BAC Information

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BAC

Clone NameB6Ng01-097N07
Chromosome13 (Build37)
Map Location 44,044,786 - 44,209,207
singlet/doubletdoublet
Overlap geneLOC100039432
Upstream genePhactr1, Tbc1d7, Gfod1, Sirt5, Nol7, Ranbp9, LOC637627, Ccdc90a, Rnf182, LOC100039403, Cd83
Downstream geneA730030A06, EG637868, EG667157, Jarid2, Dtnbp1, Hsp25-ps1, LOC100039502
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097N07.bB6Ng01-097N07.g
ACCDH908094DH908095
length1,1631,131
definitionDH908094|Mus musculus domesticus DNA, BAC clone: B6Ng01-097N07, 5' end.DH908095|Mus musculus domesticus DNA, BAC clone: B6Ng01-097N07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,208,024 - 44,209,207)(44,044,786 - 44,045,927)
sequence
gaattcactctatcaaatagcattacaaaatgtatgaaaaaaatctatga
aaaaaatccccttttcctgccctttctatgcctgaattccataattctga
ggcaatttaaatcattttagtatcaattcctgcatttacttctactttcc
aaggaacattcttattacttactgttttgtttttgtttttgtttttgttg
tttgatagtaacggtcaactttcttatgtgtatttttaaatatacataag
aactcttgcacagaaaacgtcatagctatccacttcttctatatataact
atagacactcctctttcccacgttctcctcacggagctatatgaaaatac
ctgattatattatgattagatgtttgtattacaactgtaaaagctttgtt
cacagcagcagtagcacctggtctatggtttgattttctttctttcacaa
ctctttgtttttctgggaattacggaacaaacaaaagcaatagctttgtt
tctctatttgtcccatcttctatgtccctacaataacattcctatcagat
tccccagctatctgcatcctaacacaggtgtctgcttcagcatctcggag
actgctttcactattctctgccagagactctctattcctggacaccatgg
gtttactgaggaaggaagagcactgtgtggtagaagagcccatggaggcg
gtgaatatgacattctaggccttgcgtatttcaagatgtctccgtttaac
cttcacatttgattgatctttctgtgggaacagaatttgcagttgagtag
ttcgtctctgttcttctgaggcattgctttaaccatctcacctccagcgt
gggctgtagagaagcccacagatggccttgattctccatcctgtgtaagg
aacttgtttcagaaagcttttctgaagtttagagttcctcactaagggaa
tctcacatgcccctttgttctgtgcactcttatctttcattctcccatca
tgaatgaagaaagctaaaagcgacgtttctgatggtctgcctgcaaccac
tggaaaaggtgacagaaggagcctgatagcctaagggatgaagatcctga
ctctaattggagacctactgggaaactgacctttgatgaggggcaatcgc
ctgagaaggttct
gaattctttgattcctctagcgtggatgtccactgagccctaggtgtctt
tctctctgtatctacctcccagcatgcctagttgtttgttcattatcgtg
gattctggggacctcagggttgcctgccacacacttttgttgaccgacct
gtctctccagccccagcactcaatagttctatgtgaaaataatagctgtg
gaatagctgttgtttcagccacgagcgtcatttgttctacatccagtact
gtccaatgcggtacaggtggagcttgctcttacagattcctcattctggg
acccaatcacccagggcttgagaatacttgaaaaaaaaaagtcctaagtg
tgtacataattttccctatcatcattctttaaacaataagagataactgc
tattgacacagcctttacattgtagtaggtgtcctaagtaaccaaggggc
aaccagaggaggctatgcatgggttctgtgctaacactgagccattttat
gtgagtcccgagcatgtgaggattgcattatctaaatgggaatccggatg
ctgtagtagggggggatgactgtagtcagtccaactctttctttgcagtg
acctatcttttcagaactatcagactgatgtgataattaccgtttgcctc
acgtaaataaaagataattattttccctacactcaccaagcgctgagtgc
aatccaaggaacggtctctgtgtaagcacacaggcctcgtaataatgcca
tcagccttgtattgataattaatgactgtttcatagaatacggagactga
aggctggcactttaaaacaaattatcccttttcttttcccttaaaactgc
tcctgatagataactgccagacctcagcgatgttgtgaaataaacctgca
gacactctgagatcagagtgacactctatgcctggctctcacactagcag
ctggtgcggggctggttctagcgtcaataacatgagctatgaataagact
ccgttccctgtcacaagccttgtctgttattaccaaacctgaacttccgc
taattgtaggatcagccacccgtggcagatagatgtccacgtcccatgcg
gtggtttcattcaaaggctctattgggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_44208024_44209207
seq2: B6Ng01-097N07.b_46_1208 (reverse)

seq1  AGAACCTTCTCTAGCCTGGATTGCCCCTCCTCAATGGCTCGTGTTTTCCA  50
      |||||||||||  ||   ||||||||||| |||| || ||  |||| |||
seq2  AGAACCTTCTCAGGC---GATTGCCCCTCATCAAAGG-TC-AGTTTCCCA  45

seq1  GTTCGTTTCTTCCATCTCAGCTTCTGGATCCTCATCCCTCTCTGGCTTCT  100
      ||  ||    ||||  | ||  || ||||| ||||||||   | |  | |
seq2  GTAGGT---CTCCA-ATTAGAGTCAGGATCTTCATCCCT---TAGGCTAT  88

seq1  CA-GCTTCTTCTTGTCATCCTTTTTCCAGTGTTTGCAGGCAGACACTCAG  149
      || ||| |||| |||||  | |||||||||| ||||||||||||  ||||
seq2  CAGGCTCCTTC-TGTCA--CCTTTTCCAGTGGTTGCAGGCAGACCATCAG  135

seq1  AACGTTCGCTTTTAGCCTTTCTTCATTCATGATGGGAAGAATGGAAGGAT  199
      ||   |||||||||| |||||||||||||||||||| ||||| ||| |||
seq2  AAACGTCGCTTTTAG-CTTTCTTCATTCATGATGGG-AGAAT-GAAAGAT  182

seq1  AAGGAGTGCACAGAAACAAAGGGGCATGTGAGATTCCCCTTAGTGAGGAA  249
      || |||||||||| ||||||||||||||||||||| ||||||||||||||
seq2  AA-GAGTGCACAG-AACAAAGGGGCATGTGAGATT-CCCTTAGTGAGGAA  229

seq1  CTCTAAAACTTTCAGAAAAGCTTTCTGAAACAAGTTCCTTACACAGGATG  299
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAA--CTTCAGAAAAGCTTTCTGAAACAAGTTCCTTACACAGGATG  277

seq1  GAGAATCAAGGCCATCTGTGGGCTTCTCTACAG-CCACGCTGGAGGTGAG  348
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAGAATCAAGGCCATCTGTGGGCTTCTCTACAGCCCACGCTGGAGGTGAG  327

seq1  ATGGTTAAAGCAATGCCTCAGAAGAACAGAGACGAACTACTCAACTGCAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAAAGCAATGCCTCAGAAGAACAGAGACGAACTACTCAACTGCAA  377

seq1  ATTCTGTTCCCACAGAAAGATCAATCAAATGTGAAGGTTAAACGGAGACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTCCCACAGAAAGATCAATCAAATGTGAAGGTTAAACGGAGACA  427

seq1  TCTTGAAATACGCAAGGCCTAGAATGTCATATTCACCGCCTCCATGGGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAATACGCAAGGCCTAGAATGTCATATTCACCGCCTCCATGGGCT  477

seq1  CTTCTACCACACAGTGCTCTTCCTTCCTCAGTAAACCCATGGTGTCCAGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACCACACAGTGCTCTTCCTTCCTCAGTAAACCCATGGTGTCCAGG  527

seq1  AATAGAGAGTCTCTGGCAGAGAATAGTGAAAGCAGTCTCCGAGATGCTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGAGTCTCTGGCAGAGAATAGTGAAAGCAGTCTCCGAGATGCTGA  577

seq1  AGCAGACACCTGTGTTAGGATGCAGATAGCTGGGGAATCTGATAGGAATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACACCTGTGTTAGGATGCAGATAGCTGGGGAATCTGATAGGAATG  627

seq1  TTATTGTAGGGACATAGAAGATGGGACAAATAGAGAAACAAAGCTATTGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTAGGGACATAGAAGATGGGACAAATAGAGAAACAAAGCTATTGC  677

seq1  TTTTGTTTGTTCCGTAATTCCCAGAAAAACAAAGAGTTGTGAAAGAAAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTCCGTAATTCCCAGAAAAACAAAGAGTTGTGAAAGAAAGA  727

seq1  AAATCAAACCATAGACCAGGTGCTACTGCTGCTGTGAACAAAGCTTTTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAACCATAGACCAGGTGCTACTGCTGCTGTGAACAAAGCTTTTAC  777

seq1  AGTTGTAATACAAACATCTAATCATAATATAATCAGGTATTTTCATATAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAATACAAACATCTAATCATAATATAATCAGGTATTTTCATATAG  827

seq1  CTCCGTGAGGAGAACGTGGGAAAGAGGAGTGTCTATAGTTATATATAGAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGTGAGGAGAACGTGGGAAAGAGGAGTGTCTATAGTTATATATAGAA  877

seq1  GAAGTGGATAGCTATGACGTTTTCTGTGCAAGAGTTCTTATGTATATTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGATAGCTATGACGTTTTCTGTGCAAGAGTTCTTATGTATATTTA  927

seq1  AAAATACACATAAGAAAGTTGACCGTTACTATCAAACAACAAAAACAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACACATAAGAAAGTTGACCGTTACTATCAAACAACAAAAACAAAA  977

seq1  ACAAAAACAAAACAGTAAGTAATAAGAATGTTCCTTGGAAAGTAGAAGTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACAAAACAGTAAGTAATAAGAATGTTCCTTGGAAAGTAGAAGTA  1027

seq1  AATGCAGGAATTGATACTAAAATGATTTAAATTGCCTCAGAATTATGGAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGGAATTGATACTAAAATGATTTAAATTGCCTCAGAATTATGGAA  1077

seq1  TTCAGGCATAGAAAGGGCAGGAAAAGGGGATTTTTTTCATAGATTTTTTT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCATAGAAAGGGCAGGAAAAGGGGATTTTTTTCATAGATTTTTTT  1127

seq1  CATACATTTTGTAATGCTATTTGATAGAGTGAATTC  1184
      ||||||||||||||||||||||||||||||||||||
seq2  CATACATTTTGTAATGCTATTTGATAGAGTGAATTC  1163

seq1: chr13_44044786_44045927
seq2: B6Ng01-097N07.g_70_1200

seq1  GAATTCTTTGATTCCTCTAGCGTGGATGTCCACTGAGCCCTAGGTGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATTCCTCTAGCGTGGATGTCCACTGAGCCCTAGGTGTCTT  50

seq1  TCTCTCTGTATCTACCTCCCAGCATGCCTAGTTGTTTGTTCATTATCGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTATCTACCTCCCAGCATGCCTAGTTGTTTGTTCATTATCGTG  100

seq1  GATTCTGGGGACCTCAGGGTTGCCTGCCACACACTTTTGTTGACCGACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGGGGACCTCAGGGTTGCCTGCCACACACTTTTGTTGACCGACCT  150

seq1  GTCTCTCCAGCCCCAGCACTCAATAGTTCTATGTGAAAATAATAGCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCCAGCCCCAGCACTCAATAGTTCTATGTGAAAATAATAGCTGTG  200

seq1  GAATAGCTGTTGTTTCAGCCACGAGCGTCATTTGTTCTACATCCAGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCTGTTGTTTCAGCCACGAGCGTCATTTGTTCTACATCCAGTACT  250

seq1  GTCCAATGCGGTACAGGTGGAGCTTGCTCTTACAGATTCCTCATTCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAATGCGGTACAGGTGGAGCTTGCTCTTACAGATTCCTCATTCTGGG  300

seq1  ACCCAATCACCCAGGGCTTGAGAATACTTGAAAAAAAAAAGTCCTAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAATCACCCAGGGCTTGAGAATACTTGAAAAAAAAAAGTCCTAAGTG  350

seq1  TGTACATAATTTTCCCTATCATCATTCTTTAAACAATAAGAGATAACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATAATTTTCCCTATCATCATTCTTTAAACAATAAGAGATAACTGC  400

seq1  TATTGACACAGCCTTTACATTGTAGTAGGTGTCCTAAGTAACCAAGGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACACAGCCTTTACATTGTAGTAGGTGTCCTAAGTAACCAAGGGGC  450

seq1  AACCAGAGGAGGCTATGCATGGGTTCTGTGCTAACACTGAGCCATTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAGGAGGCTATGCATGGGTTCTGTGCTAACACTGAGCCATTTTAT  500

seq1  GTGAGTCCCGAGCATGTGAGGATTGCATTATCTAAATGGGAATCCGGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCCCGAGCATGTGAGGATTGCATTATCTAAATGGGAATCCGGATG  550

seq1  CTGTAGTAGGGGGGGATGACTGTAGTCAGTCCAACTCTTTCTTTGCAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTAGGGGGGGATGACTGTAGTCAGTCCAACTCTTTCTTTGCAGTG  600

seq1  ACCTATCTTTTCAGAACTATCAGACTGATGTGATAATTACCGTTTGCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATCTTTTCAGAACTATCAGACTGATGTGATAATTACCGTTTGCCTC  650

seq1  ACGTAAATAAAAGATAATTATTTTCCCTACACTCACCAAGCGCTGAGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAAATAAAAGATAATTATTTTCCCTACACTCACCAAGCGCTGAGTGC  700

seq1  AATCCAAGGAACGGTCTCTGTGTAAGCACACAGGCCTCGTAATAATGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAGGAACGGTCTCTGTGTAAGCACACAGGCCTCGTAATAATGCCA  750

seq1  TCAGCCTTGTATTGATAATTAATGACTGTTTCATAGAATACGGAGACTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTTGTATTGATAATTAATGACTGTTTCATAGAATACGGAGACTGA  800

seq1  AGGCTGGCAC-TTAAAACAAATTATCCC-TTTCTTTCCCCTTAAAACTGC  848
      |||||||||| ||||||||||||||||| ||||||| |||||||||||||
seq2  AGGCTGGCACTTTAAAACAAATTATCCCTTTTCTTTTCCCTTAAAACTGC  850

seq1  TCCTGATTAGATAACTGCCAGACCTCAGCGATGTTGTGAAATAAACCTGC  898
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGA-TAGATAACTGCCAGACCTCAGCGATGTTGTGAAATAAACCTGC  899

seq1  AGACACTCTGAGATCAGAGTGACACTCTATGCCTGGCTCTCACACTAGCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTCTGAGATCAGAGTGACACTCTATGCCTGGCTCTCACACTAGCA  949

seq1  GGCTGGTGGCGGGGCTGGTTCTAGCGCCCATTAGCATGAGCTAATGAATA  998
       |||||| ||||||||||||||||||  || || |||||||| |||||||
seq2  -GCTGGT-GCGGGGCTGGTTCTAGCG-TCAATAACATGAGCT-ATGAATA  995

seq1  AGGACTCCGTTCCCTGTCACAGCCCTTGTCTGTTATTAGCCAAAACCTGA  1048
      | |||||||||||||||||||  |||||||||||||||  | ||||||||
seq2  A-GACTCCGTTCCCTGTCACAAGCCTTGTCTGTTATTA--CCAAACCTGA  1042

seq1  ACTTCAGCTTAATTGTAGAAACCAGCCCACCCATGGCAGATAGAGGGCAC  1098
      ||||| || |||||||||  | ||| |||||| ||||||||||| | |  
seq2  ACTTCCGC-TAATTGTAG-GATCAG-CCACCCGTGGCAGATAGATGTCCA  1089

seq1  GGTCCCCATTGCTGTGGTTGCATTCAAAGTGCT-AATTGGGGGGA  1142
       |||||   ||| |||||| ||||||||| |||  ||||||||||
seq2  CGTCCC--ATGCGGTGGTTTCATTCAAAG-GCTCTATTGGGGGGA  1131