTGTTTTGTTCCCTGGGCTCTATTACTTTGTCAATTTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAACCTGTTTTGTTCCCTGGGCTCTATTACTTTGTCAATTTAAAG  100

seq1  AAAAACAGCCACAGTGAAAAGCTTGCAATTTGCACCTGTCTGCTCTGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGCCACAGTGAAAAGCTTGCAATTTGCACCTGTCTGCTCTGAGC  150

seq1  ACTTCGTGTCAGATCAGGTGGGGAACAACAGTAGTGAGAACTAATGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCGTGTCAGATCAGGTGGGGAACAACAGTAGTGAGAACTAATGAGAA  200

seq1  TATCATGGTGGGGGGGGGGGGAGGGGGAGGGGCTAAGGCTACGAGGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGGTGGGGGGGGGGGGAGGGGGAGGGGCTAAGGCTACGAGGGAGG  250

seq1  GGAGCTTATGGTTTTTATTCTGTTGTGACTGATCTGATAACAACCTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTTATGGTTTTTATTCTGTTGTGACTGATCTGATAACAACCTCTCC  300

seq1  ATCTTCTTGTGTCAGAGTCCCTAGATTGAGTTCGTACACATTTTTAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTTGTGTCAGAGTCCCTAGATTGAGTTCGTACACATTTTTAAGAG  350

seq1  CAACATTATATACCCTTTAAGGAAACCTTGCAATGCCGTAGAACTTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTATATACCCTTTAAGGAAACCTTGCAATGCCGTAGAACTTAGAA  400

seq1  CTGAGGCTTGGCCGAATGATCTCCAAGCTATCAGACCTATAAAACAGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCTTGGCCGAATGATCTCCAAGCTATCAGACCTATAAAACAGTTA  450

seq1  TGAAGATGTTTGCTTATAAAAATTAGCAACGAAAGAAAGTAACTTTCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGTTTGCTTATAAAAATTAGCAACGAAAGAAAGTAACTTTCAAT  500

seq1  TTTTTAAACCTGTTTCAGAAGAGGCAGAACTAATTTTTGAAAATAACTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAACCTGTTTCAGAAGAGGCAGAACTAATTTTTGAAAATAACTGG  550

seq1  AAATTAGGACGACACATGTCTGAACGCAAACCTTGGGTACTCGGCATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGGACGACACATGTCTGAACGCAAACCTTGGGTACTCGGCATAAG  600

seq1  GTGACTTTAAAAATTTGGCTTACTGAGAAAAATAAAACAAAATGCAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTTAAAAATTTGGCTTACTGAGAAAAATAAAACAAAATGCAAGTA  650

seq1  TTTGACGATAGAATTTCGTCTAGGTAGAGGTTCATGCATTTATCCAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACGATAGAATTTCGTCTAGGTAGAGGTTCATGCATTTATCCAACTC  700

seq1  ATTGTCAAATTTGAGGAAAATGAATTC  727
      |||||||||||||||||||||||||||
seq2  ATTGTCAAATTTGAGGAAAATGAATTC  727

seq1: chr13_40232049_40232716
seq2: B6Ng01-092I15.g_69_736

seq1  GAATTCCATGGCTGTGTTTAAACGGCCAAATGAGTGGTTATTTATGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGCTGTGTTTAAACGGCCAAATGAGTGGTTATTTATGTAAT  50

seq1  TAACTAAATGGACATTATACGCTTTCTCCCCAAAGTCCCTGGTTTCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAATGGACATTATACGCTTTCTCCCCAAAGTCCCTGGTTTCAGAG  100

seq1  GAAAAAAAAAATTAAATTAAAGCGTCCTAGTGGACAATGTCTTTTTTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAAATTAAATTAAAGCGTCCTAGTGGACAATGTCTTTTTTGAC  150

seq1  CTAAAATAAAATGAGACTTCTCCTTTTCTGTAGGGGAAAATTGTAAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATAAAATGAGACTTCTCCTTTTCTGTAGGGGAAAATTGTAAGACA  200

seq1  ACCCATCAACACCAGTAGTTGTCTGAAGCCATGGGTGCAACCAAATTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCAACACCAGTAGTTGTCTGAAGCCATGGGTGCAACCAAATTCTG  250

seq1  TATATTATGTTTTTCCTTTACATACTTACCCATGGTCAAGTTAAATGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTATGTTTTTCCTTTACATACTTACCCATGGTCAAGTTAAATGCAT  300

seq1  ATATTAAGAACAGCAAGGCATTAAAAACTGTCTAATAGCAGAGTAGACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAGAACAGCAAGGCATTAAAAACTGTCTAATAGCAGAGTAGACCA  350

seq1  ATTATAGGAAGATACTATAGTAAAGATACGGGGCAGGGGGGTGGGGGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGGAAGATACTATAGTAAAGATACGGGGCAGGGGGGTGGGGGAGA  400

seq1  TAGCCTTTATTTCCAAATATCTTATAGGACCTTAAGCTCATTCTTCTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTTATTTCCAAATATCTTATAGGACCTTAAGCTCATTCTTCTGAT  450

seq1  GGTAATGCCAGACTGTGCAATGCTAATGTGACAAGACAGCAGAGGTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGCCAGACTGTGCAATGCTAATGTGACAAGACAGCAGAGGTGACA  500

seq1  GGCACCACATGTACTCTTAGGCCAGTGTGCAAAGATTACTTGAACATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCACATGTACTCTTAGGCCAGTGTGCAAAGATTACTTGAACATACA  550

seq1  CCCTGTGATCCTGTGACAATCAATCTGGTGACTGAGCTTGCAAAGTAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGATCCTGTGACAATCAATCTGGTGACTGAGCTTGCAAAGTAACT  600

seq1  AAGAAAGGGTGGTACTCTTAGGTTGGAAATGACAATCCAAGCAATGATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGGGTGGTACTCTTAGGTTGGAAATGACAATCCAAGCAATGATTC  650

seq1  ATAGCTTGGGCTGGACAC  668
      ||||||||||||||||||
seq2  ATAGCTTGGGCTGGACAC  668