BAC Information

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BAC

Clone NameB6Ng01-093K13
Chromosome13 (Build37)
Map Location 95,110,391 - 95,283,726
singlet/doubletdoublet
Overlap geneENSMUSG00000042857, Ap3b1
Upstream geneHomer1, Jmy, EG619883, Bhmt, Bhmt2, Dmgdh, Arsb, Cycs-ps3, Lhfpl2, Scamp1, LOC435378
Downstream geneTbca, Otp, Wdr41, Pde8b, Zbed3, Aggf1, Crhbp, S100z, F2rl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093K13.bB6Ng01-093K13.g
ACCDH905085DH905086
length5291,043
definitionDH905085|Mus musculus domesticus DNA, BAC clone: B6Ng01-093K13, 5' end.DH905086|Mus musculus domesticus DNA, BAC clone: B6Ng01-093K13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,283,240 - 95,283,726)(95,110,391 - 95,111,437)
sequence
gaattcactccagacaaaaaaagccaatcttgcaaagactaaagagagca
tcaagctacacactgtactctgtccaagcggtccttagcaaactggaagc
aagttccctgtgtaacgcctgctcagggcaacacaccgcctctgacctaa
cagtcctctggctgagggctctgaaggaagacagaggcttcagtcgcata
tctataaaagcagacccatagcaaccacgtggctcagtctgagaacatac
acaagctcactggagacgaggggaaagcggcctacaccaggattcccgtg
cgcccatttatcaaacactgatgagctgagaacagtttctagatatgtct
cgttcttcaaagaatcagttaacaggacatgttttctagggggaacctga
tatgccagatgctaagctctgatagatcttttttttttttttcatagtat
agaatagagtttattcaggggagagggaggggaggagacctaattgtttt
cctaagtaaacaatcaaaattatttaagt
gaattcactctgtagaccaggctgactttgaactcaaagatctgcctgct
tctaccttctgagtgcaggaattaaagctgtgcaccattactgcccaaca
aaatttaacgtttctataatatgagcatgatgtccaagaaagtcatttcc
tgacacaaaaatgataatcatcatatacagaaatcagtgggtatcttaga
attactattgctttgataaaacacctgaccaaaagcaacttggagaggaa
agggtttaatttagcttatacttccatattacagttcatcactgaaggaa
gttaggacaggaactcaaataaggaaggaacctggaggcaggagctgaag
caggagctatggagggatgctgcttactggcttgctcctcatggcttgct
tagcctgttttcttatagaacccaagaccaccagcccaggggtagcacca
cccacagtaggctggccccttccacatcaatcactaatgaagacaatgtc
tttctgctggatcttatggaggctttttttcagttgaggttccttcctct
caaatgactctacttgtgtaacactgacagaaagctagccaacacatatg
gtaacatttgcacactgagtgtaagaatggtgaagggacagaatttcttt
tccttattcactaagatatgccaataatttctgggggctacttggtgcaa
gtgcatttcctaaacatacgctattctgtttctgatttctttgcttggtg
ttcagaaatctatgtgattatcaggttagcgtttgttatctcttttaatt
ggaagttaatccgtcagctttatcagtactattagtggatcgcttttata
actctgtgtggtcatacacatcagtaggtatgggttgaacagagcatttt
agcttttaccatcgcacctgtggtctgcctccatggagaatgctgaagaa
gagagctagagagctgagcgcttttttgtttaataattcgtggttttata
tgtggacttcaaaaaaccacacaaactgtttttggatactgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_95283240_95283726
seq2: B6Ng01-093K13.b_37_524 (reverse)

seq1  TCTCCTCCCCTCCCTCTCCCCTGAATAAACTCTATTCTATACTATGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCCCTCCCTCTCCCCTGAATAAACTCTATTCTATACTATGAAAA  50

seq1  AAAAAAAAAAGATCTATCAGAGCTTAGCATCTGGCATATCAGGTTCCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGATCTATCAGAGCTTAGCATCTGGCATATCAGGTTCCCCC  100

seq1  TAGAAAACATGTCCTGTTAACTGATTCTTTGAAGAACGAGACATATCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAACATGTCCTGTTAACTGATTCTTTGAAGAACGAGACATATCTAG  150

seq1  AAACTGTTCTCAGCTCATCAGTGTTTGATAAATGGGCGCACGGGAATCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTTCTCAGCTCATCAGTGTTTGATAAATGGGCGCACGGGAATCCT  200

seq1  GGTGTAGGCCGCTTTCCCCTCGTCTCCAGTGAGCTTGTGTATGTTCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGGCCGCTTTCCCCTCGTCTCCAGTGAGCTTGTGTATGTTCTCAG  250

seq1  ACTGAGCCACGTGGTTGCTATGGGTCTGCTTTTATAGATATGCGACTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCCACGTGGTTGCTATGGGTCTGCTTTTATAGATATGCGACTGAA  300

seq1  GCCTCTGTCTTCCTTCAGAGCCCTCAGCCAGAGGACTGTTAGGTCAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTCTTCCTTCAGAGCCCTCAGCCAGAGGACTGTTAGGTCAGAGG  350

seq1  CGGTGTGTTGCCCTGAGCAGGCGTTACACAGGGAACTTGCTTCCAGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGTGTTGCCCTGAGCAGGCGTTACACAGGGAACTTGCTTCCAGTTTG  400

seq1  CTAAGGACCGCTTGGACAGAGTACAGTGTGTAGCTTGATGCTCTCTTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGACCGCTTGGACAGAGTACAGTGTGTAGCTTGATGCTCTCTTTAG  450

seq1  TCTTTGC-AGATTGGCTTTTTTTGTCTGGAGTGAATTC  487
      ||||||| ||||||||||||||||||||||||||||||
seq2  TCTTTGCAAGATTGGCTTTTTTTGTCTGGAGTGAATTC  488

seq1: chr13_95110391_95111437
seq2: B6Ng01-093K13.g_70_1112

seq1  GAATTCACTCTGTAGACCAGGCTGACTTTGAACTCAAAGATCTGCCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGACTTTGAACTCAAAGATCTGCCTGCT  50

seq1  TCTACCTTCTGAGTGCAGGAATTAAAGCTGTGCACCATTACTGCCCAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTTCTGAGTGCAGGAATTAAAGCTGTGCACCATTACTGCCCAACA  100

seq1  AAATTTAACGTTTCTATAATATGAGCATGATGTCCAAGAAAGTCATTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAACGTTTCTATAATATGAGCATGATGTCCAAGAAAGTCATTTCC  150

seq1  TGACACAAAAATGATAATCATCATATACAGAAATCAGTGGGTATCTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAAAAATGATAATCATCATATACAGAAATCAGTGGGTATCTTAGA  200

seq1  ATTACTATTGCTTTGATAAAACACCTGACCAAAAGCAACTTGGAGAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTATTGCTTTGATAAAACACCTGACCAAAAGCAACTTGGAGAGGAA  250

seq1  AGGGTTTAATTTAGCTTATACTTCCATATTACAGTTCATCACTGAAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTAATTTAGCTTATACTTCCATATTACAGTTCATCACTGAAGGAA  300

seq1  GTTAGGACAGGAACTCAAATAAGGAAGGAACCTGGAGGCAGGAGCTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGACAGGAACTCAAATAAGGAAGGAACCTGGAGGCAGGAGCTGAAG  350

seq1  CAGGAGCTATGGAGGGATGCTGCTTACTGGCTTGCTCCTCATGGCTTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCTATGGAGGGATGCTGCTTACTGGCTTGCTCCTCATGGCTTGCT  400

seq1  TAGCCTGTTTTCTTATAGAACCCAAGACCACCAGCCCAGGGGTAGCACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTGTTTTCTTATAGAACCCAAGACCACCAGCCCAGGGGTAGCACCA  450

seq1  CCCACAGTAGGCTGGCCCCTTCCACATCAATCACTAATGAAGACAATGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGTAGGCTGGCCCCTTCCACATCAATCACTAATGAAGACAATGTC  500

seq1  TTTCTGCTGGATCTTATGGAGGCTTTTTTTCAGTTGAGGTTCCTTCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTGGATCTTATGGAGGCTTTTTTTCAGTTGAGGTTCCTTCCTCT  550

seq1  CAAATGACTCTACTTGTGTAACACTGACAGAAAGCTAGCCAACACATATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGACTCTACTTGTGTAACACTGACAGAAAGCTAGCCAACACATATG  600

seq1  GTAACATTTGCACACTGAGTGTAAGAATGGTGAAGGGACAGAATTTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACATTTGCACACTGAGTGTAAGAATGGTGAAGGGACAGAATTTCTTT  650

seq1  TCCTTATTCACTAAGATATGCCAATAATTTCT-GGGGCTACTT-GTGCAA  698
      |||||||||||||||||||||||||||||||| |||||||||| ||||||
seq2  TCCTTATTCACTAAGATATGCCAATAATTTCTGGGGGCTACTTGGTGCAA  700

seq1  GTGCATTTCCTAAACATACGCTATTCTGTTTCTGATTTCTTTTGCTTGGT  748
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTGCATTTCCTAAACATACGCTATTCTGTTTCTGATTTC-TTTGCTTGGT  749

seq1  GTTCAGAAATCTATGTGATTATCAGGTTAGCGTTTGTTATCTCTTTTAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAAATCTATGTGATTATCAGGTTAGCGTTTGTTATCTCTTTTAAT  799

seq1  TGGAAGTTAATCCGTCAGCTTTATCAGTACTATTAGTGGATCGCTTTTTA  848
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGGAAGTTAATCCGTCAGCTTTATCAGTACTATTAGTGGATCGC-TTTTA  848

seq1  TAAACTCTGTGTGGTCATACACATCAGTAGGTTATGGGTTGAACAGAGCC  898
      | ||||||||||||||||||||||||||||| |||||||||||||||| |
seq2  T-AACTCTGTGTGGTCATACACATCAGTAGG-TATGGGTTGAACAGAG-C  895

seq1  ATTTTAGCTTTTACCATCGGCACTGTGGTCTGCACTCAGTGAAGAATGCT  948
      |||||||||||||||||||   ||||||||||| |||  || ||||||||
seq2  ATTTTAGCTTTTACCATCGCACCTGTGGTCTGC-CTCCATGGAGAATGCT  944

seq1  GATGAAGTGAGCTAGAGAGCTGAGCGGCTTTATTG-TTATAAAATCGGTG  997
      || |||| ||||||||||||||||| ||||| ||| |||  || |||  |
seq2  GAAGAAGAGAGCTAGAGAGCTGAGC-GCTTTTTTGTTTAATAATTCGTGG  993

seq1  TTTTATATGTGGATCTTAAAAAAACACACAAAACTG-TTTTGAGTACTGG  1046
      |||||||||||||  | |||||| ||||| |||||| |||||  ||||||
seq2  TTTTATATGTGGACTTCAAAAAACCACAC-AAACTGTTTTTGGATACTGG  1042

seq1  A  1047
      |
seq2  A  1043