BAC Information

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BAC

Clone NameB6Ng01-093C01
Chromosome13 (Build37)
Map Location 95,564,888 - 95,566,054
singlet/doubletsinglet
Overlap geneTbca
Upstream geneArsb, Cycs-ps3, Lhfpl2, Scamp1, LOC435378, ENSMUSG00000042857, Ap3b1
Downstream geneOtp, Wdr41, Pde8b, Zbed3, Aggf1, Crhbp, S100z, F2rl1, F2r, Iqgap2, F2rl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093C01.bB6Ng01-093C01.g
ACCDH904698DH904699
length1,1471,051
definitionDH904698|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C01, 5' end.DH904699|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaaaaagcaaaatactgaggagaatctataatataatctagc
attaaaactataggaatagggaaagatgattcagccagtaaatgtgcatg
ccaagtaagcttggtgacctgcgttagctgcctggaaccctcacataagt
ggaagggacaaaatgacggcggaaagttgtcctgtgctctcctctcccat
catgcacaaatacacgtgtatatacacaataacaaattaaaaactggaaa
aatatagatatcatttttttacaattgtaaaccacaatggattttgggaa
ttaatgatatggaaacaaggcatttgttctattaaaaaaaaaaaaaagaa
aaaaaaaaaggtttgctggggtttggaaccagagaatgatcacctcagta
attatcacctcagtaattatcacctcagtaattatcacctcagtaattaa
cagagccacaccaccacagctgtaggaactccccaatcatggaagtctca
cactcattccctctccaacaccagtcagacaagtaactgagaaccaagat
tttatcacaatttaaaaacacaatcaagttctaggttctgtcctgggacc
cacagacactcctccataagtcctcagagcttccgtgtcttgctatggct
tgcttgtggccttcctaacttctgttgaaataatcactaacgcatgctgc
atgctaagaagtaaggcctttagaagttgatcagggatcttacaaagtac
ttcacacagggctggacacctccttgtccttttgtcacagtgctcaaggt
atcactttggtgtcaaaaaggagattctggggccttaaacctgtgaaaat
acttttctgttatttgtaaattgcctagtctcagctgttttgttacagca
gcacattcaagacagaagtgaatggcagcagttaaatacactgagccttt
gctatctatcagcatctgagccagtgatcccacagtcaccttactcagtt
gtctaataacaacatgaaaaagatacactgccaattcatttttcagctag
aaaaatgggcttccacggctagtaactttctaggtcataggtgaatgggt
gaagagaaaattggggtctgtctgcttactccccacgcagaataact
gaattctatttggcctctctgactggggtgagaagaaatcttagtgaact
tttcatcttcacttgcctggagagctaaggatgttgaacaccttttaaag
tgttcaccagccatttgtatggcttccatggaggactttctgctcagtta
cacagttcagttgggttgttcatttacctggtatttagtgttttgagttc
tttgtgtgttctggacactagctctctgttagatacatagctggcaaaaa
tgttctgattctatagcacttgattggccacttcctttgtcatacagaag
catttgggttccatggagattccatttgtcagctgttagtatcagtccct
gggctactggaatcttatctagaaagcccttccatgtgcctataacttgg
agtgaaggcccttctttttcctctaacagtttcagagtgtcaggtcgtag
gatgaggtccttgatctatttggagttgagttgcctgcaagatgctgggt
tacctccctctaagacacttgtcagagagatccatgaggcacccaaaata
acttaggctattatccattactcctgggtgccaaccatgactagagggta
agacccttttgctgaagaccccacacacttcagaaacagaacacacagaa
atcagttttagagacgaccagaaaaactcacctgccagctcactcagcct
gtgcaggctgctggaagagaaaaggcatcttgtggactcccccagcaccg
gcccctgcatgccccaataccgacacaccagacaagatgtgcccactcgt
gaaatagtgacaagactggagaaaccaactgctctcctgattacaactga
ctcatgccccactgggaggggacttaacgtctggtacacaaatacggttg
aagccgtagctatggaaatgatagcccccactgacagcaagggcaattga
tgttgtctttctactatgctgtctgtaaatattatgtttctctcacagtt
gtgctgctccggaccttgtcaaagaaacttctactacagggggtatggtc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_95564888_95566054
seq2: B6Ng01-093C01.b_45_1191 (reverse)

seq1  AGTTATTTCTGCTGTGGGAGTTAAGCAGACAGAACCCCAGATTCTCCTCA  50
      ||||| |||||| |||||   ||||||||||| |||||| ||| | ||| 
seq2  AGTTA-TTCTGC-GTGGGGAGTAAGCAGACAG-ACCCCA-ATT-TTCTCT  45

seq1  TCACACATCACACCTATGACCCTAGGAAAGTTACTTAGCCGTTGGAAGCC  100
      |||| |||  ||||||||| |||| ||||||||| |||||| |||||| |
seq2  TCACCCAT-TCACCTATGA-CCTA-GAAAGTTAC-TAGCCG-TGGAAG-C  89

seq1  CCATTTTTCTTAGCTGAAAAATGAAATTGGCAGTTGTATCTTTTTCATGT  150
      ||||||||| ||||||||||||| ||||||||| ||||||||||||||||
seq2  CCATTTTTC-TAGCTGAAAAATG-AATTGGCAG-TGTATCTTTTTCATGT  136

seq1  TGTTATTAAGACAACTGAGTAAGGTGACTGTGTGAATCACCTGGCTCAGA  200
      ||||||| |||||||||||||||||||||||| | |||| ||||||||||
seq2  TGTTATT-AGACAACTGAGTAAGGTGACTGTG-GGATCA-CTGGCTCAGA  183

seq1  TGCCTGATAGATAGCAAAGGCTCAGTGTATTTAACTGCTGCCATTCACTT  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-CTGATAGATAGCAAAGGCTCAGTGTATTTAACTGCTGCCATTCACTT  232

seq1  CTGTCTTGAATGTGCTGCTGTAACAAAACAGCCTGAGACTAGGCAATTTA  300
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTGTCTTGAATGTGCTGCTGTAACAAAACAG-CTGAGACTAGGCAATTTA  281

seq1  CAAATAACAGAAAAGTATTTTTCACAGGTTTAAGGCCCCAGAATCTCCTT  350
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CAAATAACAGAAAAGTA-TTTTCACAGGTTTAAGGCCCCAGAATCTCCTT  330

seq1  TTTGACACCAAAGTGATACCTTGAGCACTGTGACAAAAGGACAAGGAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACACCAAAGTGATACCTTGAGCACTGTGACAAAAGGACAAGGAGGT  380

seq1  GTCCAGCCCTGTGTGAAGTACTTTGTAAGATCCCTGATCAACTTCTAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCCCTGTGTGAAGTACTTTGTAAGATCCCTGATCAACTTCTAAAG  430

seq1  GCCTTACTTCTTAGCATGCAGCATGCGTTAGTGATTATTTCAACAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTACTTCTTAGCATGCAGCATGCGTTAGTGATTATTTCAACAGAAGT  480

seq1  TAGGAAGGCCACAAGCAAGCCATAGCAAGACACGGAAGCTCTGAGGACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGGCCACAAGCAAGCCATAGCAAGACACGGAAGCTCTGAGGACTT  530

seq1  ATGGAGGAGTGTCTGTGGGTCCCAGGACAGAACCTAGAACTTGATTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGAGTGTCTGTGGGTCCCAGGACAGAACCTAGAACTTGATTGTGT  580

seq1  TTTTAAATTGTGATAAAATCTTGGTTCTCAGTTACTTGTCTGACTGGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTGTGATAAAATCTTGGTTCTCAGTTACTTGTCTGACTGGTGT  630

seq1  TGGAGAGGGAATGAGTGTGAGACTTCCATGATTGGGGAGTTCCTACAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGGGAATGAGTGTGAGACTTCCATGATTGGGGAGTTCCTACAGCT  680

seq1  GTGGTGGTGTGGCTCTGTTAATTACTGAGGTGATAATTACTGAGGTGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGTGTGGCTCTGTTAATTACTGAGGTGATAATTACTGAGGTGATA  730

seq1  ATTACTGAGGTGATAATTACTGAGGTGATCATTCTCTGGTTCCAAACCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGAGGTGATAATTACTGAGGTGATCATTCTCTGGTTCCAAACCCC  780

seq1  AGCAAACCTTTTTTTTTTTCTTTTTTTTTTTTTTAATAGAACAAATGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACCTTTTTTTTTTTCTTTTTTTTTTTTTTAATAGAACAAATGCCT  830

seq1  TGTTTCCATATCATTAATTCCCAAAATCCATTGTGGTTTACAATTGTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCATATCATTAATTCCCAAAATCCATTGTGGTTTACAATTGTAAA  880

seq1  AAAATGATATCTATATTTTTCCAGTTTTTAATTTGTTATTGTGTATATAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATATCTATATTTTTCCAGTTTTTAATTTGTTATTGTGTATATAC  930

seq1  ACGTGTATTTGTGCATGATGGGAGAGGAGAGCACAGGACAACTTTCCGCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTATTTGTGCATGATGGGAGAGGAGAGCACAGGACAACTTTCCGCC  980

seq1  GTCATTTTGTCCCTTCCACTTATGTGAGGGTTCCAGGCAGCTAACGCAGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTTGTCCCTTCCACTTATGTGAGGGTTCCAGGCAGCTAACGCAGG  1030

seq1  TCACCAAGCTTACTTGGCATGCACATTTACTGGCTGAATCATCTTTCCCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAAGCTTACTTGGCATGCACATTTACTGGCTGAATCATCTTTCCCT  1080

seq1  ATTCCTATAGTTTTAATGCTAGATTATATTATAGATTCTCCTCAGTATTT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTATAGTTTTAATGCTAGATTATATTATAGATTCTCCTCAGTATTT  1130

seq1  TGCTTTTTACTGAATTC  1167
      |||||||||||||||||
seq2  TGCTTTTTACTGAATTC  1147