BAC Information

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BAC

Clone NameB6Ng01-093N14
Chromosome13 (Build37)
Map Location 56,942,140 - 57,093,625
singlet/doubletdoublet
Overlap geneTrpc7
Upstream geneH2afy, BC027057, Neurog1, Cxcl14, LOC100040926, AU042651, Il9, Fbxl21, Lect2, Tgfbi, Smad5, EG627415
Downstream geneLOC100040995, Spock1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093N14.bB6Ng01-093N14.g
ACCDH905222DH905223
length341369
definitionDH905222|Mus musculus domesticus DNA, BAC clone: B6Ng01-093N14, 5' end.DH905223|Mus musculus domesticus DNA, BAC clone: B6Ng01-093N14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,942,140 - 56,942,480)(57,093,251 - 57,093,625)
sequence
tcaaatcatctccaaggcatgaaaaccctttcatcagttccttcagatgg
gaactgttacatccttgtttttaagtataggggcctgaggctcaagatgt
tcctagcttgcagccagttatgcaaagtaactgtttatgacaaggtctgg
tcttcaacctgggctaatttgactttaaatctaatattttaaactttccc
ctatatttctaaaaggtatatttgaaatccaagagattagccaaagcagg
ggtgggtggtgatttctccaggtctacatgggtggggcctcacagctgaa
catgaagtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgta
cacatgtgtgcagtgcccatggtagccagaagagggtgctagatcccttg
gagctggagtcatatgtggctatgggctcagaaaaggagcaagagttctt
actttgagccatgtctccagccccacagatctacaaaatgttatctaata
aatagccacttgatggctactgctagttccctctgcagccacttcttaga
tatgtgaccatttgcatacaataagactttctcaagcctctgttgactca
tggtttggcagagtaatgctcttgtatgatttaaaatctacccagggact
gggtgtggtggtatatctagcacttaggagagagacaggtaggtgtgtgt
gtgtgtgtgtgtgtgatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_56942140_56942480
seq2: B6Ng01-093N14.b_57_397

seq1  TCAAATCATCTCCAAGGCATGAAAACCCTTTCATCAGTTCCTTCAGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCATCTCCAAGGCATGAAAACCCTTTCATCAGTTCCTTCAGATGG  50

seq1  GAACTGTTACATCCTTGTTTTTAAGTATAGGGGCCTGAGGCTCAAGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTTACATCCTTGTTTTTAAGTATAGGGGCCTGAGGCTCAAGATGT  100

seq1  TCCTAGCTTGCAGCCAGTTATGCAAAGTAACTGTTTATGACAAGGTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCTTGCAGCCAGTTATGCAAAGTAACTGTTTATGACAAGGTCTGG  150

seq1  TCTTCAACCTGGGCTAATTTGACTTTAAATCTAATATTTTAAACTTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAACCTGGGCTAATTTGACTTTAAATCTAATATTTTAAACTTTCCC  200

seq1  CTATATTTCTAAAAGGTATATTTGAAATCCAAGAGATTAGCCAAAGCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTTCTAAAAGGTATATTTGAAATCCAAGAGATTAGCCAAAGCAGG  250

seq1  GGTGGGTGGTGATTTCTCCAGGTCTACATGGGTGGGGCCTCACAGCTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTGGTGATTTCTCCAGGTCTACATGGGTGGGGCCTCACAGCTGAA  300

seq1  CATGAAGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  341
      |||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  341

seq1: chr13_57093251_57093625
seq2: B6Ng01-093N14.g_70_444 (reverse)

seq1  ATATCACACACACACACACACACACACCTACCTGTCTCTCTCCTAAGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACACACACACACACACACACACCTACCTGTCTCTCTCCTAAGTGC  50

seq1  TAGATATACCACCACACCCAGTCCCTGGGTAGATTTTAAATCATACAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATACCACCACACCCAGTCCCTGGGTAGATTTTAAATCATACAAGA  100

seq1  GCATTACTCTGCCAAACCATGAGTCAACAGAGGCTTGAGAAAGTCTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTACTCTGCCAAACCATGAGTCAACAGAGGCTTGAGAAAGTCTTATT  150

seq1  GTATGCAAATGGTCACATATCTAAGAAGTGGCTGCAGAGGGAACTAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCAAATGGTCACATATCTAAGAAGTGGCTGCAGAGGGAACTAGCAG  200

seq1  TAGCCATCAAGTGGCTATTTATTAGATAACATTTTGTAGATCTGTGGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATCAAGTGGCTATTTATTAGATAACATTTTGTAGATCTGTGGGGC  250

seq1  TGGAGACATGGCTCAAAGTAAGAACTCTTGCTCCTTTTCTGAGCCCATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACATGGCTCAAAGTAAGAACTCTTGCTCCTTTTCTGAGCCCATAG  300

seq1  CCACATATGACTCCAGCTCCAAGGGATCTAGCACCCTCTTCTGGCTACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATATGACTCCAGCTCCAAGGGATCTAGCACCCTCTTCTGGCTACCA  350

seq1  TGGGCACTGCACACATGTGGAATTC  375
      |||||||||||||||||||||||||
seq2  TGGGCACTGCACACATGTGGAATTC  375