BAC Information

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BAC

Clone NameB6Ng01-103I14
Chromosome13 (Build37)
Map Location 20,229,062 - 20,230,073
singlet/doubletsinglet
Overlap genenone
Upstream geneAmph, Tcrg-V4, LOC624071, Tcrg, Tcrg-C, Stard3nl, Epdr1, Sfrp4, Txndc3, A530099J19Rik, Gpr141, LOC432730
Downstream geneElmo1, LOC100040226, LOC665381, LOC665386, Aoah, Olfr1370, Olfr1369-ps1, Olfr42
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103I14.bB6Ng01-103I14.g
ACCDH912093DH912094
length2001,012
definitionDH912093|Mus musculus domesticus DNA, BAC clone: B6Ng01-103I14, 5' end.DH912094|Mus musculus domesticus DNA, BAC clone: B6Ng01-103I14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cctgggactaaaccagcagtcaaagaaaacacatggtgggattcatggct
ctagctgcatatgtagcagagaatggcctagtcggtcattgatgggagga
gaggcccttggtcctgtgaaggctctattgtctagtatagggaaatgcca
ggaccaggtagcgggagtgggtgggatgggaagcagggggaagggggagg

gaattccatgggctaaaggtaccaggagagcaagcacgtccagaaagaag
tgtgaaagcagagcctagctctctctacacttcccttggtgagaagctgg
gagctagacataacccctggtaggcagatagctagagagaagatccctgg
ttaagtaataaaggtgatgaacgtccaagatgaccagcttctccttcacc
tttctgacttgagacaaaggcctggtgaatgaaaaagagaaaagacacag
ttgcttctaggtatggtggaggagaaggtaactgtagaaatgagggagaa
tacagaaaggggcagaagcaaggacatttagagagtccagaataaagatg
gacagacagaacaaggccatgtgaggagagagtagggaagagagcataag
aggagctgccatctaacaaagttggggttgggccaagagactgaccatga
atcaaaaatcacatagccaaatggcagaattatatagggaccagaggagc
tggggtaaaggaagcccagcccagtttctggcctcaagaagtttaggata
aggggtagggtttgccagccaggtggagcctattaagattggatgctggg
agaacctggcagccagggtccactttgatatgttaatcagcatctcagcc
tttggtcctgggtttaacacctagcagtaaatgccttgcatgcttttgtt
ccccaccagtgagctagactggctcaacaagttcaagccctgatcaggac
atgttacacatcagttgtcagccaatcaatgagcctatcttccatcaaac
tgaacaaccctacgttagggaaggagaattcttcagagacttaaaagtcc
ccagccctcgagaagagactggatctttcagcttcccccttacagagggt
ctttttcctgtgtgtctgctgcatgtatgcatttcctgatccctagaaaa
acaattttcctcactgctgactttgtctgatgttgtctgcaatatcttga
aattctctgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_20229062_20230073
seq2: B6Ng01-103I14.g_70_1081 (reverse)

seq1  CAGCAGAGAAATTTCAAGATATTGCAGACAACATCAGACAAAGTCAGCAG  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAG-AATTTCAAGATATTGCAGACAACATCAGACAAAGTCAGCAG  49

seq1  TTGAGGAAAATTG-TTTTCTAGGGATCAGGAAATGCATACATGCAGCAGA  99
       |||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  -TGAGGAAAATTGTTTTTCTAGGGATCAGGAAATGCATACATGCAGCAGA  98

seq1  CACACAGG-AAAAGACCCTCTGTAAGGGGGAAGCTGAAAGATCCAGTCTC  148
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGGAAAAAGACCCTCTGTAAGGGGGAAGCTGAAAGATCCAGTCTC  148

seq1  TTCTCGAGGGCTGGGGACTTTTAAGTCTCTGAAGAATTCTCCTTCCCTAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGAGGGCTGGGGACTTTTAAGTCTCTGAAGAATTCTCCTTCCCTAA  198

seq1  CGTAGGGTTGTTCAGTTTGATGGAAGATAGGCTCATTGATTGGCTGACAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGGGTTGTTCAGTTTGATGGAAGATAGGCTCATTGATTGGCTGACAA  248

seq1  CTGATGTGTAACATGTCCTGATCAGGGCTTGAACTTGTTGAGCCAGTCTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTGTAACATGTCCTGATCAGGGCTTGAACTTGTTGAGCCAGTCTA  298

seq1  GCTCACTGGTGGGGAACAAAAGCATGCAAGGCATTTACTGCTAGGTGTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTGGTGGGGAACAAAAGCATGCAAGGCATTTACTGCTAGGTGTTA  348

seq1  AACCCAGGACCAAAGGCTGAGATGCTGATTAACATATCAAAGTGGACCCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGGACCAAAGGCTGAGATGCTGATTAACATATCAAAGTGGACCCT  398

seq1  GGCTGCCAGGTTCTCCCAGCATCCAATCTTAATAGGCTCCACCTGGCTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCAGGTTCTCCCAGCATCCAATCTTAATAGGCTCCACCTGGCTGG  448

seq1  CAAACCCTACCCCTTATCCTAAACTTCTTGAGGCCAGAAACTGGGCTGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCTACCCCTTATCCTAAACTTCTTGAGGCCAGAAACTGGGCTGGG  498

seq1  CTTCCTTTACCCCAGCTCCTCTGGTCCCTATATAATTCTGCCATTTGGCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTACCCCAGCTCCTCTGGTCCCTATATAATTCTGCCATTTGGCT  548

seq1  ATGTGATTTTTGATTCATGGTCAGTCTCTTGGCCCAACCCCAACTTTGTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATTTTTGATTCATGGTCAGTCTCTTGGCCCAACCCCAACTTTGTT  598

seq1  AGATGGCAGCTCCTCTTATGCTCTCTTCCCTACTCTCTCCTCACATGGCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCAGCTCCTCTTATGCTCTCTTCCCTACTCTCTCCTCACATGGCC  648

seq1  TTGTTCTGTCTGTCCATCTTTATTCTGGACTCTCTAAATGTCCTTGCTTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTGTCTGTCCATCTTTATTCTGGACTCTCTAAATGTCCTTGCTTC  698

seq1  TGCCCCTTTCTGTATTCTCCCTCATTTCTACAGTTACCTTCTCCTCCACC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTTTCTGTATTCTCCCTCATTTCTACAGTTACCTTCTCCTCCACC  748

seq1  ATACCTAGAAGCAACTGTGTCTTTTCTCTTTTTCATTCACCAGGCCTTTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAGAAGCAACTGTGTCTTTTCTCTTTTTCATTCACCAGGCCTTTG  798

seq1  TCTCAAGTCAGAAAGGTGAAGGAGAAGCTGGTCATCTTGGACGTTCATCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGTCAGAAAGGTGAAGGAGAAGCTGGTCATCTTGGACGTTCATCA  848

seq1  CCTTTATTACTTAACCAGGGATCTTCTCTCTAGCTATCTGCCTACCAGGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTACTTAACCAGGGATCTTCTCTCTAGCTATCTGCCTACCAGGG  898

seq1  GTTATGTCTAGCTCCCAGCTTCTCACCAAGGGAAGTGTAGAGAGAGCTAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTCTAGCTCCCAGCTTCTCACCAAGGGAAGTGTAGAGAGAGCTAG  948

seq1  GCTCTGCTTTCACACTTCTTTCTGGACGTGCTTGCTCTCCTGGTACCTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCTTTCACACTTCTTTCTGGACGTGCTTGCTCTCCTGGTACCTTT  998

seq1  AGCCCATGGAATTC  1012
      ||||||||||||||
seq2  AGCCCATGGAATTC  1012