BAC Information

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BAC

Clone NameB6Ng01-092I22
Chromosome13 (Build37)
Map Location 88,942,667 - 88,943,693
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667230, EG435375
Downstream geneEdil3, Hapln1, EG667266, Vcan, LOC100042940
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092I22.bB6Ng01-092I22.g
ACCDH904288DH904289
length1,2221,025
definitionDH904288|Mus musculus domesticus DNA, BAC clone: B6Ng01-092I22, 5' end.DH904289|Mus musculus domesticus DNA, BAC clone: B6Ng01-092I22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatgttctaggagataacagattaattgatttaggggcaagatc
ctacccagctaattttacatccaagcatgatggtacacaccttccaggac
aaagccaaacagatctctgagttcaaggccagtcttggacaaagcagctc
ctaggtgaagaaatgctttaatccagacatggtatgcacacctttaattc
gagcattacaggagacagagccatgcagatctgagttcaaggtcaatcta
catagcaatttccaggaaagccaagctaaggcagagaaggaattggcaaa
cagaaagatggtaatagaataaaggtagccatattccagccccagcaagc
agccgaacatggcaactgcagccatgtggctctggatttagagtgaaaaa
tagaaggaactactggactaattgatgctagttagctggtgcaaaaaaaa
aaaatagtggtgattaagagatcagcatcactaaattgaaatcttctggg
atgtgttttctgagagcacaaagaagctgtgttccagagatagccaaggt
tgtatttcatgcttcagctgtacttggtaatgtgtaagagtcatccaggt
ggtactggttttgaaggaataaaggagtcacaaagagtagctgaggcttt
gcactgtgagaggccagggaaggccattggtgaaggagcagtttcacttg
tagttgatgattcaagactgaaggggtcatgcaaaggatttgaggcttgg
catcatgaagagagcctatgagaagatattggtgaagcctaattgcagca
gaagaccccagtgttttggagatgccagtaccataggatgatcaccaaga
actagagtagcagtggagtggtatcaaccagaacctagagtactacagag
ggcagagctggagaagtgacaccggccttttggaggagagcagatcatca
gtttggatcctagatattaaaggagaactgtaacattgaaattgccttga
gaccctagatgttgacgatgcaagcctcagagccatgggataactgccat
ggatgctgctaccggggagtgatcgtcagaaaaatagtttaggctgtcac
aagaatgaaaaagcattggaatcgaaactgctttgaactcgactgaatgc
tgatggaataacactggtcgctgatcgcataagtcagatgtaatcacgaa
tcgcacatgcgactcctgcgac
gaattccagtgatatgtccttgatgcttggatggctttctcagctgtttg
aggcatctttgtccctacaagtaattccagttcatgctcttgaaattaac
ttcaataaactcattggttcccccatatagtttttagtagaattgtttat
tggttagttatttgtgctctacatgatgtgagtaggtgttctgctcatat
aaccccaggaaaaattacaaaatagacgggtaagtgcaaatgaaaccaag
agaattggcattaaggtaaatctgtgtttcttaagagtggtaatgaacct
atacaaccaacatgaattctttgagaagaaatgagtcctttgcttagtag
tttgagaaatgaattgtaagcatttaggaaacaaattagaataagtgcct
gatggtagaaatacttgcttagggtaaagctggagtagtatatcaaagct
gtctggaagagttgaagccatccagatgttattctgcaagaaaggaccta
taattgtattaatattttgtttttaatcactagtgcttgtgaaaatgcta
gtgtacatatagttattgattgattagtgaaatgatggtactccaagaaa
attgaatccatgtcaattttcattcattatgggaaaacatgcatttgata
tgacaaataaccaaaatttcattgcaaattaatacatctacaaatagctc
aagtaccttaggttttagagagcagaaagattgtaagagccagaggatca
gagaattttgctgggaaaatgtgtctcttagcaatgtcaatagctacact
caggaagtctcaacaacatgactacctaaaatgagctgaacaaggaaaat
agacagatcaaagtatatgaaggacacaccagaaggcctttatctcacac
aagagctacaggcattaaggatgccaagaatcagggtaaatagttcccaa
gggaagatcacacctatataatccatcaacaatggtcggcttaggaaaca
gatcatcaaataacatcatatttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_88942667_88943693
seq2: B6Ng01-092I22.g_68_1092 (reverse)

seq1  TTAAATATAATGTTATTTGTATG-TCTGTTTCCTAAGCTGACCATTTGTT  49
      |||||||| |||||||||| ||| |||||||||||||| ||||| |||||
seq2  TTAAATATGATGTTATTTG-ATGATCTGTTTCCTAAGCCGACCA-TTGTT  48

seq1  GATGGATTTATAATTGGTGTGATCTTCCCTGGGGAACTATTTACCCT-AC  98
      |||||| |||| || ||||||||||||||| |||||||||||||||| | 
seq2  GATGGA-TTAT-ATAGGTGTGATCTTCCCTTGGGAACTATTTACCCTGAT  96

seq1  TCTTAGCATCCTTAATTGCCTGTAGCTCTTTGTGTGAGGTTAAGGCCTTC  148
      |||| |||||||||| |||||||||||| ||||||||| | |||||||||
seq2  TCTTGGCATCCTTAA-TGCCTGTAGCTC-TTGTGTGAGATAAAGGCCTTC  144

seq1  TGGTGTGTCCTTCATCTACTTTGATCTGTCTATTTTCCTTGTTCAGCTCA  198
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGGTGTGTCCTTCATATACTTTGATCTGTCTATTTTCCTTGTTCAGCTCA  194

seq1  TTTTTAGGTAGTCATGTTGTTGAGACTTCCTGAGTGTAGCTATTGACATT  248
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTTAGGTAGTCATGTTGTTGAGACTTCCTGAGTGTAGCTATTGACATT  243

seq1  GCTAAGAGACACATTTTCCCAGC-AAATTCTCTGATCCTCTGGCTCTTAC  297
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GCTAAGAGACACATTTTCCCAGCAAAATTCTCTGATCCTCTGGCTCTTAC  293

seq1  AATCTTTCTGCTCTCT-AAACCTAAGGTACTTGAGCTATTTTGTAGATGT  346
      |||||||||||||||| ||||||||||||||||||||| |||||||||||
seq2  AATCTTTCTGCTCTCTAAAACCTAAGGTACTTGAGCTA-TTTGTAGATGT  342

seq1  ATTAATTTGCAATG-AATTTTGGTTATTTGTCATATC-AATGCATGTTTT  394
      |||||||||||||| |||||||||||||||||||||| ||||||||||||
seq2  ATTAATTTGCAATGAAATTTTGGTTATTTGTCATATCAAATGCATGTTTT  392

seq1  CCCATAATGAATGAAAATTGACATGGATTCAATTTTCTTGGAGTACCATC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAATGAATGAAAATTGACATGGATTCAATTTTCTTGGAGTACCATC  442

seq1  ATTTCACTAATCAATCAATAACTATATGTACACTAGCATTTTCACAAGCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACTAATCAATCAATAACTATATGTACACTAGCATTTTCACAAGCA  492

seq1  CTAGTGATTAAAAACAAAATATTAATACAATTATAGGTCCTTTCTTGCAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGATTAAAAACAAAATATTAATACAATTATAGGTCCTTTCTTGCAG  542

seq1  AATAACATCTGGATGGCTTCAACTCTTCCAGACAGCTTTGATATACTACT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATCTGGATGGCTTCAACTCTTCCAGACAGCTTTGATATACTACT  592

seq1  CCAGCTTTACCCTAAGCAAGTATTTCTACCATCAGGCACTTATTCTAATT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTTACCCTAAGCAAGTATTTCTACCATCAGGCACTTATTCTAATT  642

seq1  TGTTTCCTAAATGCTTACAATTCATTTCTCAAACTACTAAGCAAAGGACT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTAAATGCTTACAATTCATTTCTCAAACTACTAAGCAAAGGACT  692

seq1  CATTTCTTCTCAAAGAATTCATGTTGGTTGTATAGGTTCATTACCACTCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTCTCAAAGAATTCATGTTGGTTGTATAGGTTCATTACCACTCT  742

seq1  TAAGAAACACAGATTTACCTTAATGCCAATTCTCTTGGTTTCATTTGCAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACACAGATTTACCTTAATGCCAATTCTCTTGGTTTCATTTGCAC  792

seq1  TTACCCGTCTATTTTGTAATTTTTCCTGGGGTTATATGAGCAGAACACCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCGTCTATTTTGTAATTTTTCCTGGGGTTATATGAGCAGAACACCT  842

seq1  ACTCACATCATGTAGAGCACAAATAACTAACCAATAAACAATTCTACTAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACATCATGTAGAGCACAAATAACTAACCAATAAACAATTCTACTAA  892

seq1  AAACTATATGGGGGAACCAATGAGTTTATTGAAGTTAATTTCAAGAGCAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATATGGGGGAACCAATGAGTTTATTGAAGTTAATTTCAAGAGCAT  942

seq1  GAACTGGAATTACTTGTAGGGACAAAGATGCCTCAAACAGCTGAGAAAGC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGAATTACTTGTAGGGACAAAGATGCCTCAAACAGCTGAGAAAGC  992

seq1  CATCCAAGCATCAAGGACATATCACTGGAATTC  1027
      |||||||||||||||||||||||||||||||||
seq2  CATCCAAGCATCAAGGACATATCACTGGAATTC  1025